Diksha Haksar1, Mostafa Asadpoor2, Torben Heise1, Jie Shi3, Saskia Braber2, Gert Folkerts2, Lluis Ballell3, Janneth Rodrigues3, Roland J Pieters1. 1. Department of Chemical Biology & Drug Discovery, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands. 2. Division of Pharmacology, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands. 3. Diseases of the Developing World (DDW), Global Health R&D, GlaxoSmithKline, Tres Cantos, 28760 Madrid, Spain.
Abstract
Shiga toxin is an AB5 toxin produced by Shigella species, while related toxins are produced by Shiga toxin-producing Escherichia coli (STEC). Infection by Shigella can lead to bloody diarrhea followed by the often fatal hemolytic uremic syndrome (HUS). In the present paper, we aimed for a simple and effective toxin inhibitor by comparing three classes of carbohydrate-based inhibitors: glycodendrimers, glycopolymers, and oligosaccharides. We observed a clear enhancement in potency for multivalent inhibitors, with the divalent and tetravalent compounds inhibiting in the millimolar and micromolar range, respectively. However, the polymeric inhibitor based on galabiose was the most potent in the series exhibiting nanomolar inhibition. Alginate and chitosan oligosaccharides also inhibit Shiga toxin and may be used as a prophylactic drug during shigella outbreaks.
Shiga toxin is an AB5 toxin produced by Shigella species, while related toxins are produced by Shiga toxin-producing Escherichia coli (STEC). Infection by Shigella can lead to bloody diarrhea followed by the often fatal hemolytic uremic syndrome (HUS). In the present paper, we aimed for a simple and effective toxin inhibitor by comparing three classes of carbohydrate-based inhibitors: glycodendrimers, glycopolymers, and oligosaccharides. We observed a clear enhancement in potency for multivalent inhibitors, with the divalent and tetravalent compounds inhibiting in the millimolar and micromolar range, respectively. However, the polymeric inhibitor based on galabiose was the most potent in the series exhibiting nanomolar inhibition. Alginate and chitosan oligosaccharides also inhibit Shiga toxin and may be used as a prophylactic drug during shigella outbreaks.
Bacterial dysentery
or shigellosis has been identified as one of
the major causes of mortality in children under 5 years of age.[1] Shigellosis is caused by gram-negative bacteria
from the following four species of Shigella: Shigella dysenteriae, Shigella flexneri,Shigella boydii, and Shigella sonnei through the fecal–oral route. The pathology can include bloody
diarrhea (hemorrhagic colitis) followed by the often fatal hemolytic
uremic syndrome (HUS). HUS can occur if the pathogen also produces
the Shiga toxin (Stx). The toxin is produced by S.
dysenteriae serotype 1, but closely related toxins
Stx1 and Stx2 are produced by Shiga toxin-producing Escherichia coli (STEC) or enterohemorrhagic E. coli (EHEC), where Stx2 has been reported to cause
more severe infections.[2] STEC outbreaks
are mostly food-borne with the largest ever reported in Germany (2011)
linked to sprout consumption.[3]The
Shiga toxin is an AB5 toxin composed of the toxic
A subunit and a pentameric B subunit that is responsible for the binding
of the toxin to its cell surface receptor globotriaosylceramide (Gb3;
Galα1-4Galβ1-4Glcβ1-ceramide, also known as CD77
or the Pk blood group antigen).[4] Each of
the five B subunits can bind three Gb3 molecules simultaneously.[5,6] After the initial bloody diarrhea, the toxin enters the bloodstream
by poorly understood mechanisms.[7] The ample
presence of Gb3 molecules in the kidney targets the toxin to this
location. Once endocytosed, the toxin induces multiple signaling pathways
leading to blockage of protein synthesis and induction of apoptosis[8] and HUS. STEC infections are treated with antibiotics,
although their use is controversial with respect to their ability
to increase the risk of HUS.[9] The recent
emergence of toxin-producing strains of S. flexneri and S. sonnei points toward increased
future morbidity and mortality.[10−19] As an alternative to antibiotics, synthetic molecules based on Gb3
have been explored as potential prophylactic treatment for STEC.[20] Synsorb Pk, silicon dioxide coupled to synthetic
Pk, showed promising results in the trapping of toxins and preventing
toxic effects on renal cells.[21] However,
a subsequent clinical trial was unsuccessful in diminishing diarrhea-associated
HUS possibly due to late administration of the drug to the GI tract,
while the toxin was already active systemically.[22] Recommendations were made for intervention in the circulation.
This approach was explored in several cases with antibodies and nanobodies,
as summarized recently.[23] Smaller dendritic
molecules were also explored in this respect. The soluble STARFISH
inhibitor with a decavalent display of the Gb3trisaccharide, reported
by Bundle et al., exhibited subnanomolar inhibition of Stx1, with
large potency gains over the divalent analogue and the Pk trisaccharide
itself.[24] A modification of the STARFISH
named DAISY was observed to be effective against both Stx1 and Stx2
with nanomolar inhibition and in vivo activity in
EHEC orally infectedmice by subcutaneous injection 24 h after infection.[25] Several related SUPERTWIG structures (based
on Gb3 conjugated to carbosilane dendrimers), developed by Nishikawa
et al., were also identified as effective neutralizers of Stx with
a dependency on their valency and structure.[26] A hexavalent structure provided protection after intravenous injections
starting 3 days after oral infection.In the present paper,
three classes of carbohydrate-containing
structures were investigated: dendritic-synthesized multivalent inhibitors,
glycopolymers, and natural oligosaccharides. As the ligand, we chose
to explore the potential of the disaccharide (Galα1-4Galβ;
galabiose) as a possible monovalent alternative to Gb3-based inhibitors.
The intention here was to explore what the minimal structural requirements
for potent toxin inhibition would be by minimizing the ligand and
the multivalent scaffold. For the dendrimers, ease of preparation
was central to the selection of di- and tetravalent dendrimers utilized.
Polymeric scaffolds were selected for potency comparison. For the
polymer scaffold, hyperbranched polyglycerol (hPG) was used for their
easy synthesis, high functionalization, biocompatibility, and low in vivo toxicity.[27] A polyalkyne
and a polyazide variant of hPG were prepared for their conjugation
by employing the copper-catalyzed alkyne azide cycloaddition (CuAAC)
conjugations. In addition to the synthesized compounds, commercially
available oligosaccharides such as nontoxic food grade alginate, chitosan,
and fructo- and galacto-oligosaccharides [alginate oligosaccharide
(AOS), chitosan oligosaccharide (COS), galactose oligosaccharide (GOS),
fructose oligosaccharide (FOS)][28] were
tested for Stx inhibition. These could serve as an even more viable
practical alternative that could be a part of a preventative food-based
approach during outbreaks with a focus on the gastrointestinal phase
of the toxin-producing Shigella pathogenicity.
Results
For the synthesis of the monovalent galabiose reagent, galactose
pentaacetate was used as the common precursor for the synthesis of
the glycosyl donor and acceptor (Scheme ). Glycosyl donor 1a was synthesized
in three steps by thioglycoside preparation as the first step followed
by silyl protection of the sugar. Glycosyl donor 1b was
synthesized by azidation using trimethylsilyl azide and benzoyl protection.
Trifluoromethanesulfonic anhydride-mediated glycosylation afforded
the disaccharide 1c in moderate yields. Deprotection
was performed over two steps without purification followed by acetylation
to obtain 1d which was used for conjugation with various
dendrimers.
Reagents
and conditions: (i)
HSPh, BF3·Et2O, DCM, r.t., 16 h, 90%; NaOMe,
MeOH, r.t. 90% (ii) tBu2Si(OTf)2, pyridine, DMF, −40°C, >90% (iii) TBDMSOTf, DMAP,
pyridine,
r.t. 70% (iv) TMSN3, SnCl4, DCM, 95%; NaOMe,
MeOH, r.t., 16 h, 100% (v) BzCl, pyridine, DCM, −80°C,
2 h, 50% (vi) Tf2O, Ph2SO, TTBP, DCM, −60°C,
1 h, 72% (vii) NaOMe, MeOH; HF, pyridine; Ac2O, pyridine,
63% (viii) NaOH, MeOH, 90%.Building block
3,5-dihydroxybenzoic acid was used as the starting
material for the synthesis of all four dendrimers (Figure ). 2a and 2c were synthesized using previously reported procedures.[29,30] Divalent 2b was conveniently prepared by coupling methyl
3,5-bis(2-aminoethoxy)benzoate to propargyl chloroformate and was
obtained in 88% yield. Amide coupling of 2a to dodecane-1,12-diamine
using BOP gave tetravalent dendrimer 2d in 60% yield.
Dendrimers (2a, 2b, 2c, and 2d) were conjugated to 1d by CuAAC and deprotected
to obtain final compounds 3, 4, 5, and 6 (Figure ) in good yields.
Figure 1
Di- and tetravalent dendrimers.
Figure 3
Dendrimeric- and polymeric-galabiose conjugates.
Di- and tetravalent dendrimers.Inhibition of STx1B (0.1 μg/mL) binding to a GB3
covered
surface by compounds from left to right, 9 (blue), 8 (red), 1e (black), and 5 (white).Dendrimeric- and polymeric-galabiose conjugates.Glycidol, a reactive hydroxy-epoxide, was used
as an AB2 monomer, and polymerization was initiated using
tris(hydroxymethyl)propane
(TMP). TMP was partially deprotonated and used as an initiator for
the anionic polymerization carried out by slow monomer addition and
yielding hPG-OH of ca. 9.4 kDa with 125 OH end groups, calculated
using inverse-gated carbon and proton NMR.[31] Azidation of the hPG was performed in two steps by first substituting
the hydroxy groups of the hPG with the more reactive mesyl groups
followed by azide substitution using sodium azide.[32] Mesyl substitution of the hPG was calculated at 8% (ca.
10 mesyl end groups per molecule) using proton NMR, and complete substitution
with azide groups was confirmed by the absence of the mesyl protons
(1H NMR) and the appearance of the azide stretching in
the infrared spectra (IR) at 2110 cm–1. Propargylation
of hPG was performed in a single step using propargyl bromide in 72%
yield.[33] The polymer was calculated to
be 16% functionalized, which means ca. 20 propargyl end groups per
molecule based on proton NMR, and the IR spectra further confirmed
this via the 2110 cm–1 peak (see the Supporting Information).hPG azide was
conjugated by CuAAC to globotriose-NAc-propargyl
(7, Scheme ) to obtain 8 (Figure ) in 80% yield. Similarly, conjugation of 1d to hPG-propargyl following deprotection yielded final compound 9 (Figure ) in 75% yield over two steps. Final polymers 8 and 9 were characterized by 1H NMR and also by IR to
check for the absence of the azide and alkyne stretching peaks, respectively.
Scheme 2
Synthesis of Hyperbranched Polymers
Reagents and conditions:
(i)
MsCl, TEA, DMF, 0 °C–r.t., 16 h, 88%; NaN3,
DMF, 60 °C, quant. (ii) NaH, KI, propargyl bromide, DMF, 0 °C–r.t.,
72%.
Synthesis of Hyperbranched Polymers
Reagents and conditions:
(i)
MsCl, TEA, DMF, 0 °C–r.t., 16 h, 88%; NaN3,
DMF, 60 °C, quant. (ii) NaH, KI, propargyl bromide, DMF, 0 °C–r.t.,
72%.Previously, inhibitors were tested for
inhibition in ELISA assays
using immobilization of the B subunit of Stx1 (Stx1B).[24] In contrast, we used an assay in which FSL-Gb3
was immobilized instead of the toxin (Figure S2), as this was deemed more realistic since in vivo the toxin is also free to move. FSL-GB3 is comprised of a functional
component (F) which is GB3, conjugated via an O(CH2)3NH spacer (S) to an activated adipate derivative of dioleoylphosphatidylethanolamine
(L). Monovalent 1e was used as the reference in the ELISA
and, as expected, showed millimolar inhibition of the toxin with an
IC50 of approx. 5 mM. Divalent 3 and 4 also inhibited the toxin in the millimolar range (1 and
1.2 mM respectively) (Table ). Clearly, the small variation in the spacer length between
dendrimer 2a and 2b did not cause any significant
variation in potency. It was anticipated that if the divalent ligands
bridge between sites 1 and 2 on a single toxin subunit,[6] this would be more easily possible with the longer
spacer of 4. A stronger enhancement of the inhibition
was observed with the tetravalent compounds 5 and 6 as both showed micromolar inhibition (20 and 13 μM
respectively). Here again, the toxin did not discriminate between
the elongated and more flexible dendrimer 2d backbone
with respect to 2c (Figure ).
Table 1
Results of Inhibition
in the Stx1B
ELISA Assaya
entry
Construct
ligand
valency (% functionalization
of polymer)
IC50 (μM)
rel.pot.b
rel. pot. per sugarc
1
1e
galabiose
1
4968 ± 1232
4968
1
2
3
galabiose
2
1070 ± 283
4.6
2.3
3
4
galabiose
2
1245 ± 169
4
2
4
5
galabiose
4
19.9 ± 2.4
250
62.5
5
6
galabiose
4
13.5 ± 2.6
367
92
6
8
globotriose
10 (8%)
2.8 ± 0.2
1,774
187
7
9
galabiose
20 (16%)
0.0083 ± 0.0006
598,554
29,928
Determined
in an ELISA-like assay
with Stx1B (0.1 μg/mL) and wells coated with Gb3.
Relative to the potency of galabiose
for 3, 4, 5, 6, and 9.
Relative
potency divided by the
valency.
Figure 2
Inhibition of STx1B (0.1 μg/mL) binding to a GB3
covered
surface by compounds from left to right, 9 (blue), 8 (red), 1e (black), and 5 (white).
Determined
in an ELISA-like assay
with Stx1B (0.1 μg/mL) and wells coated with Gb3.Relative to the potency of galabiose
for 3, 4, 5, 6, and 9.Relative
potency divided by the
valency.We expected both
compounds to bridge between the strongest of the
three binding sites per subunit, the so-called site 2,[34] of the same pentamer separated by ca. 30 Å.[6] For the decavalent hPG-Gb3 polymeric inhibitor 8, low micromolar inhibition was seen (IC50 = 3
μM). Indeed, the compound was more potent than the tetravalent 5 and 6 but not much and the inherently stronger
trisaccharide ligand it contains could easily be responsible for this
difference. Gratifyingly, the more highly substituted hPG-galabiose
conjugate 9 was much more potent with an IC50 of 8 nM and a relative potency per sugar of ca. 30,000. These data
make it the first nanomolar Stx inhibitor based on the disaccharidegalabiose to the best of our knowledge.A number of natural
or synthesized oligosaccharides were subsequently
tested for activity at a maximal nontoxic concentration of 2% (Figure ).[35,36] Chitosan oligosaccharide (COS) is a cationic polymer obtained from
crustaceans and consists of glucosamine repeating units and has several
promising applications.[37] COS (degree of
acetylation: ≥95%) showed a 71% inhibition of the Stx1B with
inhibitory effects seen as low as a 0.5% COS concentration (Figure ). AOS, another naturally
occurring polyuronic saccharide, is composed of β-d-mannuronic acid and α-l-guluronic acid.[38] AOS have, among others, antitumor, antioxidative,
immunoregulatory, and anti-inflammatory activity.[39] AOS did show 51% inhibition at a concentration of 0.5%.
Curiously, higher AOS concentrations reduced inhibition. FOS and GOS
did not inhibit the toxin. Lactose was used as a negative control
and did not show any activity.
Figure 4
Structures of natural and synthetic inhibitors
of Stx.
Figure 5
Stx1B binding inhibition by COS.
Structures of natural and synthetic inhibitors
of Stx.Stx1B binding inhibition by COS.In order to evaluate the potential toxicity of the most effective
Stx inhibitor, polymer 9, toxicity tests were undertaken.
Different concentrations of glycopolymer 9 (1, 10, and
100 nM) did not impair T84 cell viability after 24 h exposure as indicated
by the MTT assay, while 10% ethanol (positive control) significantly
reduced the cell viability (Figure a). Furthermore, as depicted in Figure b, 1, 10, and 100 nM of glycopolymer 9 did not significantly alter the transepithelial electrical
resistance (TEER) values compared to untreated cells after 24 h, whereas
10% ethanol strongly decreased the TEER values. TEER values (transepithelial
electrical resistance) indicate the barrier integrity of epithelial
cells.
Figure 6
Effect of glycopolymer 9 on intestinal cell viability
and integrity. (a) T84 cells grown on 96-well plates were exposed
to 1, 10, and 100 nM glycopolymer 9 or 10% ethanol (positive
control) for 24 h, and cell viability was measured by the MTT reduction
assay. The MTT values were presented as the percentage MTT released
by nontreated T84 cells as mean ± SEM of three independent experiments
each performed in triplicate. (b) T84 cells grown on transwell inserts
exposed to 1, 10, and 100 nM glycopolymer 9 or 10% ethanol
(positive control) for 24 h, and TEER was measured as described in
the Experimental Section. The TEER values
are presented as mean (Ω·cm2) ± SEM of
three independent experiments each performed in triplicate. ** = P < 0.001 compared to control. **** = P < 0.0001 compared to control).
Effect of glycopolymer 9 on intestinal cell viability
and integrity. (a) T84 cells grown on 96-well plates were exposed
to 1, 10, and 100 nM glycopolymer 9 or 10% ethanol (positive
control) for 24 h, and cell viability was measured by the MTT reduction
assay. The MTT values were presented as the percentage MTT released
by nontreated T84 cells as mean ± SEM of three independent experiments
each performed in triplicate. (b) T84 cells grown on transwell inserts
exposed to 1, 10, and 100 nM glycopolymer 9 or 10% ethanol
(positive control) for 24 h, and TEER was measured as described in
the Experimental Section. The TEER values
are presented as mean (Ω·cm2) ± SEM of
three independent experiments each performed in triplicate. ** = P < 0.001 compared to control. **** = P < 0.0001 compared to control).
Discussion
and Conclusions
A growing number of Shigella infections
contain the deadly Shiga toxin, and the related STEC is also still
a major threat without a proper therapeutic approach. In this study,
we aimed for a simple and effective toxin inhibitor by comparing three
classes of carbohydrate-based inhibitors: glycodendrimers, glycopolymers,
and oligosaccharides. The glycodendrimers needed at least a tetravalent
ligand to reach significant inhibition. One reason could be that it
requires bridging[40] between the two highest
affinity sites (sites 2) of neighboring toxin subunits for a significant
inhibitory effect. The smaller divalent compounds were too short to
bridge ca. 30 Å. It is likely that in addition
to the chelation binding mode, aggregation of the toxin also takes
place, as previously noted,[41] and also
for the related cholera toxin.[42,43] Of the two glycopolymers,
it is striking that the more highly functionalized 9 was
much more potent than 8, despite having the weaker galabiose
ligand. Clearly, the high density of binding sites helps in inhibition
as seen for the related cholera toxin inhibition with similar polymers;[44,45] however, with three binding sites per subunit, that is, 15 in total,
the effects are more dramatic than those for the cholera toxin with
one binding site per subunit. Prior works, both theoretical and practical
involving the Shiga-like toxin, have clearly indicated that the avidity
effects as seen here are caused by intrinsic inter- and intramolecular
recognition events, but on top of that, there is an important combinatorial
factor that describes the probabilities of binding events. This factor
is very important and favorable and was shown to increase rapidly
for higher valency systems, provided that the geometry of the multivalent
ligand is appropriate for the target. In the case at hand, the particle-like
nature of the polymer is particularly suitable for toxins in comparison
with other polymers.[44] Furthermore, the
polymers were both ca. 10 kDa, but the ligand density is vastly different
(valencies of 10 vs 20 for 8 and 9). Clearly,
the statistical possibilities for higher ligand density 9 are far greater and can overcome the lower intrinsic binding potency
of the disaccharide versus trisaccharide ligand.[52]Shigella spp. are
highly infective
bacteria. 10–100 microbes are enough to cause infection that
could become fatal, especially when it produces the toxin, which is
also the case for STEC. The initial diarrhea followed by the toxin
moving into circulation provides a challenge for therapy. It takes ca. 5–9 days between the initial gastroenteritis
until HUS occurs.[46] In this time window,
a GI-based agent, for example, a food-grade polysaccharide, such as,
COS, can be beneficial. This is true also as a preventative, in case
of an outbreak which can happen with Shigella. In order to prevent systemic diseases, that is, HUS, a soluble
nontoxic multivalent glycan with sufficient potency will likely be
helpful. As such, a further optimized dendrimer or the glycopolymer 9 based on hPG can be used. hPGs can be prepared on a large
scale in an economical manner and have also been used in circulation.[47] The utility of hPG is also well established
in terms of safety and biocompatibility. We have also previously used
a hPG backbone to target the cholera toxin and the flu virus with
good results.[44,48]
Experimental
Section
Plasmid Construction, Protein Expression, and Protein Purification
The Stx1B expression plasmid was constructed by using the Gateway
recombinant cloning kit (Thermo Fisher, Spain). Briefly, a synthetic
DNA cassette (Invitrogen, Spain) that encodes residues 21–89
of Stx1B (GenBank: AAA98348.1) with a C-terminal 6×
His tag was first inserted into an entry plasmid pENTR1A through restriction
sites Dra I and Xho I. The resultant
plasmid Stx1B-His-pENTR1A together with a destination vector pDEST
14 was further subjected to the Gateway LR Clonase cloning reaction
to achieve the final protein expression construct Stx1B-His-pDEST14
following the manufacturer’s instructions.Protein expression
was carried out using E. coli BL21
cells transformed with the plasmid Stx1B-His-pDEST14. The above E. coli cells were grown in LB broth media containing
100 mg/mL ampicillin at 37 °C until OD450 reached
0.6, and then, IPTG was added to the culture at a final concentration
of 1 mM to induce the expression of recombinant proteins at room temperature
for 16 h. At the end of IPTG induction, E. coli cells were immediately lysed in the culture using a B-PER direct
bacterial protein extraction kit (Thermo Fisher, Spain) with the supplementation
of the protease inhibitor (EDTA-free), DNase I, and lysozyme following
the manufacturer’s instructions. After centrifugation for 10
min at 12,000 rpm at 4 °C, the supernatant was collected for
further protein purification.Protein purification was performed
using a home-made column packed
with HisPur Ni-NTA resin (Thermo Fisher, Spain) according to the manufacturer’s
instructions. After the column was washed with an equilibration buffer
(20 mM sodium phosphate, 300 mM sodium chloride, 10 mM imidazole,
pH 7.4), it was then loaded with the above supernatant containing
6× His tagged Stx1B at 4 °C for 1 h. Unbound proteins were
removed from the column by using a washing buffer (20 mM sodium phosphate,
300 mM sodium chloride, 20 mM imidazole, pH 7.4). Finally, 6×
His tagged Stx1B was eluted from the column using an elution buffer
(20 mM sodium phosphate, 500 mM sodium chloride, and 300 mM imidazole,
pH 7.4) and later confirmed by SDS-PAGE (Figure S1). Before applying for the later binding assay, imidazole
residues in the eluted proteins were removed using 10 kDa molecular
weight cut off protein concentrators (Thermo Fisher, Spain) and a
buffer containing 20 mM sodium phosphate and 500 mM sodium chloride.
Shiga Toxin Inhibition Assay
A (Stx1B ELISA) 96-well
plate (Nunc PolySorp) was coated with a solution of FSL-GB3 (50 μL,
2 μg/mL) in phosphate-buffered saline (PBS) for 3 h at room
temperature. Unattached GB3 was removed by washing with PBS (0.2%
BSA), and the remaining binding sites of the surface were blocked
with BSA (1%) for 1 h, followed by washing with PBS (0.2% BSA). Samples
of Stx1B (50 μL, 0.1 μg/mL) and inhibitors were transferred
to the GB3-coated plate and incubated at r.t. for 1 h followed by
washing with PBS (0.2% BSA). HisProbe-HRP (4 mg/mL, 1:2000 dilution,
100 μL/well) was incubated for 0.5 h followed by washing with
PBS (0.2% BSA).[49] The HRP activity was
measured using the 1-Step Ultra TMB-ELISA substrate solution (100
μL/well) for a maximum of 10 min. After quenching with H2SO4, the absorbance in each well was measured at
450 nm. Compounds 3, 4, 5, 6, 8, and 9 were tested at least
twice in duplicate or triplicate, whereas compound 1e was tested once. Inhibition data from the experiments were averaged
and fitted in GraphPad Prism 8.3.0 with a nonfixed Hill-slope.
Cell Culture
Human colonic epithelial T84 cells (ATCC
CCL-248) were cultured in Dulbecco’s modified Eagle’s
medium: nutrient mixture F-12 (DMEM/F-12; Gibco, Invitrogen, Carlsbad,
CA, USA) (1:1) supplemented with 10% fetal calf serum (FCS; Gibco),
penicillin (100 U/mL), and streptomycin (100 g/mL) (Biocambrex) and
maintained at 37 °C in a humidified incubator with 5% CO2. Τ84 cells were grown on plastic culture flasks (75
cm2) at a density of 3 × 106 cells/mL.
After 7 days, T84 cells were seeded on 0.3 cm2 high pore
density polyethylene terephthalate membrane transwell inserts with
0.4 μm pores (Falcon, BD Biosciences, Franklin Lakes, NJ, USA)
placed in a 24-well plate (density of 3 × 105 cells/insert)
or in 96-well microtiter plates (Costar 3614, Corning, NY, USA) at
a density of 3 × 104 cells/well. Cells were passaged
by addition of trypsin ethylenediaminetetraacetic acid (EDTA) at 100%
confluency every week. The experiments were performed at passage number
51–55 on fully confluent monolayers with TEER values >1000
Ω·cm2.
Oligosaccharides
Fructo-oligosaccharides
(FOS) isolated
from chicory were obtained from Orafti (Wijchen, The Netherlands)
(purity >97%). Galacto-oligosaccharides (GOS) (Vivinal GOS Powder,
purity >70%) produced from lactose were provided by FrieslandCampina
(Amersfoort, The Netherlands). AOS prepared by degradation of algin
(purity >85%) and chitosan oligosaccharides (COS) derived from
rich
marine biological sources (shrimp & crab shells) (purity >90%)
were both purchased from BZ Oligo Biotech Co., Ltd. (Qingdao, Shandong,
China). All oligosaccharide solutions were freshly prepared through
dissolution in DMEM/F12, and their pH was adjusted to pH = 7.2–7.4.
TEER Measurement
For evaluating the epithelial integrity
of the T84 monolayer, TEER values were measured using a Millicell-ERS
Volt-Ohm-meter (Millipore, Temecular, CA, USA). As described above,
T84 cells were seeded at a density of 3 × 105 cells/insert
and cultured for 3 weeks. The inserts were placed in a 24-well plate
with 300 μL of medium at the apical compartment and 700 μL
of medium at the basolateral compartment. Different concentrations
of the Glycopolymer 9 (1, 10 and 100 nM) were added to
the apical compartment of the transwell inserts. Transwell inserts
of T84 cells, treated with medium, were considered as the control
group. The TEER values were measured before and 24 h after exposure
to different concentrations of Glycopolymer 9 incubated
at 37 °C in 5% CO2. The TEER was expressed as Ω·cm2.
Viability—MTT Assay
Cell viability was measured
by MTT [3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide]
reduction assay (Sigma-Aldrich, St. Louis, Mo, USA). T84 cells were
seeded on a flat-bottomed 96-well plate at a density of 3 × 104
cells/well and grown for 7 days until they reached 100% confluency.
Thereafter, cells were exposed to three concentrations of glycopolymer 9 (1, 10, and 100 nM), and 10% ethanol was used as positive
control. The wells with medium (no treatment) were considered as the
control group. After a 24 h incubation at 37 °C in 5% CO2, the medium was removed, and 120 μL of MTT working
solution [20 μL MTT (5 mg/mL) and 100 μL medium] was added
to each well and incubated for 2 h under the same conditions. Finally,
DMSO was added to lyse the cells and dissolve the purple-blue sediment.
After 5 min of mild shaking, the absorbance value of each well was
measured at 595 nm using a Glomax Discover microplate reader. The
viability of the T84 cells was calculated based on the following equation:
(mean absorbance of treatment cells/mean absorbance of control cells) ×
100.
Statistical Analysis
Data were reported as mean values
± SEM of three independent experiments (n =
3) routinely performed in triplicate (3 wells/condition). Results
were analyzed using Prism 8.0 GraphPad software (GraphPad, San Diego,
CA, USA). Statistical significance was determined using one-way ANOVA
followed by Bonferroni post-hoc test. Differences were considered
statistically significant when P < 0.05.
Chemistry
Chemicals were obtained from commercial sources
and were used without further purification unless noted otherwise.
The solvents were obtained as synthesis grade and stored on molecular
sieves (4 Å). TLC was performed on Merck-precoated silica plates.
Spots were visualized by UV light and 10% H2SO4 in MeOH. Microwave reactions were carried out in a Biotage microwave
initiator (300W, Uppsala, Sweden). The microwave power was limited
by temperature control once the desired temperature was reached. Sealed
vessels of 2–5 and 10–20 mL were used. 1H
NMR, HSQC, COSY (600 MHz), and 13C (151 MHz) were performed
on a Bruker 600 spectrometer. Infrared (IR) spectroscopy was performed
using a universal attenuated total reflectance (UATR) accessory of
a PerkinElmer Spectrum Two FT-IR spectrometer. High-resolution mass
spectrometry analysis was recorded using an Agilent 6560 Ion Mobility
Q-TOF LC/MS instrument. Analytical HPLC and Preparative HPLC runs
were performed on a Shimadzu 20A HPLC system. Analytical HPLC was
performed using a Dr Maisch GmBh C18-AQ column (5 μm) at a flow
rate of 0.5 mL/min. The used buffers were H2O (buffer A)
and CH3CN (buffer B). Runs were performed using a standard
protocol: 2–100% gradient buffer B in 35 min; UV-absorption
was measured at 254 nm. For Preparative HPLC, a Waters XBridge BEH
Prep Amide column (5 μm, 250 × 10 mm) at a flow rate of
2.4 mL/min was used. Runs were performed using a standard protocol:
95–50% gradient buffer B in 60 min. UV-absorption was measured
at 254 and 210 nm. For commercial oligosaccharides, AOS (food grade)
was purchased from Qingdao Bz Oligo Biotech Co. Ltd. COS (9012-76-4)
with a degree of deacetylation ≥95%. GOS was purchased from
Friesland Campina (Vivinal GOS powder, 69%). Bis-alkyne 2a(29) and Tetra-alkyne 2c(30) were synthesized according to the reported procedures,
with the spectral data in agreement with the reported values.
General
CuAAC Procedure for the Synthesis of Multivalent Galabiose
Compounds 3, 4, 5, and 6
All tested compounds were >95% pure by HPLC.
The
alkyne (2a, 2b, 2c, 2d, and 1 equiv) was dissolved in DMF followed by the addition of the
ligand 1d (1.2 equiv). Copper sulfate pentahydrate (0.1
equiv) was dissolved in water separately and added to the reaction
mixture. Sodium ascorbate (0.3 equiv) was also dissolved in water
separately and added to the reaction mixture. The reaction was performed
at 80 °C in the microwave for 1 h. The reaction mixture was extracted
using EtOAc and water, followed by column purification (6% MeOH in
DCM) to obtain the purified compound which was further subjected to
deacetylation as described below.
General Procedure for the
Deacetylation Reaction
The
peracetylated compound was dissolved in anhydrous methanol, followed
by addition of a catalytic amount of an aqueous NaOH solution (1 M)
and stirred at room temperature. The reaction was monitored by TLC.
Upon completion of the reaction, the mixture was neutralized by the
addition of Dowex marathon resin. The solvent was evaporated, and
the crude mixture was purified by preparative HPLC to obtain the pure
product (1e, 3, 4, 5, and 6) in >80% yields.
Azide 1c
Compound 1a (2.00
g, 3.13 mmol, 1 equiv), diphenyl sulfoxide (1.2 g, 6.0 mmol, 2.6 equiv),
and 2,4,6-tris-tert-butylpyrimidine (2.232 g, 9.0
mmol, 3.0 equiv) were dissolved in anhydrous DCM (45 mL) under an
atmosphere of argon. Activated molecular sieves (3 Å) were added.
The solution was then cooled to −40 °C, and trifluoromethanesulfonic
anhydride (500 μL, 3 mmol, 1.3 equiv) was added. The mixture
was stirred for 10 min, and galactose acceptor 1b (2.261
g, 4.373 mmol, 1.4 equiv) was added as a solution in anhydrous DCM
(40 mL). The reaction was stirred for ca. 1.5 h at
−40 °C and then quenched by addition of triethylamine
(5 mL, excess). The mixture was diluted with DCM (100 mL) and washed
with 1 M HCl and saturated aqueous sodium bicarbonate. The organic
layer was dried with NaSO4, filtered, and concentrated in vacuo. Purification was done by column chromatography
(0–20% EtOAc in petroleum ether) to yield the product (1.655
g, 1.58 mmol, 50%). 1H NMR (600 MHz, CDCl3):
δ 8.09 (dd, J = 8.1, 1.4 Hz, 2H, 2 × CH
Bz ortho), 8.04 (dd, J = 8.3, 1.3 Hz, 2H, 2×
CH Bz ortho), 7.93 (dd, J = 8.2, 1.4 Hz, 2H, 2×
CH Bz ortho), 7.62–7.56 (m, 1H, CH Bz para), 7.50 (dddd, J = 8.8, 6.1, 3.0, 1.3 Hz, 2H, 2× CH Bz para), 7.46
(t, J = 7.8 Hz, 2H, 2× CH Bz meta), 7.36 (td, J = 7.8, 3.7 Hz, 4H, 4× CH Bz meta), 5.69 (dd, J = 10.5, 8.6 Hz, 1H, H-2), 5.46 (dd, J = 10.5, 2.4 Hz, 1H, H-3), 5.02 (d, J = 3.1 Hz,
1H, H′-1), 4.83–4.76 (m, 2H, H-1, H-6a), 4.68 (dd, J = 12.1, 7.3 Hz, 1H, H-6b), 4.41 (d, J = 2.5 Hz, 1H, H-4), 4.38 (d, J = 2.4 Hz, 1H, H′-4),
4.24–4.16 (m, 3H, H′-2, H-5, H′-6a), 4.12–4.07
(m, 2H, H′-3, H′-5), 4.05 (dd, J =
12.7, 1.9 Hz, 1H, H′-6b), 1.03 (s, 9H, SiC(CH3)3), 1.00 (s, 9H, SiC(CH3)3), 0.97 (s,
9H, SiC(CH3)3), 0.86 (s, 9H, SiC(CH3)3), 0.19 (s, 3H, SiCH3), 0.17 (s, 3H, SiCH3), 0.08 (s, 3H, SiCH3), 0.04 (s, 3H, SiCH3). 13C NMR (151 MHz, CDCl3): δ 166.15
(C=O, Bz), 165.82 (C=O, Bz), 165.12 (C=O, Bz),
133.60 (CH, Bz para), 133.36 (CH, Bz para), 133.21 (CH, Bz para),
130.01 (2× CH, Bz ortho), 129.83 (2× CH, Bz ortho), 129.80
(2× CH, Bz ortho), 129.78 (C Bz), 128.94 (C Bz), 128.67 (C Bz),
128.57 (2× CH, Bz meta), 128.43 (2× CH, Bz meta), 128.38
(2× CH, Bz meta), 101.45 (C′-1), 88.38 (C-1), 75.69 (C′-5),
75.05 (C′-4), 75.04 (C-4), 73.17 (C-3), 70.94 (C′-3),
70.04 (C′-2), 69.17 (C′-5), 68.68 (C-2), 67.02 (C′-6),
64.12 (C-6), 27.46 (SiC(CH3)3), 27.36 (SiC(CH3)3), 26.23
(SiC(CH3)3), 26.21 (SiC(CH3)3), 23.41 (2× SiC(CH3)3), 18.36 (SiC(CH3)3), 18.22 (SiC(CH3)3), −3.91 (SiCH3),
−4.23 (SiCH3), −4.35 (SiCH3), −4.66 (SiCH3).
Azide 1d
Compound 1c (1655
mg, 1.58 mmol 1 equiv) was solved in MeOH (30 mL), and an excess of
K2CO3 was added. The reaction was stirred at
r.t. for 16 h and then filtered and concentrated in vacuo. The crude product was dissolved in EtOAc and extracted with aqueous
NaHCO3, and the organic layer was separated, dried with
NaSO4, filtered, and concentrated again in vacuo. The product was purified using column chromatography (10–50%
EtOAc in petroleum ether) to yield the product (1034 mg, 1.41 mmol,
89%).The debenzoylated product (332 mg, 0.452 mmol, 1 equiv) was dissolved
in DCM (5 mL), and HF-Pyridine (70%, 0.4 mL) was added dropwise at
r.t. under continuous argon flow. The reaction was stirred for 2 h
and quenched by addition of solid CaCl2 (99 mg, 0.904 mmol,
2 equiv), pyridine (10 mL, 124 mmol, 272 equiv), Ac2O (5
mL, 53 mmol, 117 equiv), and DMAP (3 mg, 0.02 mmol, 0.05 equiv). The
reaction was stirred for 16 h at r.t. and then diluted with EtOAc
and washed with saturated, aqueous K2CO3. The
organic phase was dried with NaSO4, filtered, and concentrated in vacuo. The product was purified using silica gel flash
chromatography using a gradient of 40–100% EtOAc in petroleum
ether (154 mg, 0.232 mmol, 51% (over 3 steps)). The spectral data
was in accordance with published data.[50]1H NMR (600 MHz, CDCl3): δ 5.53 (dd, J = 3.4, 1.3 Hz, 1H, H′-4), 5.33 (dd, J = 11.0, 3.4 Hz, 1H, H′-3), 5.16 (dd, J =
11.0, 3.7 Hz, 1H, H′-2), 5.12 (dd, J = 10.7,
8.6 Hz, 1H, H-2), 4.99 (d, J = 3.7 Hz, 1H, H′-1),
4.83 (dd, J = 10.7, 2.7 Hz, 1H, H-3), 4.63 (d, J = 8.6 Hz, 1H, H-1), 4.45 (ddd, J = 7.6,
5.8, 1.3 Hz, 1H, H′-5), 4.40 (dd, J = 11.4,
6.9 Hz, 1H, H-6a), 4.12 (dd, J = 11.3, 6.1 Hz, 1H,
H-6b), 4.10–4.04 (m, 3H, H′6ab; H-4), 3.87 (t, J = 6.5 Hz, 1H, H-5), 2.09 (s, 3H, CH3 Ac), 2.07
(s, 3H, CH3 Ac), 2.05 (s, 3H, CH3 Ac), 2.04
(s, 3H, CH3 Ac), 2.04 (s, 3H, CH3 Ac), 2.00 (s, 3H, CH3 Ac), 1.95 (s, 3H, CH3 Ac). 13C NMR
(151 MHz, CDCl3): δ 170.45 (C=O, Ac), 170.37
(C=O, Ac), 170.32 (C=O, Ac), 170.27 (C=O, Ac),
169.98 (C=O, Ac), 169.66 (C=O, Ac), 168.90 (C=O,
Ac), 98.97 (C′-1), 88.11 (C-1), 76.27 (C-4), 74.03 (C-5), 72.40
(C-3), 68.30 (C′-2), 67.88 (C-2), 67.67 (C′-4), 67.18
(C′-5), 67.07 (C′-3), 61.81 (C-6), 60.42 (C′-6),
20.76 (CH3, Ac), 20.62 (CH3, Ac), 20.58 (CH3, Ac), 20.54 (CH3, Ac), 20.51 (CH3,
Ac), 20.47 (CH3, Ac).
Azide 1e
Compound 1d was
deprotected using the general procedure described above to obtain
the final compound 1e in 90% yield. The spectral data
was in accordance with published data.[51]1H NMR (600 MHz, MeOD): δ 4.94 (d, J = 3.7 Hz, 1H, H′-1), 4.52 (d, J = 8.4 Hz,
1H, H-1), 4.18 (t, J = 6.2 Hz, 1H, H-5), 3.99 (d, J = 3.0 Hz, 1H, H-4), 3.88 (d, J = 3.2
Hz, 1H, H′-4), 3.85–3.71 (m, 6H, H′-2, H′-3,
H′-5, H′-6ab, H-6a), 3.65 (dd, J =
11.2, 5.1 Hz, 1H, H-6b), 3.52 (dd, J = 10.0, 2.9
Hz, 1H, H-3), 3.41 (dd, J = 10.3, 1.9 Hz, 1H, H-2). 13C NMR (151 MHz, MeOD): δ 101.43 (C′-1), 91.39
(C-1), 78.37 (C-5), 76.70 (C-4), 73.43 (C-3), 71.62 (C′-5),
71.02 (C-2), 69.83 (C′-4), 69.66 (C′-2), 69.20 (C′-3),
61.30 (C-6), 59.70 (C′-6).
Compound 2b
Methyl 3,5-bis(2-(boc-amino)ethoxy)benzoate
(110 mg, 0.25 mmol, 1 equiv) was prepared as reported[30] and dissolved in 1:1 TFA/DCM and stirred at r.t. for 2
h before concentrating in vacuo. The residue was
dissolved in DCM (10 mL), and TEA (139 μL, 1 mmol, 4 equiv)
was added, and the mixture was left stirring for 5 min at r.t. before
cooling to 0 °C. Propargyl chloroformate (55 μL, 0.55 mmol,
2.2 equiv) was added dropwise, and the reaction was allowed to slowly
warm up to r.t. and was left stirring for 16 h. The reaction was diluted
with an excess of DCM and 1 M aq HCl, and the organic layer was collected,
dried with NaSO4, filtrated, and concentrated in
vacuo. The compound was purified by column chromatography
using a gradient of 0–50% EtOAc in petroleum ether and with
1% TFA yielding the free acid (89 mg, 0.22 mmol, 88%). 1H NMR (600 MHz, methanol-d4): δ
7.20 (d, J = 2.4 Hz, 2H, 2× CHarom-2,6), 6.79
(d, J = 2.5 Hz, 1× CHarom-4), 4.68 (d, J = 2.4 Hz, 4H, 2× CH, propargyl), 4.07 (t, J = 5.5 Hz,
4H, 2× OCH), 3.41
(t, J = 5.5 Hz, 4H, 2× NCH), 2.89 (t, J = 2.5 Hz,
2H, 2× C≡CH). 13C NMR (151
MHz, Methanol-d4): δ 169.61 (C=O, acid), 161.30 (CO, aromatic),
158.13 (2× C=O, carbamate), 134.17 (Carom-COOH), 109.32 (2× CHarom-2,6), 107.26 (CHarom-4),
79.44 (2× C≡CH), 75.80 (2× C≡CH), 68.11 (2× OCH2), 53.20
(2× CH2, propargyl), 41.43 (2× NCH2). HR-ESI-TOF/MS (m/z): [M + Na]+ calcd for C19H20N2O8, 427.1117; found, 427.1116.
Compound 2d
To a solution of 2a (16.4 mg, 82
μmol) in DCM (1 mL) was added (COCl)2 (31 μL,
246 μL, 3 equiv) and DMF (10 μL). After
stirring at r.t. for 1.5 h, the mixture was concentrated. The resulting
residue was coevaporated with 10 mL of anhydrous toluene and then
redissolved in DCM (1 mL) and cooled to 0 °C. A solution of pyridine
(1 mL), DCM (1 mg), and dodecane-1,12-diamine (10 mg) was added slowly
to the reaction flask. The resulting mixture was stirred at r.t. overnight.
Solvents were removed, and the residue was partitioned between EtOAc
and water. The organic layer was separated, washed with brine (1×),
dried with anhydrous MgSO4, filtered, and concentrated.
The residue was purified by silica gel flash chromatography and yielded
a product (20 mg, 80%). 1H NMR (600 MHz, acetone-d): δ 7.57 (t, J = 5.9 Hz, 2H, NH), 7.02 (s, 4H, 4× CH arom), 6.64
(s, 2H, 2× CH arom), 4.71–4.67 (m, 8H, (4× OCH2), 3.24 (q, J = 6.7 Hz, 4H,
4× CH propargyl), 2.97 (s, 4H, 2× NHCH), 1.92 (s, 4H, 2× CH), 1.46 (t, J = 7.1
Hz, 4H, 2× CH),
1.28–1.02 (m, 12H, 6× CH). 13C NMR (151 MHz, acetone-d): δ 165.64 (2× C=O), 158.77 (4× CO, arom), 137.57 (2× C-CONH), 106.68 (4× CH), 104.54 (2× CH), 78.54
(4× CCH, alkyne), 76.38 (4× CCH, alkyne), 55.70 (4× OCH2), 39.64
(2× N-CH2), 29.32 (CH2), 29.30 (CH2), 29.17 (CH2), 29.15 (CH2),
29.04 (CH2), 29.01 (CH2), 28.90 (CH2), 28.77(CH2), 28.64 (CH2).
HR-ESI-TOF/MS (m/z): [M + H]+ calcd for C38H44N2O6, 625.3277; found, 625.3302.
hPG-azide (2.5 mg, 0.002 mmol
of azide groups) was dissolved in water followed by the addition of
ligand 7 (1.8 mg, 0.0032 mmol, 1.6 equiv). Copper sulfate
pentahydrate (0.1 equiv) was dissolved in water separately and added
to the reaction mixture. 0.3 equiv of sodium ascorbate was also dissolved
in water separately and added to the reaction mixture. The reaction
was carried out at 100 °C in the microwave for 1 h. Cuprisorb
resin was added to the reaction mixture and stirred to adsorb excess
copper. The solvent was evaporated, and the crude reaction mixture
was purified by dialysis using a cellulose based dialysis cassette
(MWCO: 2k) against deionized water for 3–4 days and freeze
dried to get 8 in 80% yield as an off-white solid. The
disappearance of the azide stretching peak in the IR spectra of the
final compound confirmed that all of the azido polymer were consumed. 1H NMR (600 MHz, deuterium oxide): δ 8.03 (s, triazole),
5.18–3.16 (m, CH2 and CH, hPG-OH backbone; GB3), 2.31–2.18 (m, GB3; CH3), 0.85
(s, hPG core, CH2).
Compound 9
hPG-propargyl (5 mg, 0.0095
mmol of propargyl groups) was dissolved in water followed by the addition
of 1d (8.2 mg, 0.012 mmol, 1.3 equiv) which was dissolved
in DMF. Copper sulfate pentahydrate (0.1 equiv) was dissolved in water
separately and added to the reaction mixture. 0.3 equiv of sodium
ascorbate was also dissolved in water separately and added to the
reaction mixture. The reaction was carried out at 80 °C in the
microwave for 60 min. Cuprisorb resin was added to the reaction mixture
and stirred to adsorb excess copper. The crude mixture was extracted
using ethyl acetate and water. The protected polymer conjugate was
then subjected to deacetylation using the standard procedure described
above. The solvent was evaporated, and the crude reaction mixture
was purified by dialysis using a cellulose-based dialysis cassette
(MWCO: 2k) against deionized water for 3–4 days and freeze-dried.
The final product 9 was obtained in 75% yield as a white
solid. The disappearance of the C≡CH stretching peak in the
IR spectra of the final compound confirmed that all the polymer was
consumed. 1H NMR (600 MHz, deuterium oxide): δ 8.30
(s, triazole), 5.69 (d, J = 9.2 Hz, galabiose; H-1),
5.00 (d, J = 3.9 Hz, galabiose; H′-1), 4.51–3.30
(m, CH2 and CH, hPG-OH backbone; galabiose; H-2, H-3, H-4,
H-5, H-6, H′-2, H′-3, H′-4, H′-5, H′-6),
1.25 (s, CH2 core), 0.84 (s, CH3 core).
Authors: Howard Trachtman; Avital Cnaan; Erica Christen; Kathleen Gibbs; Sanyi Zhao; David W K Acheson; Robert Weiss; Frederick J Kaskel; Adrian Spitzer; Gladys H Hirschman Journal: JAMA Date: 2003-09-10 Impact factor: 56.272
Authors: Wenjing Lu; Wenjuan Du; Victor J Somovilla; Guangyun Yu; Diksha Haksar; Erik de Vries; Geert-Jan Boons; Robert P de Vries; Cornelis A M de Haan; Roland J Pieters Journal: J Med Chem Date: 2019-06-28 Impact factor: 7.446