| Literature DB >> 33876465 |
Emilio Nuñez-Borque1, Sergio Fernandez-Bravo1, Pablo Rodriguez Del Rio2,3, Ebrahim Mohammed Alwashali4, David Lopez-Dominguez5, Maria Dolores Gutierrez-Blazquez4, Jose Julio Laguna3,6, Jaime Tome-Amat3,7, Julio Gallego-Delgado8,9, Alicia Gomez-Lopez10, Diana Betancor10, Javier Cuesta-Herranz1,3,10, Maria Dolores Ibañez-Sandin2,3, Alberto Benito-Martin11, Vanesa Esteban1,3,12.
Abstract
BACKGROUND: Anaphylaxis is the most severe manifestation of allergic disorders. The poor knowledge of its molecular mechanisms often leads to under-diagnosis. MicroRNAs (miRNA) regulate physiologic and pathologic processes, and they have been postulated as promising diagnostic markers. The main objectives of this study were to characterize the human miRNA profile during anaphylaxis and to assess their capacity as diagnostic markers and determine their participation in the molecular mechanisms of this event.Entities:
Keywords: anaphylaxis; biomarker; endothelial cells; microRNA; next-generation sequencing; systems biology analysis
Mesh:
Substances:
Year: 2021 PMID: 33876465 PMCID: PMC8453890 DOI: 10.1111/pai.13518
Source DB: PubMed Journal: Pediatr Allergy Immunol ISSN: 0905-6157 Impact factor: 6.377
Clinical characteristics of anaphylactic patients included in this study
| Patients | Symptoms | Signs | Severity | Tryptase | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Number | Age | Gender | Trigger | Skin | Mucous | Digestive | Respiratory | Nervous | Vascular | Hr | SatO2 | Grade | Acute | Basal |
| 1 | 17 | F | Milk | E; Pr | N; Ap | 69 | ‐ | 2 | 6.93 | 5.91 | ||||
| 2 | 11 | F | Egg | N; Ap; V; Dr | R | ‐ | ‐ | 2 | 5.83 | 3.34 | ||||
| 3 | 4 | M | Cashew | E | Ag | R | T | 136 | 98% | 2 | <1 | <1 | ||
| 4 | 5 | F | Roosterfish | E; Pr; U | W | 83 | 98% | 2 | 9.36 | 11.4 | ||||
| 5 | 9 | F | Milk | N; Ap; V; Dr | R | 83 | 99% | 2 | 5.5 | <1 | ||||
| 6 | 9 | M | Egg | E; Pr | N; Ap; V; Dr | R | T | 135 | 98% | 2 | 5.21 | 3.01 | ||
| 7 | 14 | F | Egg | E; Pr | Ag | N; Ap | R | Dz | Hy | 56 | 99% | 3 | 2.6 | 2.29 |
| 8 | 11 | F | Milk | U | Ag | R; W | 89 | 97% | 2 | 3.81 | 3.31 | |||
| 9 | 15 | M | Cheese | E | R; W | 57 | 96% | 2 | 8.03 | 5.69 | ||||
| 10 | 13 | F | Milk | Ap | R; W | 77 | 98% | 2 | 5.04 | 2.98 | ||||
| 11 | 5 | M | Milk | E | Ap; V | Dy | Hy | 85 | 94% | 3 | 7.83 | 4.97 | ||
| 12 | 14 | M | Egg | E | Ag | N; Ap; V; Dr | R | 81 | 98% | 2 | 2.88 | 2.44 | ||
| 13 | 10 | F | Egg | E; Pr | Ag | W | 117 | ‐ | 2 | 3.89 | 3.78 | |||
| 14 | 14 | F | Nut | U | Ag | Cg | Dz | 96 | 99% | 2 | 6.63 | 5.65 | ||
| 15 | 7 | M | Roosterfish | Ag | Cg | 85 | 98% | 2 | 3.84 | 2.53 | ||||
| 16 | 14 | F | Milk | U | N; Ap | R; W | 107 | 97% | 2 | 8.74 | 1.72 | |||
| 17 | 11 | F | Milk | E | Ag | N; Ap | R; Cg | 100 | 99% | 2 | 8.57 | 7.05 | ||
| 18 | 15 | M | Peanut | Ap; V | Dy | 93 | 99% | 2 | 3.03 | 1.73 | ||||
| 19 | 17 | M | Hazelnut | Ag | Dy | 90 | 100% | 2 | 5.62 | 7.04 | ||||
Gender: M (male), F (female). Clinical symptoms—skin: E (erythema), U (urticaria), and Pr (pruritus); mucous: Ag (angioedema); digestive: N (nausea), V (vomit), Dr (diarrhea), and Ap (abdominal pain); respiratory: Dy (dyspnea), W (wheezing), R (rhinitis), and Cg (cough); vascular: Hy (hypotension) and T (tachycardia); and neurologic: Dz (dizziness). Clinical signs—Hr (heart rate) and SatO2 (oxygen saturation). Tryptase values correspond to ng/mL.
Patients used for the NGS.
FIGURE 1NGS‐miRNAs profiling in anaphylaxis. A, The PCA exhibits similarity between samples belonging to the biologic replicas and a separation among acute (A) and basal conditions (B). B, Volcano plot shows the dispersion of total miRNAs identified by NGS with the statistically significant difference (P < .05) indicated in blue. C, The heatmap represents graphically the sampling and the statistically significant miRNAs identified by NGS. Units represent transformed (log2) and normalized (cyclic Loess method) abundance data obtained by NGS. D, The graphic shows the distribution by fold change (FC) of the 21 increased and the 20 decreased miRNAs. Red indicates an increase in miRNAs in the acute phase, and blue indicates a decrease in miRNAs in the acute phase
FIGURE 2qPCR analysis of serum miR‐21‐3p and miR‐487b‐3p levels from 38 anaphylactic samples of 19 patients. Serum miR‐21‐3p (*P: .0251) (A) and miR‐487b‐3p (* P: .0155) (B) are increased in the acute phase of anaphylaxis compared with basal. Patients included in the NGS are indicated in blue. C, miR‐21‐3p and miR‐487‐3p determination by NGS. FC: fold change
miR‐21‐3p SBA
| Top diseases and functions | Score |
|---|---|
| Cancer, inflammatory response, organismal injury and abnormalities | 43 |
| Nervous system development and function, organ morphology, organismal development | 31 |
| Cell death and survival, organismal injury and abnormalities, renal necrosis/cell death | 29 |
Top diseases and functions and the most statistically significant canonical pathways from the Ingenuity Pathway Analysis for the miR‐21‐3p target genes. Activation of z‐score biologic function has significantly more “increased” predictions than “decreased” predictions (z > 0) or vice versa (z < 0). P‐value is calculated using the right‐tailed Fisher exact test.
miR‐487b‐3p SBA
| Top diseases and functions | Score |
|---|---|
| Cancer, dermatological diseases and conditions, organismal injury and abnormalities | 31 |
| Cellular assembly and organization, developmental disorder, DNA replication, recombination, and repair | 20 |
| Nervous system development and function, organ morphology, tissue morphology | 17 |
Top diseases and function and the most statistically significant canonical pathways from the Ingenuity Pathway Analysis for the miR‐487b‐3p target genes. Activation of z‐score biologic function has significantly more “increased” predictions than “decreased” predictions (z > 0) or vice versa (z < 0). P‐value is calculated using the right‐tailed Fisher exact test.
FIGURE 3miR‐21‐3p and miR‐487b‐3p determinations in an in vitro anaphylactic serum‐EC system. HMVEC‐D were incubated with sera from 5 paired anaphylactic samples (acute and basal phases), a cocktail of mediators (histamine 1 µM, PAF 10 µM, and thrombin 0.5 µM), and EGM‐2 medium (negative control) for 2 h. (A) miR‐21‐3p and (B) miR‐487b‐3p levels were intracellularly measured after incubation with stimuli. The cocktail of anaphylactic mediators and acute sera increased miR‐21‐3p values vs untreated HMVEC‐D (negative control) (*P: .0436 and *P: .02, respectively) and between the acute phase vs baseline (#P: .0393). (C) miR‐21‐3p and (D) miR‐487b‐3p serum abundance was determined after EC contact. miR‐21‐3p serum levels increased in acute phase after a 2‐h incubation with HMVEC‐D vs start value (*P: .0241). Graphics represent the mean ± SEM. Control: medium. Mediators: histamine, PAF, and thrombin. Acute: serum from acute phase of anaphylaxis. Basal: serum from basal phase of anaphylaxis. 0: start. 2 h: 2 hours (end‐point)