Literature DB >> 33871905

svReg: Structural varying-coefficient regression to differentiate how regional brain atrophy affects motor impairment for Huntington disease severity groups.

Rakheon Kim1, Samuel Müller2,3, Tanya P Garcia4.   

Abstract

For Huntington disease, identification of brain regions related to motor impairment can be useful for developing interventions to alleviate the motor symptom, the major symptom of the disease. However, the effects from the brain regions to motor impairment may vary for different groups of patients. Hence, our interest is not only to identify the brain regions but also to understand how their effects on motor impairment differ by patient groups. This can be cast as a model selection problem for a varying-coefficient regression. However, this is challenging when there is a pre-specified group structure among variables. We propose a novel variable selection method for a varying-coefficient regression with such structured variables and provide a publicly available R package svreg for implementation of our method. Our method is empirically shown to select relevant variables consistently. Also, our method screens irrelevant variables better than existing methods. Hence, our method leads to a model with higher sensitivity, lower false discovery rate and higher prediction accuracy than the existing methods. Finally, we found that the effects from the brain regions to motor impairment differ by disease severity of the patients. To the best of our knowledge, our study is the first to identify such interaction effects between the disease severity and brain regions, which indicates the need for customized intervention by disease severity.
© 2021 Wiley-VCH GmbH.

Entities:  

Keywords:  Huntington disease; interaction model; pliable Lasso; structural varying-coefficient regression; variable selection

Mesh:

Year:  2021        PMID: 33871905      PMCID: PMC9012319          DOI: 10.1002/bimj.202000312

Source DB:  PubMed          Journal:  Biom J        ISSN: 0323-3847            Impact factor:   1.715


  16 in total

1.  Network Lasso: Clustering and Optimization in Large Graphs.

Authors:  David Hallac; Jure Leskovec; Stephen Boyd
Journal:  KDD       Date:  2015-08

2.  Variable Selection in Nonparametric Varying-Coefficient Models for Analysis of Repeated Measurements.

Authors:  Lifeng Wang; Hongzhe Li; Jianhua Z Huang
Journal:  J Am Stat Assoc       Date:  2008-12-01       Impact factor: 5.033

3.  Motor abnormalities in premanifest persons with Huntington's disease: the PREDICT-HD study.

Authors:  Kevin M Biglan; Christopher A Ross; Douglas R Langbehn; Elizabeth H Aylward; Julie C Stout; Sarah Queller; Noelle E Carlozzi; Kevin Duff; Leigh J Beglinger; Jane S Paulsen
Journal:  Mov Disord       Date:  2009-09-15       Impact factor: 10.338

4.  Prediction of manifest Huntington's disease with clinical and imaging measures: a prospective observational study.

Authors:  Jane S Paulsen; Jeffrey D Long; Christopher A Ross; Deborah L Harrington; Cheryl J Erwin; Janet K Williams; Holly James Westervelt; Hans J Johnson; Elizabeth H Aylward; Ying Zhang; H Jeremy Bockholt; Roger A Barker
Journal:  Lancet Neurol       Date:  2014-11-03       Impact factor: 44.182

5.  Regional atrophy associated with cognitive and motor function in prodromal Huntington disease.

Authors:  Elizabeth H Aylward; Deborah L Harrington; James A Mills; Peggy C Nopoulos; Christopher A Ross; Jeffrey D Long; Dawei Liu; Holly K Westervelt; Jane S Paulsen
Journal:  J Huntingtons Dis       Date:  2013

6.  COX REGRESSION WITH EXCLUSION FREQUENCY-BASED WEIGHTS TO IDENTIFY NEUROIMAGING MARKERS RELEVANT TO HUNTINGTON'S DISEASE ONSET.

Authors:  Tanya P Garcia; Samuel Müller
Journal:  Ann Appl Stat       Date:  2017-01-05       Impact factor: 2.083

7.  Unified Huntington's Disease Rating Scale: reliability and consistency. Huntington Study Group.

Authors: 
Journal:  Mov Disord       Date:  1996-03       Impact factor: 10.338

8.  Diagnostic criteria for Huntington's disease based on natural history.

Authors:  Ralf Reilmann; Blair R Leavitt; Christopher A Ross
Journal:  Mov Disord       Date:  2014-08-27       Impact factor: 10.338

9.  VARIABLE SELECTION AND ESTIMATION IN HIGH-DIMENSIONAL VARYING-COEFFICIENT MODELS.

Authors:  Fengrong Wei; Jian Huang; Hongzhe Li
Journal:  Stat Sin       Date:  2011-10-01       Impact factor: 1.261

10.  Clinical and Biomarker Changes in Premanifest Huntington Disease Show Trial Feasibility: A Decade of the PREDICT-HD Study.

Authors:  Jane S Paulsen; Jeffrey D Long; Hans J Johnson; Elizabeth H Aylward; Christopher A Ross; Janet K Williams; Martha A Nance; Cheryl J Erwin; Holly J Westervelt; Deborah L Harrington; H Jeremy Bockholt; Ying Zhang; Elizabeth A McCusker; Edmond M Chiu; Peter K Panegyres
Journal:  Front Aging Neurosci       Date:  2014-04-22       Impact factor: 5.750

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