| Literature DB >> 33870190 |
Alexandre Boutet1,2, Jurgen Germann2, Dave Gwun2, Aaron Loh2, Gavin J B Elias2, Clemens Neudorfer2, Michelle Paff2, Andreas Horn3, Andrea A Kuhn3,4,5,6, Renato P Munhoz7, Suneil K Kalia2,8,9, Mojgan Hodaie2,8, Walter Kucharczyk1,2, Alfonso Fasano7,10,9, Andres M Lozano2,8.
Abstract
Deep brain stimulation of the subthalamic nucleus has become a standard therapy for Parkinson's disease. Despite extensive experience, however, the precise target of optimal stimulation and the relationship between site of stimulation and alleviation of individual signs remains unclear. We examined whether machine learning could predict the benefits in specific Parkinsonian signs when informed by precise locations of stimulation. We studied 275 Parkinson's disease patients who underwent subthalamic nucleus deep brain stimulation between 2003 and 2018. We selected pre-deep brain stimulation and best available post-deep brain stimulation scores from motor items of the Unified Parkinson's Disease Rating Scale (UPDRS-III) to discern sign-specific changes attributable to deep brain stimulation. Volumes of tissue activated were computed and weighted by (i) tremor, (ii) rigidity, (iii) bradykinesia and (iv) axial signs changes. Then, sign-specific sites of optimal ('hot spots') and suboptimal efficacy ('cold spots') were defined. These areas were subsequently validated using machine learning prediction of sign-specific outcomes with in-sample and out-of-sample data (n = 51 subthalamic nucleus deep brain stimulation patients from another institution). Tremor and rigidity hot spots were largely located outside and dorsolateral to the subthalamic nucleus whereas hot spots for bradykinesia and axial signs had larger overlap with the subthalamic nucleus. Using volume of tissue activated overlap with sign-specific hot and cold spots, support vector machine classified patients into quartiles of efficacy with ≥92% accuracy. The accuracy remained high (68-98%) when only considering volume of tissue activated overlap with hot spots but was markedly lower (41-72%) when only using cold spots. The model also performed poorly (44-48%) when using only stimulation voltage, irrespective of stimulation location. Out-of-sample validation accuracy was ≥96% when using volume of tissue activated overlap with the sign-specific hot and cold spots. In two independent datasets, distinct brain areas could predict sign-specific clinical changes in Parkinson's disease patients with subthalamic nucleus deep brain stimulation. With future prospective validation, these findings could individualize stimulation delivery to optimize quality of life improvement.Entities:
Keywords: Parkinson’s disease; deep brain stimulation; machine learning; neuroimaging; subthalamic nucleus
Year: 2021 PMID: 33870190 PMCID: PMC8042250 DOI: 10.1093/braincomms/fcab027
Source DB: PubMed Journal: Brain Commun ISSN: 2632-1297
Patient demographics of TWH (n = 275) and CUB (n = 51)
| Patient cohort | TWH | CUB |
|
|---|---|---|---|
| No. of patients (female) | 275 (82) | 51 (17) | >0.05 |
| Age (year) | 59.8 ± 7.1 | 60.0 ± 7.9 | >0.05 |
| Disease duration (year) | 11.4 ± 4.3 | 10.4 ± 3.9 | >0.05 |
| Preoperative LED (mg) | 1405.1 ± 698.2 | 1071.7 ± 528.5 |
|
Baseline demographics between the two institutions (TWH and CUB) were not significantly different (P > 0.05, two-sample T-test), except for levodopa equivalent dose (P < 0.01). Bold indicates statistical significance. Data are numbers of participants or mean ± standard deviation.
CUB = Charité-Universitätsmedizin Berlin; LED = levodopa equivalent dose; TWH = Toronto Western Hospital.
Figure 1Patient flowchart. Two patient cohorts were included in this study (n = 326): TWH (n = 275) and CUB (n = 51). Because no clinical change attributable to DBS could be calculated, patients with both baseline and best postoperative scores of 0 for a specific sign were not included in the sign-specific analysis. Therefore, the number of patients included in each sign-specific analysis for TWH was: (i) tremor (n = 242), (ii) rigidity (n = 273), (iii) bradykinesia (n = 275) and (iv) axial signs (n = 274). Similarly, the number of patients included in each sign-specific analysis for CUB was: (i) tremor (n = 40), (ii) rigidity (n = 48), (iii) bradykinesia (n = 51) and (iv) axial signs (n = 50). CUB = Charité-Universitätsmedizin Berlin; TWH = Toronto Western Hospital.
Sign-specific clinical outcomes
| Sign | Preoperative UPDRS-III score | Adjusted clinical change | Time after surgery (year) |
|---|---|---|---|
| TWH | |||
| Tremor ( | 6.0 ± 4.3 | 5.0 ± 4.2 (82.2) | 2.2 ± 2.0 |
| Rigidity ( | 6.8 ± 3.8 | 4.3 ± 3.7 (60.0) | 1.9 ± 1.7 |
|
Bradykinesia ( | 16.4 ± 5.3 | 7.4 ± 6.2 (45.1) | 1.5 ± 1.5 |
|
Axial signs ( | 5.7 ± 2.6 | 3.2 ± 2.8 (53.8) | 1.6 ± 1.5 |
| CUB | |||
|
Tremor ( | 6.5 ± 5.5 | 4.3 ± 3.7 (72.2) | N/A* |
|
Rigidity ( | 7.6 ± 4.0 | 4.4 ± 2.8 (57.9) | N/A* |
|
Bradykinesia ( | 18.1 ± 7.2 | 7.2 ± 5.8 (39.8) | N/A* |
|
Axial signs ( | 5.8 ± 3.1 | 2.7 ± 2.2 (46.6) | N/A* |
Clinical change reflects the adjusted difference between the sign-specific UPDRS-III at the time of follow-up and prior to surgery. The clinical improvement attributable to DBS was adjusted for disease severity using the corresponding preoperative baseline (Med-ON) and postoperative UPDRS-III scores (Med-ON/DBS-ON) (see Supplementary material and Supplementary Table 2). Time after surgery represents the timepoint with best clinical score. For the CUB cohort, * indicates that the precise time after surgery was not available but it was usually 1–2 years after surgery. Unless otherwise stated the data are mean ± standard deviation and percentages in parentheses.
CUB = Charité-Universitätsmedizin Berlin; LED = levodopa equivalent dose; N/A = not available; TWH = Toronto Western Hospital; UPDRS-III: Motor section of the Unified Parkinson’s disease rating scale.
Figure 2Sign-specific area of clinical change after STN-DBS. Binarized areas of optimal (‘hot spots’) and suboptimal (‘cold spots’) efficacy were identified using mass univariate analysis (uncorrected P < 0.01). Hot (positive t-values, green) and cold (negative t-values, red) spots are shown. The subthalamic nucleus (green outline), zona incerta (yellow outline), and thalamic ventral-intermediate nucleus (black outline) are projected on sagittal (first column) and coronal (second column) T1-weighted MRI (MNI ICBM 2009 b NLIN asymmetric). The nuclei outline were derived from nuclei labels using FSLeyes for visualization.
Figure 3Machine learning model classification accuracy using TWH (Internal Validation). Sign-specific accuracy matrices (4 × 4) classifying patients into quartiles of clinical changes (Q) obtained with SVM model (machine learning model). To ascertain the robustness of our model, we tested its accuracy with different inputs (VTA overlap with hot spots only and/or cold spots only). Voltage, a surrogate of VTA size, was also used as an input. The diagonal (top left—bottom right) represents patients correctly classified. Matrix columns and rows represent true and predicted data, respectively. TWH = Toronto Western Hospital; VTA = volume of tissue activated.
Figure 4Machine learning model classification accuracy using CUB (External Validation). (A) CUB distribution of the active contacts (red dots) and the subthalamic nucleus (shaded green) are shown on sagittal (first and third column) and coronal (middle column) T1-weighted MRI (MNI ICBM 2009 b NLIN asymmetric). (B) Sign-specific accuracy matrices (4 × 4) classifying patients into quartiles of clinical changes (Q) obtained with SVM model (machine learning model). To ascertain the robustness of our model, we tested its accuracy with different inputs (VTA overlap with hot spots only and/or cold spots only). Voltage, a surrogate of VTA size, was also used as an input. The diagonal (top left—bottom right) represents patients correctly classified. Matrix columns and rows represent true and predicted data, respectively. CUB = Charité-Universitätsmedizin Berlin; VTA = volume of tissue activated.
Figure 5Sign-specific hot spots structural connectivity. Sign-specific hot spots were iteratively seeded (50 000 streamlines) into high-quality normative diffusion-weighted imaging to investigate patterns of connectivity to motor regions including primary motor cortex (M1), premotor cortex (PM), cerebellum, supplementary motor area and thalamus. Contra = contralateral; Ipsi = ipsilateral.