Literature DB >> 33866817

Small RNAs and chromatin in the multigenerational epigenetic landscape of Caenorhabditis elegans.

Natalya Frolows1,2, Alyson Ashe1.   

Abstract

For decades, it was thought that the only heritable information transmitted from one individual to another was that encoded in the DNA sequence. However, it has become increasingly clear that this is not the case and that the transmission of molecules from within the cytoplasm of the gamete also plays a significant role in heritability. The roundworm, Caenorhabditis elegans, has emerged as one of the leading model organisms in which to study the mechanisms of transgenerational epigenetic inheritance (TEI). Collaborative efforts over the past few years have revealed that RNA molecules play a critical role in transmitting transgenerational responses, but precisely how they do so is as yet uncertain. In addition, the role of histone modifications in epigenetic inheritance is increasingly apparent, and RNA and histones interact in a way that we do not yet fully understand. Furthermore, both exogenous and endogenous RNA molecules, as well as other environmental triggers, are able to induce heritable epigenetic changes that affect transcription across the genome. In most cases, these epigenetic changes last only for a handful of generations, but occasionally can be maintained much longer: perhaps indefinitely. In this review, we discuss the current understanding of the role of RNA and histones in TEI, as well as making clear the gaps in our knowledge. We also speculate on the evolutionary implications of epigenetic inheritance, particularly in the context of a short-lived, clonally propagating species. This article is part of the theme issue 'How does epigenetics influence the course of evolution?'

Entities:  

Keywords:  22G RNA; RNAe; epigenetics; piRNA; small RNAs; transgenerational epigenetic inheritance

Mesh:

Substances:

Year:  2021        PMID: 33866817      PMCID: PMC8059974          DOI: 10.1098/rstb.2020.0112

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.671


  131 in total

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2.  Transgenerational Effects of Extended Dauer Diapause on Starvation Survival and Gene Expression Plasticity in Caenorhabditis elegans.

Authors:  Amy K Webster; James M Jordan; Jonathan D Hibshman; Rojin Chitrakar; L Ryan Baugh
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3.  Step-wise methylation of histone H3K9 positions heterochromatin at the nuclear periphery.

Authors:  Benjamin D Towbin; Cristina González-Aguilera; Ragna Sack; Dimos Gaidatzis; Véronique Kalck; Peter Meister; Peter Askjaer; Susan M Gasser
Journal:  Cell       Date:  2012-08-31       Impact factor: 41.582

4.  The within-host dynamics of infection in trans-generationally primed flour beetles.

Authors:  Ann T Tate; Peter Andolfatto; Jeffery P Demuth; Andrea L Graham
Journal:  Mol Ecol       Date:  2017-04-04       Impact factor: 6.185

5.  piRNAs initiate an epigenetic memory of nonself RNA in the C. elegans germline.

Authors:  Masaki Shirayama; Meetu Seth; Heng-Chi Lee; Weifeng Gu; Takao Ishidate; Darryl Conte; Craig C Mello
Journal:  Cell       Date:  2012-06-25       Impact factor: 41.582

6.  Transgenerational inheritance of an acquired small RNA-based antiviral response in C. elegans.

Authors:  Oded Rechavi; Gregory Minevich; Oliver Hobert
Journal:  Cell       Date:  2011-11-23       Impact factor: 41.582

7.  Natural RNA interference directs a heritable response to the environment.

Authors:  Daniel Schott; Itai Yanai; Craig P Hunter
Journal:  Sci Rep       Date:  2014-12-09       Impact factor: 4.379

8.  Environmental stresses induce transgenerationally inheritable survival advantages via germline-to-soma communication in Caenorhabditis elegans.

Authors:  Saya Kishimoto; Masaharu Uno; Emiko Okabe; Masanori Nono; Eisuke Nishida
Journal:  Nat Commun       Date:  2017-01-09       Impact factor: 14.919

9.  Grandparental immune priming in the pipefish Syngnathus typhle.

Authors:  Anne Beemelmanns; Olivia Roth
Journal:  BMC Evol Biol       Date:  2017-02-07       Impact factor: 3.260

10.  Cysteine synthases CYSL-1 and CYSL-2 mediate C. elegans heritable adaptation to P. vranovensis infection.

Authors:  Nicholas O Burton; Cristian Riccio; Alexandra Dallaire; Jonathan Price; Benjamin Jenkins; Albert Koulman; Eric A Miska
Journal:  Nat Commun       Date:  2020-04-08       Impact factor: 14.919

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  7 in total

1.  Heritable epigenetic changes at single genes: challenges and opportunities in Caenorhabditis elegans.

Authors:  Mary Chey; Antony M Jose
Journal:  Trends Genet       Date:  2021-09-04       Impact factor: 11.821

2.  How does epigenetics influence the course of evolution?

Authors:  Alyson Ashe; Vincent Colot; Benjamin P Oldroyd
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-04-19       Impact factor: 6.671

3.  Epigenetic inheritance and evolution: a historian's perspective.

Authors:  Laurent Loison
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-04-19       Impact factor: 6.671

Review 4.  Empirical evidence for epigenetic inheritance driving evolutionary adaptation.

Authors:  Dragan Stajic; Lars E T Jansen
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-04-19       Impact factor: 6.671

5.  Origin of Cancer: Cell work is the Key to Understanding Cancer Initiation and Progression.

Authors:  Rainer G Hanselmann; Cornelius Welter
Journal:  Front Cell Dev Biol       Date:  2022-03-01

6.  Transgenerational effects of alcohol on behavioral sensitivity to alcohol in Caenorhabditis elegans.

Authors:  Dawn M Guzman; Keerthana Chakka; Ted Shi; Alyssa Marron; Ansley E Fiorito; Nima S Rahman; Stephanie Ro; Dylan G Sucich; Jonathan T Pierce
Journal:  PLoS One       Date:  2022-10-18       Impact factor: 3.752

Review 7.  Nematode chromosomes.

Authors:  Peter M Carlton; Richard E Davis; Shawn Ahmed
Journal:  Genetics       Date:  2022-05-05       Impact factor: 4.402

  7 in total

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