Literature DB >> 20223759

Perinuclear P granules are the principal sites of mRNA export in adult C. elegans germ cells.

Ujwal Sheth1, Jason Pitt, Shannon Dennis, James R Priess.   

Abstract

Germline-specific granules of unknown function are found in a wide variety of organisms, including C. elegans, where they are called P granules. P granules are cytoplasmic bodies in oocytes and early embryos. Throughout most of the C. elegans life cycle, however, P granules are associated with clusters of nuclear pore complexes (NPCs) on germ cell nuclei. We show that perinuclear P granules differ from cytoplasmic P granules in many respects, including structure, stability and response to metabolic changes. Our results suggest that nuclear-associated P granules provide a perinuclear compartment where newly exported mRNAs are collected prior to their release to the general cytoplasm. First, we show that mRNA export factors are highly enriched at the NPCs associated with P granules. Second, we discovered that the expression of high-copy transgenes could be induced in a subset of germ cells, and used this system to demonstrate that nascent mRNA traffics directly to P granules. P granules appear to sequester large amounts of mRNA in quiescent germ cells, presumably preventing translation of that mRNA. However, we did not find evidence that P granules normally sequester aberrant mRNAs, or mRNAs targeted for destruction by the RNAi pathway.

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Year:  2010        PMID: 20223759      PMCID: PMC2847466          DOI: 10.1242/dev.044255

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  56 in total

1.  Kinetic analysis of translocation through nuclear pore complexes.

Authors:  K Ribbeck; D Görlich
Journal:  EMBO J       Date:  2001-03-15       Impact factor: 11.598

2.  P granules in the germ cells of Caenorhabditis elegans adults are associated with clusters of nuclear pores and contain RNA.

Authors:  J N Pitt; J A Schisa; J R Priess
Journal:  Dev Biol       Date:  2000-03-15       Impact factor: 3.582

3.  Creation of low-copy integrated transgenic lines in Caenorhabditis elegans.

Authors:  V Praitis; E Casey; D Collar; J Austin
Journal:  Genetics       Date:  2001-03       Impact factor: 4.562

4.  Systematic functional analysis of the Caenorhabditis elegans genome using RNAi.

Authors:  Ravi S Kamath; Andrew G Fraser; Yan Dong; Gino Poulin; Richard Durbin; Monica Gotta; Alexander Kanapin; Nathalie Le Bot; Sergio Moreno; Marc Sohrmann; David P Welchman; Peder Zipperlen; Julie Ahringer
Journal:  Nature       Date:  2003-01-16       Impact factor: 49.962

5.  Analysis of RNA associated with P granules in germ cells of C. elegans adults.

Authors:  J A Schisa; J N Pitt; J R Priess
Journal:  Development       Date:  2001-04       Impact factor: 6.868

6.  Germline and developmental roles of the nuclear transport factor importin alpha3 in C. elegans.

Authors:  K G Geles; S A Adam
Journal:  Development       Date:  2001-05       Impact factor: 6.868

7.  X-chromosome silencing in the germline of C. elegans.

Authors:  William G Kelly; Christine E Schaner; Abby F Dernburg; Min-Ho Lee; Stuart K Kim; Anne M Villeneuve; Valerie Reinke
Journal:  Development       Date:  2002-01       Impact factor: 6.868

8.  An isoform of eIF4E is a component of germ granules and is required for spermatogenesis in C. elegans.

Authors:  A Amiri; B D Keiper; I Kawasaki; Y Fan; Y Kohara; R E Rhoads; S Strome
Journal:  Development       Date:  2001-10       Impact factor: 6.868

9.  The yeast nuclear pore complex: composition, architecture, and transport mechanism.

Authors:  M P Rout; J D Aitchison; A Suprapto; K Hjertaas; Y Zhao; B T Chait
Journal:  J Cell Biol       Date:  2000-02-21       Impact factor: 10.539

10.  Proteomic analysis of the mammalian nuclear pore complex.

Authors:  Janet M Cronshaw; Andrew N Krutchinsky; Wenzhu Zhang; Brian T Chait; Michael J Matunis
Journal:  J Cell Biol       Date:  2002-08-26       Impact factor: 10.539

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  94 in total

Review 1.  New insights into the regulation of RNP granule assembly in oocytes.

Authors:  Jennifer A Schisa
Journal:  Int Rev Cell Mol Biol       Date:  2012       Impact factor: 6.813

2.  The DEAD box helicase RDE-12 promotes amplification of RNAi in cytoplasmic foci in C. elegans.

Authors:  Huan Yang; Jim Vallandingham; Philip Shiu; Hua Li; Craig P Hunter; Ho Yi Mak
Journal:  Curr Biol       Date:  2014-03-27       Impact factor: 10.834

Review 3.  Cell Biology of the Caenorhabditis elegans Nucleus.

Authors:  Orna Cohen-Fix; Peter Askjaer
Journal:  Genetics       Date:  2017-01       Impact factor: 4.562

4.  Double-stranded RNA made in C. elegans neurons can enter the germline and cause transgenerational gene silencing.

Authors:  Sindhuja Devanapally; Snusha Ravikumar; Antony M Jose
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-02       Impact factor: 11.205

Review 5.  RNA granules in germ cells.

Authors:  Ekaterina Voronina; Geraldine Seydoux; Paolo Sassone-Corsi; Ippei Nagamori
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-12-01       Impact factor: 10.005

6.  Distinct roles of two eIF4E isoforms in the germline of Caenorhabditis elegans.

Authors:  Hayden P Huggins; Jacob S Subash; Hamilton Stoffel; Melissa A Henderson; Jenna L Hoffman; David S Buckner; Madhu S Sengupta; Peter R Boag; Myon-Hee Lee; Brett D Keiper
Journal:  J Cell Sci       Date:  2020-03-30       Impact factor: 5.285

7.  CSR-1 and P granules suppress sperm-specific transcription in the C. elegans germline.

Authors:  Anne C Campbell; Dustin L Updike
Journal:  Development       Date:  2015-05-15       Impact factor: 6.868

8.  The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics.

Authors:  Shana Elbaum-Garfinkle; Younghoon Kim; Krzysztof Szczepaniak; Carlos Chih-Hsiung Chen; Christian R Eckmann; Sua Myong; Clifford P Brangwynne
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-26       Impact factor: 11.205

9.  Germ Granules Coordinate RNA-Based Epigenetic Inheritance Pathways.

Authors:  Anne E Dodson; Scott Kennedy
Journal:  Dev Cell       Date:  2019-08-08       Impact factor: 12.270

Review 10.  Effects of stress and aging on ribonucleoprotein assembly and function in the germ line.

Authors:  Jennifer A Schisa
Journal:  Wiley Interdiscip Rev RNA       Date:  2013-11-13       Impact factor: 9.957

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