Literature DB >> 33866636

Identification of new Anopheles gambiae transcriptional enhancers using a cross-species prediction approach.

I Schember1, M S Halfon1,2,3,4,5.   

Abstract

The success of transgenic mosquito vector control approaches relies on well-targeted gene expression, requiring the identification and characterization of a diverse set of mosquito promoters and transcriptional enhancers. However, few enhancers have been characterized in Anopheles gambiae to date. Here, we employ the SCRMshaw method we previously developed to predict enhancers in the A. gambiae genome, preferentially targeting vector-relevant tissues such as the salivary glands, midgut and nervous system. We demonstrate a high overall success rate, with at least 8 of 11 (73%) tested sequences validating as enhancers in an in vivo xenotransgenic assay. Four tested sequences drive expression in either the salivary gland or the midgut, making them directly useful for probing the biology of these infection-relevant tissues. The success of our study suggests that computational enhancer prediction should serve as an effective means for identifying A. gambiae enhancers with activity in tissues involved in malaria propagation and transmission.
© 2021 Royal Entomological Society.

Entities:  

Keywords:  Drosophila melanogaster; cis-regulatory element; computational enhancer prediction; cross-species enhancer discovery; malaria; mosquito control; regulatory genomics; vector biology

Mesh:

Year:  2021        PMID: 33866636      PMCID: PMC8266755          DOI: 10.1111/imb.12705

Source DB:  PubMed          Journal:  Insect Mol Biol        ISSN: 0962-1075            Impact factor:   3.424


  68 in total

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