Literature DB >> 33853671

Addressing widespread misidentifications of traditional medicinal mushrooms in Sanghuangporus (Basidiomycota) through ITS barcoding and designation of reference sequences.

Shan Shen1,2, Shi-Liang Liu1, Ji-Hang Jiang1, Li-Wei Zhou3,4.   

Abstract

"Sanghuang" refers to a group of important traditionally-used medicinal mushrooms belonging to the genus Sanghuangporus. In practice, species of Sanghuangporus referred to in medicinal studies and industry are now differentiated mainly by a BLAST search of GenBank with the ITS barcoding region as a query. However, inappropriately labeled ITS sequences of "Sanghuang" in GenBank restrict accurate species identification and, to some extent, the utilization of these species as medicinal resources. We examined all available 271 ITS sequences related to "Sanghuang" in GenBank including 31 newly submitted sequences from this study. Of these sequences, more than half were mislabeled so we have now corrected the corresponding species names. The mislabeled sequences mainly came from strains utilized by non-taxonomists. Based on the analyses of ITS sequences submitted by taxonomists as well as morphological characters, we separate the newly described Sanghuangporus subbaumii from S. baumii and treat S. toxicodendri as a later synonym of S. quercicola. Fourteen species of Sanghuangporus are accepted, with intraspecific distances up to 1.30% (except in S. vaninii, S. weirianus and S. zonatus) and interspecific distances above 1.30% (except between S. alpinus and S. lonicerinus, and S. baumii and S. subbaumii). To stabilize the concept of these 14 species of Sanghuangporus, their taxonomic information and reliable ITS reference sequences are provided. Moreover, ten potential diagnostic sequences are provided for Hyperbranched Rolling Circle Amplification to rapidly confirm three common commercial species, viz. S. baumii, S. sanghuang, and S. vaninii. Our results provide a practical method for ITS barcoding-based species identification of Sanghuangporus and will promote medicinal studies and commercial development from taxonomically correct material.

Entities:  

Keywords:  Hymenochaetaceae; One new taxon; Phylogeny; Species boundary; Taxonomy; Wood-inhabiting fungi

Year:  2021        PMID: 33853671     DOI: 10.1186/s43008-021-00059-x

Source DB:  PubMed          Journal:  IMA Fungus        ISSN: 2210-6340            Impact factor:   3.515


  31 in total

1.  A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood.

Authors:  Stéphane Guindon; Olivier Gascuel
Journal:  Syst Biol       Date:  2003-10       Impact factor: 15.683

2.  Universal identification of lethal amanitas by using Hyperbranched rolling circle amplification based on α-amanitin gene sequences.

Authors:  Zhengmi He; Tao Luo; Fengxia Fan; Ping Zhang; Zuohong Chen
Journal:  Food Chem       Date:  2019-06-17       Impact factor: 7.514

3.  ITS primers with enhanced specificity for basidiomycetes--application to the identification of mycorrhizae and rusts.

Authors:  M Gardes; T D Bruns
Journal:  Mol Ecol       Date:  1993-04       Impact factor: 6.185

4.  Sesquiterpenes from an Eastern African Medicinal Mushroom Belonging to the Genus Sanghuangporus.

Authors:  Tian Cheng; Clara Chepkirui; Cony Decock; Josphat Clement Matasyoh; Marc Stadler
Journal:  J Nat Prod       Date:  2019-04-19       Impact factor: 4.050

5.  MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Mol Biol Evol       Date:  2013-01-16       Impact factor: 16.240

6.  MAFFT version 5: improvement in accuracy of multiple sequence alignment.

Authors:  Kazutaka Katoh; Kei-ichi Kuma; Hiroyuki Toh; Takashi Miyata
Journal:  Nucleic Acids Res       Date:  2005-01-20       Impact factor: 16.971

7.  Multi-rate Poisson tree processes for single-locus species delimitation under maximum likelihood and Markov chain Monte Carlo.

Authors:  P Kapli; S Lutteropp; J Zhang; K Kobert; P Pavlidis; A Stamatakis; T Flouri
Journal:  Bioinformatics       Date:  2017-06-01       Impact factor: 6.937

8.  Extraction and antioxidant activity of total triterpenoids in the mycelium of a medicinal fungus, Sanghuangporus sanghuang.

Authors:  Chengshan Cai; Jiexin Ma; Chunrui Han; Yi Jin; Guozhu Zhao; Xiangwei He
Journal:  Sci Rep       Date:  2019-05-15       Impact factor: 4.379

9.  Development and Evaluation of Isothermal Amplification Methods for Rapid Detection of Lethal Amanita Species.

Authors:  Zhengmi He; Yuting Su; Sainan Li; Pan Long; Ping Zhang; Zuohong Chen
Journal:  Front Microbiol       Date:  2019-07-03       Impact factor: 5.640

10.  Whole-genome sequence of Phellinus gilvus (mulberry Sanghuang) reveals its unique medicinal values.

Authors:  Jinxi Huo; Shi Zhong; Xin Du; Yinglong Cao; Wenqiong Wang; Yuqing Sun; Yu Tian; Jianxun Zhu; Jine Chen; Lijiang Xuan; Chongming Wu; Yougui Li
Journal:  J Adv Res       Date:  2020-04-28       Impact factor: 10.479

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  2 in total

Review 1.  What is the correct scientific name for "Fuling" medicinal mushroom?

Authors:  Viktor Papp; Yu-Cheng Dai
Journal:  Mycology       Date:  2022-06-20

Review 2.  Current advances and potential trends of the polysaccharides derived from medicinal mushrooms sanghuang.

Authors:  Hao Wang; Jin-Xin Ma; Miao Zhou; Jing Si; Bao-Kai Cui
Journal:  Front Microbiol       Date:  2022-08-03       Impact factor: 6.064

  2 in total

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