| Literature DB >> 33832141 |
Sihyung Park1, Bong Soo Park1, Yoo Jin Lee1, Il Hwan Kim1, Jin Han Park1, Junghae Ko1, Yang Wook Kim1, Kang Min Park2.
Abstract
BACKGROUND: Artificial intelligence (AI) has had a significant impact on our lives and plays many roles in various fields. By analyzing the past 30 years of AI trends in the field of nephrology, using a bibliography, we wanted to know the areas of interest and future direction of AI in research related to the kidney.Entities:
Mesh:
Year: 2021 PMID: 33832141 PMCID: PMC8036048 DOI: 10.1097/MD.0000000000025422
Source DB: PubMed Journal: Medicine (Baltimore) ISSN: 0025-7974 Impact factor: 1.817
Figure 1Flowchart of analyzed and excluded articles.
Figure 2Topics within the top-fifty most-cited articles. From 1990 to 1999, the articles focused on acute kidney injuries, chronic kidney disease, renal cancer, glomerular disease, and transplantation. After 2000, topics regarding dialysis, kidney stones, GFR measures, and kidney images were newly noted. After 2010, topics with polycystic kidney disease, renal pathology, and drug toxicity were newly nominated, and the number of articles about other topics increased.
Top-fifty most-cited articles with titles, first authors, institutions, nationalities, source titles, publication years, and citation numbers.
| Rank | Title | 1st author | Institute/ Nationality | Source titles | Publi-cation year | No. of citati-ons |
| 1 | Pattern analysis of serum proteome distinguishes renal cell carcinoma from other urologic diseases and healthy persons | Yonggwan Won | Chonnam National University Medical School/ South Korea | Proteomics | 2003 | 84 |
| 2 | Defining cell-type specificity at the transcriptional level in human disease | Wenjun Ju | University of Michigan/ USA | Genome research | 2013 | 83 |
| 3 | Fast neural network learning algorithms for medical applications | Ahmad Taher Azar | Misr University for Science and Technology/ Egypt | Neural computing and applications | 2013 | 61 |
| 4 | Application of irregular and unbalanced data to predict diabetic nephropathy using visualization and feature selection methods | Baek Hwan Cho | Hanyang University/ South Korea | Artificial intelligence in medicine | 2008 | 55 |
| 5 | Prediction of drug-induced nephrotoxicity and injury mechanisms with human induced pluripotent stem cell-derived cells and machine learning methods | Karthikeyan Kandasamy | Institute of Bioengineering and Nanotechnology/ Singapore | Scientific reports | 2015 | 40 |
| 6 | Texture analysis as a radiomic marker for differentiating renal tumors | HeiShun Yu | Boston Medical Center/ USA | Abdominal radiology | 2007 | 34 |
| 7 | Application of Machine Learning Techniques to High-Dimensional Clinical Data to Forecast Postoperative Complications | Paul Thottakkara | University of Florida/ USA | Plos One | 2016 | 32 |
| 8 | Incorporating temporal EHR data in predictive models for risk stratification of renal function deterioration | Anima Singh | Massachusetts Institute of Technology/ USA | Journal Of Biomedical Informatics | 2015 | 31 |
| 8 | Biomarker discovery with SELDI-TOF MS in human urine associated with early renal injury: Evaluation with computational analytical tools | Kurt J.A. Vanhoutte | Radboud University Nijmegen Medical Centre/ Netherlands | Nephrology dialysis transplantation | 2007 | 31 |
| 10 | Machine learning-based quantitative texture analysis of CT images of small renal masses: Differentiation of angiomyolipoma without visible fat from renal cell carcinoma | Zhichao Feng | Central South University/ China | European radiology | 2018 | 28 |
| 11 | The Development of a Machine Learning Inpatient Acute Kidney Injury Prediction Model | Koyner Jay L. | University of Chicago/ USA | Critical care medicine | 2018 | 26 |
| 12 | Prediction and detection models for acute kidney injury in hospitalized older adults | Rohit J. Kate | University of Wisconsin-Milwaukee/ USA | BMC medical informatics and decision making | 2016 | 26 |
| 13 | Constructing a nutrition diagnosis expert system | Yuchuan Chen | Taipei Medical University/ Taiwan | Expert Systems With Applications | 2012 | 25 |
| 14 | The Pattern of Longitudinal Change in Serum Creatinine and 90-Day Mortality After Major Surgery | Dmytro Korenkevych | University of Florida/ USA | Annals Of Surgery | 2016 | 24 |
| 14 | Medical multiparametric time course prognoses applied to kidney function assessments | Rainer Schmidt | University of Rostock/ Germany | International Journal Of Medical Informatics | 1999 | 24 |
| 16 | High-throughput imaging-based nephrotoxicity prediction for xenobiotics with diverse chemical structures | Ran Su | Bioinformatics Institute/ Singapore | Archives of toxicology | 2016 | 23 |
| 16 | Incidence, risk factors and prediction of post-operative acute kidney injury following cardiac surgery for active infective endocarditis: an observational study | Matthieu Legrand | Université Paris Descartes/ France | Critical Care | 2013 | 23 |
| 16 | Evolving connectionist system versus algebraic formulas for prediction of renal function from serum creatinine | Mark Roger Marshall | Auckland University of Technology/ New Zealand | Kidney International | 2005 | 23 |
| 19 | Assessing rejection-related disease in kidney transplant biopsies based on archetypal analysis of molecular phenotypes | Jeff Reeve | University of Alberta/ Canada | JCI insight | 2017 | 22 |
| 20 | Deep Semantic Segmentation of Kidney and Space-Occupying Lesion Area Based on SCNN and ResNet Models Combined with SIFT-Flow Algorithm | Kai-jian Xia | China University of Mining and Technology/ China | Journal Of Medical Systems | 2019 | 21 |
| 20 | An end stage kidney disease predictor based on an artificial neural networks ensemble | Tommaso Di Noia | Polytechnic University of Bari/ Italy | Expert systems with applications | 2013 | 21 |
| 22 | Detecting repeated cancer evolution from multiregion tumor sequencing data | Giulio Caravagna | Institute of Cancer Research/ UK | Nature Methods | 2018 | 20 |
| 22 | Performance of an Artificial Multi-observer Deep Neural Network for Fully Automated Segmentation of Polycystic Kidneys | Timothy L. Kline | Mayo Clinic College of Medicine/ USA | Journal Of Digital Imaging | 2017 | 20 |
| 22 | Automatic Segmentation of Kidneys using Deep Learning for Total Kidney Volume Quantification in Autosomal Dominant Polycystic Kidney Disease | Kanishka Sharma | IRCCS-Istituto di Ricerche Farmacologiche Mario Negri/ Italy | Scientific Reports | 2017 | 20 |
| 25 | Bayesian Modeling of Pretransplant Variables Accurately Predicts Kidney Graft Survival | Brown T.S. | Naval Medical Research Center/ USA | American Journal Of Nephrology | 2012 | 19 |
| 25 | Classification strategies for the grading of renal cell carcinomas, based on nuclear morphometry and densitometry | Christine François | Université Libre de Bruxelles/ Belgium | Journal Of Pathology | 1997 | 18 |
| 25 | ADMET Evaluation in Drug Discovery. 18. Reliable Prediction of Chemical-Induced Urinary Tract Toxicity by Boosting Machine Learning-Approaches | Tailong Lei | Zhejiang University/ China | Molecular Pharmaceutics | 2017 | 18 |
| 28 | A medical decision support system for disease diagnosis under uncertainty | Behnam Malmir | Kansas State University/ USA | Expert Systems With Applications | 2017 | 17 |
| 28 | Diagnosis of Chronic Kidney Disease Based on Support Vector Machine by Feature Selection Methods | Huseyin Polat | Gazi University/ Turkey | Journal of medical systems | 2017 | 17 |
| 28 | Artificial intelligence: A new approach for prescription and monitoring of hemodialysis therapy | Ahmed l. Akl | Mansoura University/ Egypt | American Journal Of Kidney Diseases | 2001 | 17 |
| 31 | A clinically applicable approach to continuous prediction of future acute kidney injury | Nenad Tomašev | DeepMind/ UK | Nature | 2019 | 16 |
| 31 | Quantitative Ultrasound for Measuring Obstructive Severity in Children with Hydronephrosis | Juan J. Cerrolaza | Children's National Health System/ USA | Journal of urology | 2016 | 16 |
| 31 | Prediction of delayed graft function after kidney transplantation: comparison between logistic regression and machine learning methods | Alexander Decruyenaere | Ghent University Hospital/ Belgium | BMC medical informatics and decision making | 2015 | 16 |
| 31 | Supervised prediction of drug-induced nephrotoxicity based on interleukin-6 and-8 expression levels | Ran Su | Bioinfromatics Institute/ Singapore | BMC bioinformatics | 2014 | 16 |
| 31 | A prognostic model for temporal courses that combines temporal abstraction and case-based reasoning | Rainer Schmidt | Universität Rostock/ Germany | International Journal Of Medical Informatics | 2005 | 16 |
| 31 | Cardiac risk stratification in renal transplantation using a form of artificial intelligence | Thomas F Heston | Oregon Health Sciences University/ USA | American Journal Of Cardiology | 1997 | 16 |
| 37 | Computer-aided detection of exophytic renal lesions on non-contrast CT images | Jianfei Liu | National Institutes of Health Clinical Center/ USA | Medical Image Analysis | 2015 | 15 |
| 37 | Optimization of anemia treatment in hemodialysis patients via reinforcement learning | Pablo Escandell-Montero | University of Valencia/ Spain | Artificial intelligence in medicine | 2014 | 15 |
| 37 | A novel approach for accurate prediction of spontaneous passage of ureteral stones: Support vector machines | F Dal Moro | University of Padova/ Italy | Kidney International | 2006 | 15 |
| 40 | Decision tree and random forest models for outcome prediction in antibody incompatible kidney transplantation | Torgyn Shaikhina | University of Warwick/ UK | Biomedical Signal Processing And Control | 2019 | 14 |
| 40 | Radiogenomics in Clear Cell Renal Cell Carcinoma: Machine Learning-Based High-Dimensional Quantitative CT Texture Analysis in Predicting PBRM1 Mutation Status | Burak Kocak | Istanbul Training and Research Hospital/ Turkey | American Journal Of Roentgenology | 2019 | 14 |
| 40 | Clear Cell Renal Cell Carcinoma: Machine Learning-Based Quantitative Computed Tomography Texture Analysis for Prediction of Fuhrman Nuclear Grade | Ceyda Turan Bektas | Istanbul Training and Research Hospital/ Turkey | European Radiology | 2019 | 14 |
| 40 | Development of Biomarker Models to Predict Outcomes in Lupus Nephritis | Bethany J. Wolf | Medical University of South Carolina/ USA | Arthritis & Rheumatology | 2016 | 14 |
| 40 | Ratsnake: A Versatile Image Annotation Tool with Application to Computer-Aided Diagnosis | D.K. Iakovidis | Technological Educational Institute of Lamia/ Greece | Scientific World Journal | 2014 | 14 |
| 45 | Textural differences between renal cell carcinoma subtypes: Machine learning-based quantitative computed tomography texture analysis with independent external validation | Burak Kocak | Istanbul Training and Research Hospital/ Turkey | European Journal Of Radiology | 2018 | 13 |
| 45 | An international observational study suggests that artificial intelligence for clinical decision support optimizes anemia management in hemodialysis patients | Carlo Barbieri | Fresenius Medical Care/ Germany | Kidney international | 2016 | 13 |
| 45 | Efficient Small Blob Detection Based on Local Convexity, Intensity and Shape Information | Min Zhang | Mayo Clinic/ USA | IEEE transactions on medical imaging | 2016 | 13 |
| 48 | Calibration drift in regression and machine learning models for acute kidney injury | Sharon E Davis | Vanderbilt University School of Medicine/ USA | Journal of the American medical informatics association | 2017 | 12 |
| 48 | Differentiation of fat-poor angiomyolipoma from clear cell renal cell carcinoma in contrast-enhanced MDCT images using quantitative feature classification | Han Sang Lee | Korea Advanced Institute of Science and Technology/ South Korea | Medical Physics | 2017 | 12 |
| 48 | Application of rough set classifiers for determining hemodialysis adequacy in ESRD patients | You-Shyang Chen | Hwa Hsia Institute of Technology /Taiwan | Knowledge And Information Systems | 2013 | 12 |
CT = computed tomograpghy, ESRD = End stage renal disease, IEEE = Institute of Electrical and Electronics Engineers, MDCT = Multi Detector Computed Tomography, SCNN = Siamese Convolutional neural network.
Figure 3Machine-learning algorithms within the top-fifty most-cited articles. Various artificial intelligence algorithms are listed. Support vector machines, neural networks, and random forests are widely used. Of the 13 neural-network types, five were artificial neural networks and two were convolutional neural networks; the remaining were recurrent neural networks and sparse convolutional networks. The remaining algorithms used the following models: archetypal analysis, Bayesian belief network, Bayesian generalized linear network, C5.0 trees, efficient belief propagation, eXtreme gradient boosting, fitted Q iteration, generalized linear model, gradient boosting machine, Hessian-based difference of Gaussians, hierarchical clustering, ID3, kernel classifier, k-means, k-NN classifier, LIBSVM, linear discriminant analysis, manifold diffusion, Markov decision process, multitask temporal, Nguyen-Widrow initialization, polynomial linear model, Q learning, quadratic discriminant analysis, relevance vector machine, REVOLVER, and a variational Bayesian–Gaussian mixture model. ID3 = iterative dichotomiser, LIBSVM = library for support vector machines, REVOLVER = repeated evolution in cancer.