Literature DB >> 33823087

A Bayesian mixture model for changepoint estimation using ordinal predictors.

Emily Roberts1, Lili Zhao1.   

Abstract

In regression models, predictor variables with inherent ordering, such ECOG performance status or novel biomarker expression levels, are commonly seen in medical settings. Statistically, it may be difficult to determine the functional form of an ordinal predictor variable. Often, such a variable is dichotomized based on whether it is above or below a certain cutoff. Other methods conveniently treat the ordinal predictor as a continuous variable and assume a linear relationship with the outcome. However, arbitrarily choosing a method may lead to inaccurate inference and treatment. In this paper, we propose a Bayesian mixture model to consider both dichotomous and linear forms for the variable. This allows for simultaneous assessment of the appropriate form of the predictor in regression models by considering the presence of a changepoint through the lens of a threshold detection problem. This method is applicable to continuous, binary, and survival outcomes, and it is easily amenable to penalized regression. We evaluated the proposed method using simulation studies and apply it to two real datasets. We provide JAGS code for easy implementation.
© 2021 Walter de Gruyter GmbH, Berlin/Boston.

Entities:  

Keywords:  Bayesian methods; changepoints; mixture model; ordinal predictors; regression model

Mesh:

Year:  2021        PMID: 33823087      PMCID: PMC9156335          DOI: 10.1515/ijb-2020-0151

Source DB:  PubMed          Journal:  Int J Biostat        ISSN: 1557-4679            Impact factor:   1.829


  8 in total

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8.  Tumor mutational burden predicts survival in patients with low-grade gliomas expressing mutated IDH1.

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Journal:  J Immunother Cancer       Date:  2021-07       Impact factor: 13.751

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