Literature DB >> 33813159

Introducing noncanonical amino acids for studying and engineering bacterial microcompartments.

Hao Chen1, Jessica Wilson1, Sara Ottinger2, Qinglei Gan2, Chenguang Fan3.   

Abstract

Bacterial microcompartments (BMCs) with selectively permeable shells and encapsulated enzyme cores are well-suited candidates for nano-bioreactors because of their advantages of enhancing pathway flux and protection against toxic products. To better study and engineer protein-based BMCs, a series of protein chemistry approaches are adopted. As one of the most advanced techniques, genetic code expansion can introduce various noncanonical amino acids (ncAAs) with diverse functional groups into target proteins, thus providing powerful tools for protein studies and engineering. This review summarizes and proposes useful tools based on current development of the genetic code expansion technique towards challenges in BMC studies and engineering.
Copyright © 2021 Elsevier Ltd. All rights reserved.

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Year:  2021        PMID: 33813159      PMCID: PMC8169543          DOI: 10.1016/j.mib.2021.03.004

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.584


  47 in total

1.  Click Chemistry: Diverse Chemical Function from a Few Good Reactions.

Authors:  Hartmuth C. Kolb; M. G. Finn; K. Barry Sharpless
Journal:  Angew Chem Int Ed Engl       Date:  2001-06-01       Impact factor: 15.336

Review 2.  Engineered bacterial microcompartments: apps for programming metabolism.

Authors:  Cheryl A Kerfeld; Markus Sutter
Journal:  Curr Opin Biotechnol       Date:  2020-06-15       Impact factor: 9.740

Review 3.  Biotechnological Advances in Bacterial Microcompartment Technology.

Authors:  Matthew J Lee; David J Palmer; Martin J Warren
Journal:  Trends Biotechnol       Date:  2018-09-17       Impact factor: 19.536

4.  Self-assembling Shell Proteins PduA and PduJ have Essential and Redundant Roles in Bacterial Microcompartment Assembly.

Authors:  Nolan W Kennedy; Svetlana P Ikonomova; Marilyn Slininger Lee; Henry W Raeder; Danielle Tullman-Ercek
Journal:  J Mol Biol       Date:  2020-11-21       Impact factor: 5.469

Review 5.  Prokaryotic Organelles: Bacterial Microcompartments in E. coli and Salmonella.

Authors:  Katie L Stewart; Andrew M Stewart; Thomas A Bobik
Journal:  EcoSal Plus       Date:  2020-10

6.  Construction of Recombinant Pdu Metabolosome Shells for Small Molecule Production in Corynebacterium glutamicum.

Authors:  Isabel Huber; David J Palmer; Kira N Ludwig; Ian R Brown; Martin J Warren; Julia Frunzke
Journal:  ACS Synth Biol       Date:  2017-09-01       Impact factor: 5.110

7.  Trapping biosynthetic acyl-enzyme intermediates with encoded 2,3-diaminopropionic acid.

Authors:  Nicolas Huguenin-Dezot; Diego A Alonzo; Graham W Heberlig; Mohan Mahesh; Duy P Nguyen; Mark H Dornan; Christopher N Boddy; T Martin Schmeing; Jason W Chin
Journal:  Nature       Date:  2018-12-12       Impact factor: 49.962

8.  Expanding the genetic code of Salmonella with non-canonical amino acids.

Authors:  Qinglei Gan; Brent P Lehman; Thomas A Bobik; Chenguang Fan
Journal:  Sci Rep       Date:  2016-12-23       Impact factor: 4.379

9.  Effect of metabolosome encapsulation peptides on enzyme activity, coaggregation, incorporation, and bacterial microcompartment formation.

Authors:  Rokas Juodeikis; Matthew J Lee; Matthias Mayer; Judith Mantell; Ian R Brown; Paul Verkade; Derek N Woolfson; Michael B Prentice; Stefanie Frank; Martin J Warren
Journal:  Microbiologyopen       Date:  2020-02-13       Impact factor: 3.139

10.  Apparent size and morphology of bacterial microcompartments varies with technique.

Authors:  Nolan W Kennedy; Jasmine M Hershewe; Taylor M Nichols; Eric W Roth; Charlene D Wilke; Carolyn E Mills; Michael C Jewett; Danielle Tullman-Ercek
Journal:  PLoS One       Date:  2020-03-09       Impact factor: 3.240

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  1 in total

1.  Vertex protein PduN tunes encapsulated pathway performance by dictating bacterial metabolosome morphology.

Authors:  Carolyn E Mills; Curt Waltmann; Andre G Archer; Nolan W Kennedy; Charlotte H Abrahamson; Alexander D Jackson; Eric W Roth; Sasha Shirman; Michael C Jewett; Niall M Mangan; Monica Olvera de la Cruz; Danielle Tullman-Ercek
Journal:  Nat Commun       Date:  2022-06-29       Impact factor: 17.694

  1 in total

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