Literature DB >> 33811262

Hymenobacter citatus sp. nov., isolated from soil in South Korea.

Yuna Park1, Yoonjee Chang2, Myung Kyum Kim3.   

Abstract

Two novel Gram-negative bacterial strains, BT507T and BT506, were isolated from soil collected in Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that both strains BT507T and BT506 belong to a distinct lineage within the genus Hymenobacter (family Hymenobacteraceae; order Cytophagales; class Cytophagia). The 16S rRNA genes of the two strains shared a sequence similarity of 100.0%. Strains BT507T and BT506 are closely related to Hymenobacter profundi M2T (97.2% 16S rRNA gene similarity), Hymenobacter defluvii POA9T (97.1%), and Hymenobacter tenuis POB6T (95.3%). The genome size of strain BT507T is 5,078,289 base pairs. Bacterial growth was observed at 10-37 °C (optimum 25 °C) and pH 6.0-8.0 (optimum pH 6.0). The primary cellular fatty acids of strain BT507T are iso-C15:0, C16:1ω5c, and summed feature 3 (C16:1ω6c/C16:1ω7c). Its predominant respiratory quinone is MK-7. The primary polar lipids of strain BT507T are lipid, aminophospholipid, and phosphatidylethanolamine. Based on the biochemical, chemotaxonomic, and phylogenetic analysis, strains BT507T and BT506 can be described a novel bacterial species within the genus Hymenobacter, and the proposed name is Hymenobacter citatus. The type strain of H. citatus is BT507T is KCTC 82115T and NBRC 114850T.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Hymenobacter; Hymenobacteraceae; Novel species; Taxonomy

Year:  2021        PMID: 33811262     DOI: 10.1007/s00203-021-02298-3

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  6 in total

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Journal:  J Comput Biol       Date:  2012-04-16       Impact factor: 1.479

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Authors:  S Oseid
Journal:  Tidsskr Nor Laegeforen       Date:  1966-07-15

3.  Hymenobacter profundi sp. nov., isolated from deep-sea water.

Authors:  Jingjing Sun; Mengxin Xing; Wei Wang; Fangqun Dai; Junzhong Liu; Jianhua Hao
Journal:  Int J Syst Evol Microbiol       Date:  2018-03       Impact factor: 2.747

4.  Hymenobacter defluvii sp. nov., isolated from wastewater of an acidic water neutralization facility.

Authors:  Joo Won Kang; Seon Choi; Han Na Choe; Chi Nam Seong
Journal:  Int J Syst Evol Microbiol       Date:  2017-11-17       Impact factor: 2.747

5.  Hymenobacter tenuis sp. nov., isolated from wastewater of an acidic water neutralization facility.

Authors:  Joo Won Kang; Ji Hee Lee; Han Na Choe; Chi Nam Seong
Journal:  Int J Syst Evol Microbiol       Date:  2017-07-08       Impact factor: 2.747

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Journal:  Nucleic Acids Res       Date:  2016-06-24       Impact factor: 16.971

  6 in total
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1.  Hymenobacter cyanobacteriorum sp. nov., isolated from a freshwater reservoir during the cyanobacterial bloom period.

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Journal:  Arch Microbiol       Date:  2022-06-06       Impact factor: 2.667

  1 in total

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