Literature DB >> 33807542

RNA-Binding Proteins and the Complex Pathophysiology of ALS.

Wanil Kim1, Do-Yeon Kim2, Kyung-Ha Lee1.   

Abstract

Genetic analyses of patients with amyotrophic lateral sclerosis (ALS) have identified disease-causing mutations and accelerated the unveiling of complex molecular pathogenic mechanisms, which may be important for understanding the disease and developing therapeutic strategies. Many disease-related genes encode RNA-binding proteins, and most of the disease-causing RNA or proteins encoded by these genes form aggregates and disrupt cellular function related to RNA metabolism. Disease-related RNA or proteins interact or sequester other RNA-binding proteins. Eventually, many disease-causing mutations lead to the dysregulation of nucleocytoplasmic shuttling, the dysfunction of stress granules, and the altered dynamic function of the nucleolus as well as other membrane-less organelles. As RNA-binding proteins are usually components of several RNA-binding protein complexes that have other roles, the dysregulation of RNA-binding proteins tends to cause diverse forms of cellular dysfunction. Therefore, understanding the role of RNA-binding proteins will help elucidate the complex pathophysiology of ALS. Here, we summarize the current knowledge regarding the function of disease-associated RNA-binding proteins and their role in the dysfunction of membrane-less organelles.

Entities:  

Keywords:  ALS; RNA-binding protein; membrane-less organelles

Mesh:

Substances:

Year:  2021        PMID: 33807542      PMCID: PMC7961459          DOI: 10.3390/ijms22052598

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  167 in total

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Authors:  Shanye Yin; Rodrigo Lopez-Gonzalez; Ryan C Kunz; Jaya Gangopadhyay; Carl Borufka; Steven P Gygi; Fen-Biao Gao; Robin Reed
Journal:  Cell Rep       Date:  2017-06-13       Impact factor: 9.423

2.  ALS-linked mutations enlarge TDP-43-enriched neuronal RNA granules in the dendritic arbor.

Authors:  Liqun Liu-Yesucevitz; Amy Y Lin; Atsushi Ebata; Joon Y Boon; Whitney Reid; Ya-Fei Xu; Kendra Kobrin; George J Murphy; Leonard Petrucelli; Benjamin Wolozin
Journal:  J Neurosci       Date:  2014-03-19       Impact factor: 6.167

3.  UsnRNP trafficking is regulated by stress granules and compromised by mutant ALS proteins.

Authors:  Simona Rossi; Valentina Rompietti; Ylenia Antonucci; Daniela Giovannini; Chiara Scopa; Silvia Scaricamazza; Raffaella Scardigli; Gianluca Cestra; Annalucia Serafino; Maria Teresa Carrì; Nadia D'Ambrosi; Mauro Cozzolino
Journal:  Neurobiol Dis       Date:  2020-02-04       Impact factor: 5.996

4.  A yeast functional screen predicts new candidate ALS disease genes.

Authors:  Julien Couthouis; Michael P Hart; James Shorter; Mariely DeJesus-Hernandez; Renske Erion; Rachel Oristano; Annie X Liu; Daniel Ramos; Niti Jethava; Divya Hosangadi; James Epstein; Ashley Chiang; Zamia Diaz; Tadashi Nakaya; Fadia Ibrahim; Hyung-Jun Kim; Jennifer A Solski; Kelly L Williams; Jelena Mojsilovic-Petrovic; Caroline Ingre; Kevin Boylan; Neill R Graff-Radford; Dennis W Dickson; Dana Clay-Falcone; Lauren Elman; Leo McCluskey; Robert Greene; Robert G Kalb; Virginia M-Y Lee; John Q Trojanowski; Albert Ludolph; Wim Robberecht; Peter M Andersen; Garth A Nicholson; Ian P Blair; Oliver D King; Nancy M Bonini; Vivianna Van Deerlin; Rosa Rademakers; Zissimos Mourelatos; Aaron D Gitler
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-07       Impact factor: 11.205

Review 5.  Paraspeckles: Where Long Noncoding RNA Meets Phase Separation.

Authors:  Archa H Fox; Shinichi Nakagawa; Tetsuro Hirose; Charles S Bond
Journal:  Trends Biochem Sci       Date:  2017-12-27       Impact factor: 13.807

Review 6.  Matter over mind: Liquid phase separation and neurodegeneration.

Authors:  Shana Elbaum-Garfinkle
Journal:  J Biol Chem       Date:  2019-03-26       Impact factor: 5.157

7.  GGGGCC repeat expansion in C9orf72 compromises nucleocytoplasmic transport.

Authors:  Brian D Freibaum; Yubing Lu; Rodrigo Lopez-Gonzalez; Nam Chul Kim; Sandra Almeida; Kyung-Ha Lee; Nisha Badders; Marc Valentine; Bruce L Miller; Philip C Wong; Leonard Petrucelli; Hong Joo Kim; Fen-Biao Gao; J Paul Taylor
Journal:  Nature       Date:  2015-08-26       Impact factor: 49.962

8.  C9orf72 BAC Transgenic Mice Display Typical Pathologic Features of ALS/FTD.

Authors:  Jacqueline G O'Rourke; Laurent Bogdanik; A K M G Muhammad; Tania F Gendron; Kevin J Kim; Andrew Austin; Janet Cady; Elaine Y Liu; Jonah Zarrow; Sharday Grant; Ritchie Ho; Shaughn Bell; Sharon Carmona; Megan Simpkinson; Deepti Lall; Kathryn Wu; Lillian Daughrity; Dennis W Dickson; Matthew B Harms; Leonard Petrucelli; Edward B Lee; Cathleen M Lutz; Robert H Baloh
Journal:  Neuron       Date:  2015-12-02       Impact factor: 17.173

9.  A hexanucleotide repeat expansion in C9ORF72 is the cause of chromosome 9p21-linked ALS-FTD.

Authors:  Alan E Renton; Elisa Majounie; Adrian Waite; Javier Simón-Sánchez; Sara Rollinson; J Raphael Gibbs; Jennifer C Schymick; Hannu Laaksovirta; John C van Swieten; Liisa Myllykangas; Hannu Kalimo; Anders Paetau; Yevgeniya Abramzon; Anne M Remes; Alice Kaganovich; Sonja W Scholz; Jamie Duckworth; Jinhui Ding; Daniel W Harmer; Dena G Hernandez; Janel O Johnson; Kin Mok; Mina Ryten; Danyah Trabzuni; Rita J Guerreiro; Richard W Orrell; James Neal; Alex Murray; Justin Pearson; Iris E Jansen; David Sondervan; Harro Seelaar; Derek Blake; Kate Young; Nicola Halliwell; Janis Bennion Callister; Greg Toulson; Anna Richardson; Alex Gerhard; Julie Snowden; David Mann; David Neary; Michael A Nalls; Terhi Peuralinna; Lilja Jansson; Veli-Matti Isoviita; Anna-Lotta Kaivorinne; Maarit Hölttä-Vuori; Elina Ikonen; Raimo Sulkava; Michael Benatar; Joanne Wuu; Adriano Chiò; Gabriella Restagno; Giuseppe Borghero; Mario Sabatelli; David Heckerman; Ekaterina Rogaeva; Lorne Zinman; Jeffrey D Rothstein; Michael Sendtner; Carsten Drepper; Evan E Eichler; Can Alkan; Ziedulla Abdullaev; Svetlana D Pack; Amalia Dutra; Evgenia Pak; John Hardy; Andrew Singleton; Nigel M Williams; Peter Heutink; Stuart Pickering-Brown; Huw R Morris; Pentti J Tienari; Bryan J Traynor
Journal:  Neuron       Date:  2011-09-21       Impact factor: 17.173

10.  DDX3X acts as a live-or-die checkpoint in stressed cells by regulating NLRP3 inflammasome.

Authors:  Parimal Samir; Sannula Kesavardhana; Deanna M Patmore; Sebastien Gingras; R K Subbarao Malireddi; Rajendra Karki; Clifford S Guy; Benoit Briard; David E Place; Anannya Bhattacharya; Bhesh Raj Sharma; Amanda Nourse; Sharon V King; Aaron Pitre; Amanda R Burton; Stephane Pelletier; Richard J Gilbertson; Thirumala-Devi Kanneganti
Journal:  Nature       Date:  2019-09-11       Impact factor: 69.504

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Journal:  Toxins (Basel)       Date:  2022-02-14       Impact factor: 4.546

Review 2.  Emerging Roles for Phase Separation of RNA-Binding Proteins in Cellular Pathology of ALS.

Authors:  Katarina Milicevic; Branislava Rankovic; Pavle R Andjus; Danijela Bataveljic; Dragomir Milovanovic
Journal:  Front Cell Dev Biol       Date:  2022-02-17
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