Literature DB >> 33798915

Rapid analysis of streaming platelet images by semi-unsupervised learning.

Ziji Zhang1, Peng Zhang2, Peineng Wang3, Jawaad Sheriff4, Danny Bluestein5, Yuefan Deng6.   

Abstract

We developed a fast and accurate deep learning approach employing a semi-unsupervised learning system (SULS) for capturing the real-time noisy, sparse, and ambiguous images of platelet activation. Outperforming several leading supervised learning methods when applied to segment various platelet morphologies, the SULS detects their complex boundaries at submicron resolutions and it massively decreases to only a few hours for segmenting streaming images of 45 million platelets that would have taken 40 years to annotate manually. For the first time, the fast dynamics of pseudopod formation and platelet morphological changes including membrane tethers and transient tethering to vessels are accurately captured. Published by Elsevier Ltd.

Entities:  

Keywords:  Deep learning; Medical imaging; Platelets; Segmentation

Mesh:

Year:  2021        PMID: 33798915      PMCID: PMC8612242          DOI: 10.1016/j.compmedimag.2021.101895

Source DB:  PubMed          Journal:  Comput Med Imaging Graph        ISSN: 0895-6111            Impact factor:   4.790


  29 in total

1.  Small sample learning of superpixel classifiers for EM segmentation.

Authors:  Toufiq Parag; Stephen Plaza; Louis Scheffer
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

2.  Heart Disease and Stroke Statistics-2019 Update: A Report From the American Heart Association.

Authors:  Emelia J Benjamin; Paul Muntner; Alvaro Alonso; Marcio S Bittencourt; Clifton W Callaway; April P Carson; Alanna M Chamberlain; Alexander R Chang; Susan Cheng; Sandeep R Das; Francesca N Delling; Luc Djousse; Mitchell S V Elkind; Jane F Ferguson; Myriam Fornage; Lori Chaffin Jordan; Sadiya S Khan; Brett M Kissela; Kristen L Knutson; Tak W Kwan; Daniel T Lackland; Tené T Lewis; Judith H Lichtman; Chris T Longenecker; Matthew Shane Loop; Pamela L Lutsey; Seth S Martin; Kunihiro Matsushita; Andrew E Moran; Michael E Mussolino; Martin O'Flaherty; Ambarish Pandey; Amanda M Perak; Wayne D Rosamond; Gregory A Roth; Uchechukwu K A Sampson; Gary M Satou; Emily B Schroeder; Svati H Shah; Nicole L Spartano; Andrew Stokes; David L Tirschwell; Connie W Tsao; Mintu P Turakhia; Lisa B VanWagner; John T Wilkins; Sally S Wong; Salim S Virani
Journal:  Circulation       Date:  2019-03-05       Impact factor: 29.690

3.  Studies of platelet and fibrinogen kinetics in patients with prosthetic heart valves.

Authors:  L A Harker; S J Slichter
Journal:  N Engl J Med       Date:  1970-12-10       Impact factor: 91.245

4.  The platelet pseudopodium and its involvement in aggregation and adhesion to vessel walls.

Authors:  B A Warren
Journal:  Br J Exp Pathol       Date:  1971-08

5.  Mechanics of transient platelet adhesion to von Willebrand factor under flow.

Authors:  Nipa A Mody; Oleg Lomakin; Teresa A Doggett; Thomas G Diacovo; Michael R King
Journal:  Biophys J       Date:  2004-11-08       Impact factor: 4.033

Review 6.  Not-so-supervised: A survey of semi-supervised, multi-instance, and transfer learning in medical image analysis.

Authors:  Veronika Cheplygina; Marleen de Bruijne; Josien P W Pluim
Journal:  Med Image Anal       Date:  2019-03-29       Impact factor: 8.545

7.  Multiple Atlas construction from a heterogeneous brain MR image collection.

Authors:  Yuchen Xie; Jeffrey Ho; Baba C Vemuri
Journal:  IEEE Trans Med Imaging       Date:  2013-01-14       Impact factor: 10.048

8.  Platelet adhesive dynamics. Part II: high shear-induced transient aggregation via GPIbalpha-vWF-GPIbalpha bridging.

Authors:  Nipa A Mody; Michael R King
Journal:  Biophys J       Date:  2008-05-30       Impact factor: 4.033

9.  Parameterizing the Morse Potential for Coarse-Grained Modeling of Blood Plasma.

Authors:  Na Zhang; Peng Zhang; Wei Kang; Danny Bluestein; Yuefan Deng
Journal:  J Comput Phys       Date:  2014-01-15       Impact factor: 3.553

10.  The cytoskeleton of the resting human blood platelet: structure of the membrane skeleton and its attachment to actin filaments.

Authors:  J H Hartwig; M DeSisto
Journal:  J Cell Biol       Date:  1991-02       Impact factor: 10.539

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  2 in total

1.  In Vitro Measurements of Shear-Mediated Platelet Adhesion Kinematics as Analyzed through Machine Learning.

Authors:  Jawaad Sheriff; Peineng Wang; Peng Zhang; Ziji Zhang; Yuefan Deng; Danny Bluestein
Journal:  Ann Biomed Eng       Date:  2021-05-10       Impact factor: 3.934

2.  Modeling of the thermal properties of SARS-CoV-2 S-protein.

Authors:  Ziyuan Niu; Karin Hasegawa; Yuefan Deng; Ziji Zhang; Miriam Rafailovich; Marcia Simon; Peng Zhang
Journal:  Front Mol Biosci       Date:  2022-09-27
  2 in total

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