Literature DB >> 25333142

Small sample learning of superpixel classifiers for EM segmentation.

Toufiq Parag, Stephen Plaza, Louis Scheffer.   

Abstract

Pixel and superpixel classifiers have become essential tools for EM segmentation algorithms. Training these classifiers remains a major bottleneck primarily due to the requirement of completely annotating the dataset which is tedious, error-prone and costly. In this paper, we propose an interactive learning scheme for the superpixel classifier for EM segmentation. Our algorithm is 'active semi-supervised' because it requests the labels of a small number of examples from user and applies label propagation technique to generate these queries. Using only a small set (< 20%) of all datapoints, the proposed algorithm consistently generates a classifier almost as accurate as that estimated from a complete groundtruth. We provide segmentation results on multiple datasets to show the strength of these classifiers.

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Year:  2014        PMID: 25333142     DOI: 10.1007/978-3-319-10404-1_49

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  3 in total

1.  A connectome of a learning and memory center in the adult Drosophila brain.

Authors:  Shin-Ya Takemura; Yoshinori Aso; Toshihide Hige; Allan Wong; Zhiyuan Lu; C Shan Xu; Patricia K Rivlin; Harald Hess; Ting Zhao; Toufiq Parag; Stuart Berg; Gary Huang; William Katz; Donald J Olbris; Stephen Plaza; Lowell Umayam; Roxanne Aniceto; Lei-Ann Chang; Shirley Lauchie; Omotara Ogundeyi; Christopher Ordish; Aya Shinomiya; Christopher Sigmund; Satoko Takemura; Julie Tran; Glenn C Turner; Gerald M Rubin; Louis K Scheffer
Journal:  Elife       Date:  2017-07-18       Impact factor: 8.140

2.  A context-aware delayed agglomeration framework for electron microscopy segmentation.

Authors:  Toufiq Parag; Anirban Chakraborty; Stephen Plaza; Louis Scheffer
Journal:  PLoS One       Date:  2015-05-27       Impact factor: 3.240

3.  Rapid analysis of streaming platelet images by semi-unsupervised learning.

Authors:  Ziji Zhang; Peng Zhang; Peineng Wang; Jawaad Sheriff; Danny Bluestein; Yuefan Deng
Journal:  Comput Med Imaging Graph       Date:  2021-03-11       Impact factor: 4.790

  3 in total

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