Literature DB >> 33788017

A theoretical study to the loliolide molecule and its isomers: a study by circular dichroism, QTAIM, and NMR theoretical methods.

Gunar Vingre da Silva Mota1, Fabio Luiz Paranhos Costa2.   

Abstract

The determination of an absolute configuration is a challenge in the structure elucidation of chiral natural products. With advancements in computational chemistry of chiroptical spectroscopy, the time-dependent density functional theory (TDDFT) calculation has emerged as a very promising tool. This paper attempts to illustrate the applicability of computational approaches in comparison with experimental data to understand the conformation, interaction, and stabilization of the loliolide's isomers. The quantum chemical calculations were used from optimized geometries of the (6R,7aS)-, (6S,7aR)-, (6R,7aR)-, and (6S,7aS)-6-hydroxy-4,4,7a-trimethyl-6,7-dihydro-5H-1-benzofuran-2-one. The spectroscopic values were obtained for 13C NMR isotropic shielding by GIAO method in mPW1PW91/cc-pVTZ level, in TDDFT at the ωB97X-D/cc-pVTZ level to the circular dichroism, and in theoretical analyses of non-covalent interaction to study the isomer's stability. The TDDFT calculation of circular dichroism can be used to quantify the individual isomers and the nature of excitation in the molecule. The (6R,7aS) and (6R,7aR) isomers present a higher stability due to electronegativity associated at the hydroxyl group.

Entities:  

Keywords:  Chemical shift; Electronic circular dichroism; Loliolide; Non-covalent interaction; QTAIM

Year:  2021        PMID: 33788017     DOI: 10.1007/s00894-021-04725-0

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  14 in total

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Journal:  J Am Chem Soc       Date:  2009-06-17       Impact factor: 15.419

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Journal:  Phys Chem Chem Phys       Date:  2012-07-31       Impact factor: 3.676

5.  Unraveling non-covalent interactions within flexible biomolecules: from electron density topology to gas phase spectroscopy.

Authors:  R Chaudret; B de Courcy; J Contreras-García; E Gloaguen; A Zehnacker-Rentien; M Mons; J-P Piquemal
Journal:  Phys Chem Chem Phys       Date:  2014-06-07       Impact factor: 3.676

6.  Loliolide from Salvia divinorum.

Authors:  L J Valdes
Journal:  J Nat Prod       Date:  1986 Jan-Feb       Impact factor: 4.050

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8.  Estimation of protein secondary structure from circular dichroism spectra: comparison of CONTIN, SELCON, and CDSSTR methods with an expanded reference set.

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Journal:  J Chem Inf Model       Date:  2019-10-28       Impact factor: 4.956

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