Literature DB >> 33784452

Early Strides in NMR Dynamics Measurements.

H Jane Dyson1.   

Abstract

The study of protein dynamics using the measurement of relaxation times by NMR was based on a set of studies in the mid-20th century that outlined theories and methods. However, the complexity of protein NMR was such that these simple experiments were not practical for application to proteins. The advent of techniques in the 1980s for isotopic labeling of proteins meant that pulse sequences could now be applied in multidimensional NMR experiments to enable per-residue information about the local relaxation times. One of the earliest advances was published in Biochemistry in 1989. The paper "Backbone dynamics of proteins as studied by 15N inverse detected heteronuclear NMR spectroscopy: application to staphylococcal nuclease" by Lewis Kay, Dennis Torchia, and Ad Bax delineated a set of pulse sequences that are used with minor modifications even today. This paper, with others from a limited number of other laboratories, forms the basis for the experimental determination of the backbone dynamics of proteins. The biological insights obtained from such measurements have only increased in the past 30 years. Sometimes, the best and perhaps only way to advance a field is an advancement in the technical capabilities that allows new perspectives to be reached.

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Year:  2021        PMID: 33784452      PMCID: PMC8865369          DOI: 10.1021/acs.biochem.1c00141

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  19 in total

1.  The dynamic energy landscape of dihydrofolate reductase catalysis.

Authors:  David D Boehr; Dan McElheny; H Jane Dyson; Peter E Wright
Journal:  Science       Date:  2006-09-15       Impact factor: 47.728

2.  Retinoic Acid Binding Leads to CRABP2 Rigidification and Dimerization.

Authors:  Carolina Lixa; Michael W Clarkson; Anwar Iqbal; Thomas M Moon; Fabio C L Almeida; Wolfgang Peti; Anderson S Pinheiro
Journal:  Biochemistry       Date:  2019-10-07       Impact factor: 3.162

3.  Conformational states of bovine pancreatic ribonuclease A observed by normal and partially relaxed carbon 13 nuclear magnetic resonance.

Authors:  V Glushko; P J Lawson; F R Gurd
Journal:  J Biol Chem       Date:  1972-05-25       Impact factor: 5.157

4.  Conformation and segmental motion of native and denatured ribonuclease A in solution. Application of natural-abundance carbon-13 partially relaxed Fourier transform nuclear magnetic resonance.

Authors:  A Allerhand; D Doddrell; V Glushko; D W Cochran; E Wenkert; P J Lawson; F R Gurd
Journal:  J Am Chem Soc       Date:  1971-01-27       Impact factor: 15.419

5.  Staphylococcal nuclease: sequential assignments and solution structure.

Authors:  D A Torchia; S W Sparks; A Bax
Journal:  Biochemistry       Date:  1989-06-27       Impact factor: 3.162

6.  The crystal structure of staphylococcal nuclease refined at 1.7 A resolution.

Authors:  T R Hynes; R O Fox
Journal:  Proteins       Date:  1991

7.  A transient helix in the disordered region of dynein light intermediate chain links the motor to structurally diverse adaptors for cargo transport.

Authors:  Ricardo Celestino; Morkos A Henen; José B Gama; Cátia Carvalho; Maxwell McCabe; Daniel J Barbosa; Alexandra Born; Parker J Nichols; Ana X Carvalho; Reto Gassmann; Beat Vögeli
Journal:  PLoS Biol       Date:  2019-01-07       Impact factor: 8.029

8.  Local unfolding of the HSP27 monomer regulates chaperone activity.

Authors:  T Reid Alderson; Julien Roche; Heidi Y Gastall; David M Dias; Iva Pritišanac; Jinfa Ying; Ad Bax; Justin L P Benesch; Andrew J Baldwin
Journal:  Nat Commun       Date:  2019-03-06       Impact factor: 14.919

9.  TDP-43 α-helical structure tunes liquid-liquid phase separation and function.

Authors:  Alexander E Conicella; Gregory L Dignon; Gül H Zerze; Hermann Broder Schmidt; Alexandra M D'Ordine; Young C Kim; Rajat Rohatgi; Yuna M Ayala; Jeetain Mittal; Nicolas L Fawzi
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-04       Impact factor: 11.205

10.  Adenoviral E1A Exploits Flexibility and Disorder to Target Cellular Proteins.

Authors:  Maria Grazia Murrali; Isabella C Felli; Roberta Pierattelli
Journal:  Biomolecules       Date:  2020-11-11
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