Literature DB >> 33780244

Dirigent Proteins Guide Asymmetric Heterocoupling for the Synthesis of Complex Natural Product Analogues.

Stacie S Kim1, Elizabeth S Sattely2.   

Abstract

Phenylpropanoids are a class of abundant building blocks found in plants and derived from phenylalanine and tyrosine. Phenylpropanoid polymerization leads to the second most abundant biopolymer lignin while stereo- and site-selective coupling generates an array of lignan natural products with potent biological activity, including the topoisomerase inhibitor and chemotherapeutic etoposide. A key step in etoposide biosynthesis involves a plant dirigent protein that promotes selective dimerization of coniferyl alcohol, a common phenylpropanoid, to form (+)-pinoresinol, a critical C2 symmetric pathway intermediate. Despite the power of this coupling reaction for the elegant and rapid assembly of the etoposide scaffold, dirigent proteins have not been utilized to generate other complex lignan natural products. Here, we demonstrate that dirigent proteins from Podophyllum hexandrum in combination with a laccase guide the heterocoupling of natural and synthetic coniferyl alcohol analogues for the enantioselective synthesis of pinoresinol analogues. This route for complexity generation is remarkably direct and efficient: three new bonds and four stereocenters are produced from two different achiral monomers in a single step. We anticipate our results will enable biocatalytic routes to difficult-to-access non-natural lignan analogues and etoposide derivatives. Furthermore, these dirigent protein and laccase-promoted reactions of coniferyl alcohol analogues represent new regio- and enantioselective oxidative heterocouplings for which no other chemical methods have been reported.

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Year:  2021        PMID: 33780244      PMCID: PMC8450019          DOI: 10.1021/jacs.0c13164

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   16.383


  40 in total

1.  Secoisolariciresinol dehydrogenase purification, cloning, and functional expression. Implications for human health protection.

Authors:  Z Q Xia; M A Costa; H C Pelissier; L B Davin; N G Lewis
Journal:  J Biol Chem       Date:  2001-01-18       Impact factor: 5.157

2.  Biosynthesis and constitution of lignin.

Authors:  K FREUDENBERG
Journal:  Nature       Date:  1959-04-25       Impact factor: 49.962

3.  Expression in Pichia pastoris and characterization of two novel dirigent proteins for atropselective formation of gossypol.

Authors:  Isabelle Effenberger; Michael Harport; Jens Pfannstiel; Iris Klaiber; Andreas Schaller
Journal:  Appl Microbiol Biotechnol       Date:  2016-11-17       Impact factor: 4.813

4.  SignalP 5.0 improves signal peptide predictions using deep neural networks.

Authors:  José Juan Almagro Armenteros; Konstantinos D Tsirigos; Casper Kaae Sønderby; Thomas Nordahl Petersen; Ole Winther; Søren Brunak; Gunnar von Heijne; Henrik Nielsen
Journal:  Nat Biotechnol       Date:  2019-02-18       Impact factor: 54.908

Review 5.  An update on bioactive plant lignans.

Authors:  Muhammad Saleem; Hyoung Ja Kim; Muhammad Shaiq Ali; Yong Sup Lee
Journal:  Nat Prod Rep       Date:  2005-11-02       Impact factor: 13.423

6.  (+)-Pinoresinol/(+)-lariciresinol reductase from Forsythia intermedia. Protein purification, cDNA cloning, heterologous expression and comparison to isoflavone reductase.

Authors:  A T Dinkova-Kostova; D R Gang; L B Davin; D L Bedgar; A Chu; N G Lewis
Journal:  J Biol Chem       Date:  1996-11-15       Impact factor: 5.157

Review 7.  Lignin biosynthesis.

Authors:  Wout Boerjan; John Ralph; Marie Baucher
Journal:  Annu Rev Plant Biol       Date:  2003       Impact factor: 26.379

8.  Stereospecificity of (+)-pinoresinol and (+)-lariciresinol reductases from Forsythia intermedia.

Authors:  A Chu; A Dinkova; L B Davin; D L Bedgar; N G Lewis
Journal:  J Biol Chem       Date:  1993-12-25       Impact factor: 5.157

9.  Etoposide quinone is a covalent poison of human topoisomerase IIβ.

Authors:  Nicholas A Smith; Jo Ann W Byl; Susan L Mercer; Joseph E Deweese; Neil Osheroff
Journal:  Biochemistry       Date:  2014-05-02       Impact factor: 3.162

10.  The dirigent multigene family in Isatis indigotica: gene discovery and differential transcript abundance.

Authors:  Qing Li; Junfeng Chen; Ying Xiao; Peng Di; Lei Zhang; Wansheng Chen
Journal:  BMC Genomics       Date:  2014-05-20       Impact factor: 3.969

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  5 in total

Review 1.  Laccase-mediated synthesis of bioactive natural products and their analogues.

Authors:  Nunzio Cardullo; Vera Muccilli; Corrado Tringali
Journal:  RSC Chem Biol       Date:  2022-04-18

2.  Uniform binding and negative catalysis at the origin of enzymes.

Authors:  Elad Noor; Avi I Flamholz; Vijay Jayaraman; Brian L Ross; Yair Cohen; Wayne M Patrick; Ita Gruic-Sovulj; Dan S Tawfik
Journal:  Protein Sci       Date:  2022-08       Impact factor: 6.993

3.  Investigation of dirigent like domains from bacterial genomes.

Authors:  Merlin Bardin; Pierre Rousselot-Pailley; Thierry Tron; Viviane Robert
Journal:  BMC Bioinformatics       Date:  2022-08-02       Impact factor: 3.307

4.  The Crystal Structure of the Defense Conferring Rice Protein OsJAC1 Reveals a Carbohydrate Binding Site on the Dirigent-like Domain.

Authors:  Nikolai Huwa; Oliver H Weiergräber; Alexander V Fejzagić; Christian Kirsch; Ulrich Schaffrath; Thomas Classen
Journal:  Biomolecules       Date:  2022-08-17

Review 5.  Demystifying racemic natural products in the homochiral world.

Authors:  Gabin Thierry M Bitchagno; Vaderament-A Nchiozem-Ngnitedem; Dennis Melchert; Serge Alain Fobofou
Journal:  Nat Rev Chem       Date:  2022-10-14       Impact factor: 34.571

  5 in total

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