Literature DB >> 33774266

The shifting shape of genomes: dynamics of heterochromatin interactions at the nuclear lamina.

Victoria E Hoskins1, Kristiana Smith1, Karen L Reddy2.   

Abstract

The nucleus is a highly structured organelle with many chromatin and protein compartments that partition the genome into regulatory domains. One such a compartment within the mammalian nucleus is the microenvironment underlying the nuclear envelope (NE) where intermediate filament proteins, lamins, act as a link between cytoskeletal and inner nuclear membrane (INM) proteins, chromatin binders and modifiers, and heterochromatin. These dynamic interactions regulate many cellular processes and, when they are perturbed, can lead to genome dysregulation and disease.
Copyright © 2021 Elsevier Ltd. All rights reserved.

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Year:  2021        PMID: 33774266      PMCID: PMC8489734          DOI: 10.1016/j.gde.2021.02.003

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  79 in total

1.  Step-wise methylation of histone H3K9 positions heterochromatin at the nuclear periphery.

Authors:  Benjamin D Towbin; Cristina González-Aguilera; Ragna Sack; Dimos Gaidatzis; Véronique Kalck; Peter Meister; Peter Askjaer; Susan M Gasser
Journal:  Cell       Date:  2012-08-31       Impact factor: 41.582

Review 2.  DamID: mapping of in vivo protein-genome interactions using tethered DNA adenine methyltransferase.

Authors:  Frauke Greil; Celine Moorman; Bas van Steensel
Journal:  Methods Enzymol       Date:  2006       Impact factor: 1.600

3.  A Lamina-Associated Domain Border Governs Nuclear Lamina Interactions, Transcription, and Recombination of the Tcrb Locus.

Authors:  Shiwei Chen; Teresa Romeo Luperchio; Xianrong Wong; Europe B Doan; Aaron T Byrd; Kingshuk Roy Choudhury; Karen L Reddy; Michael S Krangel
Journal:  Cell Rep       Date:  2018-11-13       Impact factor: 9.423

Review 4.  Partners and post-translational modifications of nuclear lamins.

Authors:  Dan N Simon; Katherine L Wilson
Journal:  Chromosoma       Date:  2013-03-12       Impact factor: 4.316

5.  Alterations in mitosis and cell cycle progression caused by a mutant lamin A known to accelerate human aging.

Authors:  Thomas Dechat; Takeshi Shimi; Stephen A Adam; Antonio E Rusinol; Douglas A Andres; H Peter Spielmann; Michael S Sinensky; Robert D Goldman
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-14       Impact factor: 11.205

6.  Structural organization of nuclear lamins A, C, B1, and B2 revealed by superresolution microscopy.

Authors:  Takeshi Shimi; Mark Kittisopikul; Joseph Tran; Anne E Goldman; Stephen A Adam; Yixian Zheng; Khuloud Jaqaman; Robert D Goldman
Journal:  Mol Biol Cell       Date:  2015-08-26       Impact factor: 4.138

7.  Promoter-Intrinsic and Local Chromatin Features Determine Gene Repression in LADs.

Authors:  Christ Leemans; Marloes C H van der Zwalm; Laura Brueckner; Federico Comoglio; Tom van Schaik; Ludo Pagie; Joris van Arensbergen; Bas van Steensel
Journal:  Cell       Date:  2019-04-11       Impact factor: 41.582

8.  Chromatin structure dynamics during the mitosis-to-G1 phase transition.

Authors:  Haoyue Zhang; Daniel J Emerson; Thomas G Gilgenast; Katelyn R Titus; Yemin Lan; Peng Huang; Di Zhang; Hongxin Wang; Cheryl A Keller; Belinda Giardine; Ross C Hardison; Jennifer E Phillips-Cremins; Gerd A Blobel
Journal:  Nature       Date:  2019-11-27       Impact factor: 49.962

9.  The PRR14 heterochromatin tether encodes modular domains that mediate and regulate nuclear lamina targeting.

Authors:  Kelly L Dunlevy; Valentina Medvedeva; Jade E Wilson; Mohammed Hoque; Trinity Pellegrin; Adam Maynard; Madison M Kremp; Jason S Wasserman; Andrey Poleshko; Richard A Katz
Journal:  J Cell Sci       Date:  2020-05-27       Impact factor: 5.285

10.  Lamin B1 mapping reveals the existence of dynamic and functional euchromatin lamin B1 domains.

Authors:  Laura Pascual-Reguant; Enrique Blanco; Silvia Galan; François Le Dily; Yasmina Cuartero; Gemma Serra-Bardenys; Valerio Di Carlo; Ane Iturbide; Joan Pau Cebrià-Costa; Lara Nonell; Antonio García de Herreros; Luciano Di Croce; Marc A Marti-Renom; Sandra Peiró
Journal:  Nat Commun       Date:  2018-08-24       Impact factor: 14.919

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  8 in total

Review 1.  New insights into genome folding by loop extrusion from inducible degron technologies.

Authors:  Elzo de Wit; Elphège P Nora
Journal:  Nat Rev Genet       Date:  2022-09-30       Impact factor: 59.581

2.  Nuclear position modulates long-range chromatin interactions.

Authors:  Elizabeth H Finn; Tom Misteli
Journal:  PLoS Genet       Date:  2022-10-07       Impact factor: 6.020

Review 3.  Establishment of H3K9-methylated heterochromatin and its functions in tissue differentiation and maintenance.

Authors:  Jan Padeken; Stephen P Methot; Susan M Gasser
Journal:  Nat Rev Mol Cell Biol       Date:  2022-05-13       Impact factor: 113.915

4.  Concordance of hydrogen peroxide-induced 8-oxo-guanine patterns with two cancer mutation signatures of upper GI tract tumors.

Authors:  Seung-Gi Jin; Yingying Meng; Jennifer Johnson; Piroska E Szabó; Gerd P Pfeifer
Journal:  Sci Adv       Date:  2022-06-03       Impact factor: 14.957

5.  Epigenetic regulation of nuclear lamina-associated heterochromatin by HAT1 and the acetylation of newly synthesized histones.

Authors:  Liudmila V Popova; Prabakaran Nagarajan; Callie M Lovejoy; Benjamin D Sunkel; Miranda L Gardner; Meng Wang; Michael A Freitas; Benjamin Z Stanton; Mark R Parthun
Journal:  Nucleic Acids Res       Date:  2021-12-02       Impact factor: 16.971

6.  Chromosome length and gene density contribute to micronuclear membrane stability.

Authors:  Anna E Mammel; Heather Z Huang; Amanda L Gunn; Emma Choo; Emily M Hatch
Journal:  Life Sci Alliance       Date:  2021-11-17

Review 7.  Nuclear Dynamics and Chromatin Structure: Implications for Pancreatic Cancer.

Authors:  Luis F Flores; Brooke R Tader; Ezequiel J Tolosa; Ashley N Sigafoos; David L Marks; Martin E Fernandez-Zapico
Journal:  Cells       Date:  2021-10-01       Impact factor: 6.600

8.  Mechanisms of A-Type Lamin Targeting to Nuclear Ruptures Are Disrupted in LMNA- and BANF1-Associated Progerias.

Authors:  Rhiannon M Sears; Kyle J Roux
Journal:  Cells       Date:  2022-03-02       Impact factor: 6.600

  8 in total

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