Literature DB >> 33767729

ceRNA Network Analysis Shows That lncRNA CRNDE Promotes Progression of Glioblastoma Through Sponge mir-9-5p.

Xiaobin Luo1, Tianqi Tu1, Yali Zhong2, Shangyi Xu1, Xiangzhou Chen1, Ligang Chen1,3,4,5, Fubing Yang1,3,4.   

Abstract

Glioblastoma accounts for 45.2% of central nervous system tumors. Despite the availability of multiple treatments (e.g., surgery, radiotherapy, chemotherapy, biological therapy, immunotherapy, and electric field therapy), glioblastoma has a poor prognosis, with a 5-year survival rate of approximately 5%. The pathogenesis and prognostic markers of this cancer are currently unclear. To this end, this study aimed to explore the pathogenesis of glioblastoma and identify potential prognostic markers. We used data from the GEO and TCGA databases and identified five genes (ITGA5, MMP9, PTPRN, PTX3, and STX1A) that could affect the survival rate of glioblastoma patients and that were differentially expressed between glioblastoma patients and non-tumors groups. Based on a variety of bioinformatics tools for reverse prediction of target genes associated with the prognosis of GBM, a ceRNA network of messenger RNA (STX1A, PTX3, MMP9)-microRNA (miR-9-5p)-long non-coding RNA (CRNDE) was constructed. Finally, we identified five potential therapeutic drugs (bacitracin, hecogenin, clemizole, chrysin, and gibberellic acid) that may be effective treatments for glioblastoma.
Copyright © 2021 Luo, Tu, Zhong, Xu, Chen, Chen and Yang.

Entities:  

Keywords:  CRNDE; bioinformatics analysis; competing endogenous RNA; glioblastoma; mRNA-miRNA-lncRNA; therapeutic targets

Year:  2021        PMID: 33767729      PMCID: PMC7985093          DOI: 10.3389/fgene.2021.617350

Source DB:  PubMed          Journal:  Front Genet        ISSN: 1664-8021            Impact factor:   4.599


  6 in total

Review 1.  The function of LncRNA-ATB in cancer.

Authors:  Amir Anbiyaiee; Mohammad Ramazii; Siamak Soltani Bajestani; Seyed Mohammadmahdi Meybodi; Mona Keivan; Seyed Esmaeil Khoshnam; Maryam Farzaneh
Journal:  Clin Transl Oncol       Date:  2022-05-21       Impact factor: 3.405

2.  LncRNA CRNDE promotes cell proliferation, migration and invasion of ovarian cancer via miR-423-5p/FSCN1 axis.

Authors:  Qiong Wang; Ling-Xiong Wang; Chun-Yan Zhang; Nan Bai; Chen Feng; Zhuo-Mei Zhang; Liang Wang; Zhen-Zhen Gao
Journal:  Mol Cell Biochem       Date:  2022-02-15       Impact factor: 3.396

Review 3.  Long Non-coding RNA HOTAIR in Central Nervous System Disorders: New Insights in Pathogenesis, Diagnosis, and Therapeutic Potential.

Authors:  Jialu Wang; Jiuhan Zhao; Pan Hu; Lianbo Gao; Shen Tian; Zhenwei He
Journal:  Front Mol Neurosci       Date:  2022-06-23       Impact factor: 6.261

4.  Na+/H+-Exchanger Family as Novel Prognostic Biomarkers in Colorectal Cancer.

Authors:  Xin Zhou; Manman Jiang; Zhihong Liu; Mengmeng Xu; Nannan Chen; Ziyu Wu; Changji Gu; Eugene Chin; Xiaodong Yang
Journal:  J Oncol       Date:  2021-11-01       Impact factor: 4.375

5.  Regulatory network of miRNA, lncRNA, transcription factor and target immune response genes in bovine mastitis.

Authors:  Ashley R Tucker; Nicole A Salazar; Adeola O Ayoola; Erdoğan Memili; Bolaji N Thomas; Olanrewaju B Morenikeji
Journal:  Sci Rep       Date:  2021-11-09       Impact factor: 4.379

6.  Quantitative Expression of SFN, lncRNA CCDC18-AS1, and lncRNA LINC01343 in Human Breast Cancer as the Regulator Biomarkers in a Novel ceRNA Network: Based on Bioinformatics and Experimental Analyses.

Authors:  Mehrnoush Rishehri; Tahereh Etemadi; Leila Pisheh; Ghazaleh Koufigar; Mansoureh Azadeh
Journal:  Genet Res (Camb)       Date:  2022-09-12       Impact factor: 1.375

  6 in total

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