Literature DB >> 33767716

Common Vetch, Valuable Germplasm for Resilient Agriculture: Genetic Characterization and Spanish Core Collection Development.

Lucía De la Rosa1, María Isabel López-Román2, Juan M González3, Encarnación Zambrana1, Teresa Marcos-Prado1, Elena Ramírez-Parra2.   

Abstract

Common vetch (Vicia sativa L.) is a legume used for animal feed because of its high protein content and great capacity for nitrogen fixation, making this crop relevant in sustainable agriculture. The Spanish vetch collection, conserved at the Spanish Plant Genetic Resources Center (CRF), is one of the largest collections of this species worldwide, including landraces, wild relatives mainly collected in Spain, and commercial cultivars, but also accessions of international origin. The analysis of the genetic diversity of this material, whose genome has not been sequenced yet, and the assembly of a representative collection could play a pivotal role in conserving and exploiting these genetic resources in breeding programs mainly in those focused on consequences and demands of climate change. In this work, a set of 14 simple sequence repeat (SSR) reference alleles for genetic diversity analysis of the CRF vetch collection has been developed, used for genotyping more than 545 common vetch accessions from all over the world and validated. All the tested markers were polymorphic for the analyzed accessions. Overall, at least 86 different loci were identified with 2-11 alleles per locus with an average of 6.1 alleles per locus. Also, the analyses of the generated SSR database support that most of these SSR markers are transferable across closely related species of Vicia genus. Analysis of molecular variance revealed that wild relatives have a higher genetic diversity than landraces. However, cultivars have similar diversity than landraces, indicating that genetic variability has been barely lost due to the breeding of this legume. Low differences of genetic variations between Spanish and non-Spanish accessions have been observed, suggesting a high degree of diversity within Spanish genotypes, which provide 95% of the total genetic variation, so we have focused our efforts on characterizing genotypes of Spanish origin that were further studied using storage protein profiles. Based on SSR, seed protein profiles, and agromorphological and passport data, a vetch core collection (VCC) containing 47 V. sativa accessions of Spanish origin has been established. In this collection, the characterization has been expanded using ISSR markers, and it has been reevaluated with new agromorphological data, including drought tolerance characters. This VCC presents a minimum loss of genetic diversity concerning the total collection and constitutes an invaluable material that can be used in future breeding programs for direct use in a resilient agricultural system.
Copyright © 2021 De la Rosa, López-Román, González, Zambrana, Marcos-Prado and Ramírez-Parra.

Entities:  

Keywords:  Plant Genetic Resources; Vicia sativa; common vetch; core collection; genebank; genetic diversity; legume

Year:  2021        PMID: 33767716      PMCID: PMC7985455          DOI: 10.3389/fpls.2021.617873

Source DB:  PubMed          Journal:  Front Plant Sci        ISSN: 1664-462X            Impact factor:   5.753


  3 in total

Review 1.  The INCREASE project: Intelligent Collections of food-legume genetic resources for European agrofood systems.

Authors:  Elisa Bellucci; Orlando Mario Aguilar; Saleh Alseekh; Kirstin Bett; Creola Brezeanu; Douglas Cook; Lucía De la Rosa; Massimo Delledonne; Denise F Dostatny; Juan J Ferreira; Valérie Geffroy; Sofia Ghitarrini; Magdalena Kroc; Shiv Kumar Agrawal; Giuseppina Logozzo; Mario Marino; Tristan Mary-Huard; Phil McClean; Vladimir Meglič; Tamara Messer; Frédéric Muel; Laura Nanni; Kerstin Neumann; Filippo Servalli; Silvia Străjeru; Rajeev K Varshney; Marta W Vasconcelos; Massimo Zaccardelli; Aleksei Zavarzin; Elena Bitocchi; Emanuele Frontoni; Alisdair R Fernie; Tania Gioia; Andreas Graner; Luis Guasch; Lena Prochnow; Markus Oppermann; Karolina Susek; Maud Tenaillon; Roberto Papa
Journal:  Plant J       Date:  2021-09-23       Impact factor: 7.091

2.  Genome survey sequencing of common vetch (Vicia sativa L.) and genetic diversity analysis of Chinese germplasm with genomic SSR markers.

Authors:  Lin Ma; Xiao Wang; Min Yan; Fang Liu; Shuxing Zhang; Xuemin Wang
Journal:  Mol Biol Rep       Date:  2021-11-06       Impact factor: 2.316

Review 3.  Progress of Genomics-Driven Approaches for Sustaining Underutilized Legume Crops in the Post-Genomic Era.

Authors:  Uday Chand Jha; Harsh Nayyar; Swarup K Parida; Melike Bakır; Eric J B von Wettberg; Kadambot H M Siddique
Journal:  Front Genet       Date:  2022-04-07       Impact factor: 4.772

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.