Literature DB >> 33767596

Novel biomarkers for post-contrast acute kidney injury identified from long non-coding RNA expression profiles.

Guanzhong Chen1,2, Bowen Liu1,2, Shiqun Chen1,2, Huanqiang Li1, Jin Liu1, Ziling Mai1,2, Enzhao Chen1, Chunyun Zhou1, Guoli Sun1,2, Zhaodong Guo1, Li Lei1,3, Shanyi Huang1, Liyao Zhang1, Min Li1, Ning Tan1,2,3, Hong Li4, Yulin Liao5, Jia Liu6, Jiyan Chen1,2,3, Yong Liu1,2,3.   

Abstract

Background: Post-contrast acute kidney injury (PC-AKI) is a severe complication of cardiac catheterization. Emerging evidence indicated that long non-coding RNAs (lncRNAs) could serve as biomarkers for various diseases. However, the lncRNA expression profile and potential biomarkers in PC-AKI remain unclear. This study aimed to investigate novel lncRNA biomarkers for the early detection of PC-AKI.
Methods: lncRNA profile in the kidney tissues of PC-AKI rats was evaluated through RNA sequencing. Potential lncRNA biomarkers were identified through human-rat homology analysis, kidney and blood filtering in rats and verified in 112 clinical samples. The expression patterns of the candidate lncRNAs were detected in HK-2 cells and rat models to evaluate their potential for early detection.
Results: In total, 357 lncRNAs were found to be differentially expressed in PC-AKI. We identified lnc-HILPDA and lnc-PRND were conservative and remarkably upregulated in both kidneys and blood from rats and the blood of PC-AKI patients; these lncRNAs can precisely distinguish PC-AKI patients (area under the curve (AUC) values of 0.885 and 0.875, respectively). The combination of these two lncRNAs exhibited improved accuracy for predicting PC-AKI, with 100% sensitivity and 83.93% specificity. Time-course experiments showed that the significant difference was first noted in the blood of PC-AKI rats at 12 h for lnc-HILPDA and 24 h for lnc-PRND.
Conclusion: Our study revealed that lnc-HILPDA and lnc-PRND may serve as the novel biomarkers for early detection and profoundly affect the clinical stratification and strategy guidance of PC-AKI. © The author(s).

Entities:  

Keywords:  bioinformatics; biomarker; long non-coding RNA; post-contrast acute kidney injury

Mesh:

Substances:

Year:  2021        PMID: 33767596      PMCID: PMC7975710          DOI: 10.7150/ijbs.45294

Source DB:  PubMed          Journal:  Int J Biol Sci        ISSN: 1449-2288            Impact factor:   6.580


  44 in total

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  1 in total

Review 1.  An Update of Long-Noncoding RNAs in Acute Kidney Injury.

Authors:  Lina Yang; Bo Wang; Liang Ma; Ping Fu
Journal:  Front Physiol       Date:  2022-03-08       Impact factor: 4.566

  1 in total

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