| Literature DB >> 33765220 |
Sabrina Di Masi1, Giuseppe E De Benedetto2,3, Cosimino Malitesta4,5, Maria Saponari6, Cinzia Citti7,8, Giuseppe Cannazza7,8, Giuseppe Ciccarella9,10,11.
Abstract
Olive quick decline syndrome (OQDS) is a disorder associated with bacterial infections caused by Xylella fastidiosa subsp. pauca ST53 in olive trees. Metabolic profile changes occurring in infected olive trees are still poorly investigated, but have the potential to unravel reliable biomarkers to be exploited for early diagnosis of infections. In this study, an untargeted metabolomic method using high-performance liquid chromatography coupled to quadrupole-time-of-flight high-resolution mass spectrometry (HPLC-ESI-Q-TOF-MS) was used to detect differences in samples (leaves) from healthy (Ctrl) and infected (Xf) olive trees. Both unsupervised and supervised data analysis clearly differentiated the groups. Different metabolites have been identified as potential specific biomarkers, and their characterization strongly suggests that metabolism of flavonoids and long-chain fatty acids is perturbed in Xf samples. In particular, a decrease in the defence capabilities of the host after Xf infection is proposed because of a significant dysregulation of some metabolites belonging to flavonoid family. Moreover, oleic acid is confirmed as a putative diffusible signal factor (DSF). This study provides new insights into the host-pathogen interactions and confirms LC-HRMS-based metabolomics as a powerful approach for disease-associated biomarkers discovery in plants.Entities:
Keywords: High-resolution mass spectrometry; Liquid chromatography; Metabolomics; Olive quick decline syndrome
Mesh:
Year: 2021 PMID: 33765220 PMCID: PMC8748322 DOI: 10.1007/s00216-021-03279-7
Source DB: PubMed Journal: Anal Bioanal Chem ISSN: 1618-2642 Impact factor: 4.142
Fig. 1XCMS Cloud plot representation of the dysregulated metabolite features for ESI-MS (a) positive ion mode and (b) negative ion mode: green bubbles represent the up-regulated features whereas the red ones represent the down-regulated features. Bubble diameter is proportional to fold change
Fig. 2Score plot of principal component analysis (PCA) on metabolomic data acquired in ESI-MS (a) positive ion mode and (b) negative ion mode
Sample partition in Ctrl (healthy olive trees) and Xf (infected ones) classes, as well as in training and test sets
| Ctrl (healthy olive trees) | Xf (infected olive trees) | Total | |
|---|---|---|---|
| Training set | 14 | 8 | 22 |
| Test set | 3 | 2 | 5 |
| Total | 17 | 10 | 27 |
PLS-DA and OPLS-DA models component description and predictive performances
| Component | R2X | R2X (cum) | Eigenvalue | R2Y | R2Y(cum) | Q2 | Q2 (cum) | |
|---|---|---|---|---|---|---|---|---|
| PLS-DA (ESI-MS data, positive ion mode) | 1 | 0.629 | 0.629 | 13.8 | 0.859 | 0.859 | 0.844 | 0.844 |
| 2 | 0.0609 | 0.69 | 1.34 | 0.127 | 0.986 | 0.464 | 0.916 | |
| PLS-DA (ESI-MS data, negative ion mode) | 1 | 0.601 | 0.601 | 13.2 | 0.83 | 0.83 | 0.814 | 0.814 |
| 2 | 0.0593 | 0.66 | 1.31 | 0.145 | 0.975 | 0.526 | 0.912 | |
| OPLS-DA (ESI-MS data, positive ion mode) | P1 (Predictive) | 0.542 | 0.542 | 11.9 | 0.986 | 0.986 | 0.917 | 0.917 |
| O1 (Orthogonal in X) | 0.149 | 0.149 | 3.27 | |||||
| OPLS-DA (ESI-MS data, negative ion mode) | P1 (Predictive) | 0.504 | 0.504 | 11.1 | 0.975 | 0.975 | 0.874 | 0.874 |
| O1 (Orthogonal in X) | 0.156 | 0.156 | 3.44 |
Fig. 3Scatter plots for the predicted scores of the two components retained in the PLS-DA and OPLS-DA models calculated for both ESI-MS ion modes: (a) PLS-DA, ESI-MS, + ion mode; (b) PLS-DA, ESI-MS, − ion mode; (c) OPLS-DA, ESI-MS, + ion mode; and (d) OPLS-DA, ESI-MS, − ion mode. Healthy (Ctrl) and Xf-infected samples (Xf) belonging to the training set are coloured in green and in red, respectively, whereas all the test samples are in blue. Variables were filtered according to p value <0.01 and fold change > 1.5 for both ESI modes
Significant metabolites identified in healthy (control) and Xf samples whose dysregulation between not-infected and infected plant samples is discussed in the text. For each recognized metabolite, along with electrospray mode, formula, exact mass, and retention time, the values explaining the differences are reported: fold change, p value and dysregulation trend. These metabolites have been confirmed by MS/MS experiments (ESM Fig. S1)
| Metabolite | ESI-MS ion mode | Formula | RT (min) | Fold change | p value | Change trend | |
|---|---|---|---|---|---|---|---|
| Pyridoxine | + | C8H11NO3 | 170.0804 | 1.1 | 8.4 | 1.23E-06 | UP |
| β-Ionone | + | C13H20O | 193.1577 | 11.42 | 30.2 | 2.17E-08 | UP |
| Taxifolin | – | C15H12O7 | 303.0485 | 12.13 | 6.7 | 1.82E-06 | DOWN |
| Kaempferol | – | C15H10O6 | 285.0376 | 12.14 | 5.6 | 3.69E-06 | DOWN |
| Solavetivone | + | C15H22O | 219.1663 | 13.19 | 12.6 | 4.35E-12 | UP |
| Diosmin | – | C28H32O15 | 607.1614 | 13.88 | 2.0 | 1.11E-03 | DOWN |
| Diosmetin 7-O-beta-D-glucopyranoside | – | C22H22O11 | 461.0673 | 13.88 | 5.3 | 6.43E-10 | DOWN |
| Jasmonic acid | – | C12H18O3 | 209.1180 | 15.26 | 8.2 | 1.22E-07 | UP |
| (S)-Abscisic acid | – | C15H20O4 | 263.1264 | 15.67 | 3.3 | 9.05E-09 | UP |
| Ligstroside | – | C25H32O12 | 523.1752 | 16.09 | 1.9 | 3.96E-03 | DOWN |
| Luteolin | – | C15H10O6 | 285.0376 | 12.14 | 5.6 | 3.69E-07 | DOWN |
| Sinapic acid | + | C11H14O5 | 225.075 | 20.35 | 3.4 | 3.00E-04 | DOWN |
| Maslinic acid | – | C30H48O4 | 471.3472 | 30.50 | 3.3 | 2.72E-09 | UP |
| 12-HETE | – | C20H32O3 | 319.2298 | 32.30 | 5.0 | 3.00E-05 | DOWN |
| Palmitic acid | – | C16H32O2 | 255.2330 | 36.52 | 10.5 | 3.00E-05 | UP |
| Heptadecanoic acid | – | C17H34O2 | 269.2489 | 36.86 | 7.9 | 4.05E-06 | UP |
| Oleic acid | – | C18H34O2 | 281.2504 | 37.76 | 6.0 | 5.00E-05 | UP |
| Stearic acid | – | C18H36O2 | 283.2670 | 51.87 | 1.6 | 6.00E-04 | UP |
Fig. 4Comparison of extracted ion chromatogram (EIC) of some fatty acid metabolites in ESI-MS (negative ion mode) between Ctrl and Xf-infected samples