Literature DB >> 33765078

Artificial neural networks versus LASSO regression for the prediction of long-term survival after surgery for invasive IPMN of the pancreas.

Linus Aronsson1, Roland Andersson1, Daniel Ansari1.   

Abstract

Prediction of long-term survival in patients with invasive intraductal papillary mucinous neoplasm (IPMN) of the pancreas may aid in patient assessment, risk stratification and personalization of treatment. This study aimed to investigate the predictive ability of artificial neural networks (ANN) and LASSO regression in terms of 5-year disease-specific survival. ANN work in a non-linear fashion, having a potential advantage in analysis of variables with complex correlations compared to regression models. LASSO is a type of regression analysis facilitating variable selection and regularization. A total of 440 patients undergoing surgical treatment for invasive IPMN of the pancreas registered in the Surveillance, Epidemiology and End Results (SEER) database between 2004 and 2016 were analyzed. The dataset was prior to analysis randomly split into a modelling and test set (7:3). The accuracy, precision and F1 score for predicting mortality were 0.82, 0.83 and 0.89, respectively for ANN with variable selection compared to 0.79, 0.85 and 0.87, respectively for the LASSO-model. ANN using all variables showed similar accuracy, precision and F1 score of 0.81, 0.85 and 0.88, respectively compared to a logistic regression analysis. McNemar´s test showed no statistical difference between the models. The models showed high and similar performance with regard to accuracy and precision for predicting 5-year survival status.

Entities:  

Year:  2021        PMID: 33765078      PMCID: PMC7993879          DOI: 10.1371/journal.pone.0249206

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  21 in total

1.  Pathologic Evaluation and Reporting of Intraductal Papillary Mucinous Neoplasms of the Pancreas and Other Tumoral Intraepithelial Neoplasms of Pancreatobiliary Tract: Recommendations of Verona Consensus Meeting.

Authors:  Volkan Adsay; Mari Mino-Kenudson; Toru Furukawa; Olca Basturk; Giuseppe Zamboni; Giovanni Marchegiani; Claudio Bassi; Roberto Salvia; Giuseppe Malleo; Salvatore Paiella; Christopher L Wolfgang; Hanno Matthaei; G Johan Offerhaus; Mustapha Adham; Marco J Bruno; Michelle D Reid; Alyssa Krasinskas; Günter Klöppel; Nobuyuki Ohike; Takuma Tajiri; Kee-Taek Jang; Juan Carlos Roa; Peter Allen; Carlos Fernández-del Castillo; Jin-Young Jang; David S Klimstra; Ralph H Hruban
Journal:  Ann Surg       Date:  2016-01       Impact factor: 12.969

Review 2.  Revisions of international consensus Fukuoka guidelines for the management of IPMN of the pancreas.

Authors:  Masao Tanaka; Carlos Fernández-Del Castillo; Terumi Kamisawa; Jin Young Jang; Philippe Levy; Takao Ohtsuka; Roberto Salvia; Yasuhiro Shimizu; Minoru Tada; Christopher L Wolfgang
Journal:  Pancreatology       Date:  2017-07-13       Impact factor: 3.996

3.  Design and Application of a Variable Selection Method for Multilayer Perceptron Neural Network With LASSO.

Authors:  Kai Sun; Shao-Hsuan Huang; David Shan-Hill Wong; Shi-Shang Jang
Journal:  IEEE Trans Neural Netw Learn Syst       Date:  2016-03-30       Impact factor: 10.451

4.  Invasive intraductal papillary mucinous neoplasm versus sporadic pancreatic adenocarcinoma: a stage-matched comparison of outcomes.

Authors:  Nabil Wasif; David J Bentrem; James J Farrell; Clifford Y Ko; Oscar J Hines; Howard A Reber; James S Tomlinson
Journal:  Cancer       Date:  2010-07-15       Impact factor: 6.860

5.  Deep Learning to Classify Intraductal Papillary Mucinous Neoplasms Using Magnetic Resonance Imaging.

Authors:  Juan E Corral; Sarfaraz Hussein; Pujan Kandel; Candice W Bolan; Ulas Bagci; Michael B Wallace
Journal:  Pancreas       Date:  2019-07       Impact factor: 3.327

6.  Regularization Paths for Generalized Linear Models via Coordinate Descent.

Authors:  Jerome Friedman; Trevor Hastie; Rob Tibshirani
Journal:  J Stat Softw       Date:  2010       Impact factor: 6.440

7.  Intraductal papillary mucinous carcinoma versus pancreatic ductal adenocarcinoma: A systematic review and meta-analysis.

Authors:  Linus Aronsson; Axel Bengtsson; William Torén; Roland Andersson; Daniel Ansari
Journal:  Int J Surg       Date:  2019-09-20       Impact factor: 6.071

8.  A population-based, descriptive analysis of malignant intraductal papillary mucinous neoplasms of the pancreas.

Authors:  Hoa Le; Argyrios Ziogas; Jessica M Rhee; John G Lee; Steven M Lipkin; Jason A Zell
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2008-10       Impact factor: 4.254

9.  Clinical and pathological features of five-year survivors after pancreatectomy for pancreatic adenocarcinoma.

Authors:  Kenjiro Kimura; Ryosuke Amano; Bunzo Nakata; Sadaaki Yamazoe; Keiichiro Hirata; Akihiro Murata; Kotaro Miura; Kohei Nishio; Toshiki Hirakawa; Masaichi Ohira; Kosei Hirakawa
Journal:  World J Surg Oncol       Date:  2014-11-27       Impact factor: 2.754

10.  Comparison of SEER Treatment Data With Medicare Claims.

Authors:  Anne-Michelle Noone; Jennifer L Lund; Angela Mariotto; Kathleen Cronin; Timothy McNeel; Dennis Deapen; Joan L Warren
Journal:  Med Care       Date:  2016-09       Impact factor: 3.178

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