Literature DB >> 33758365

CRISPR activation screen in mice identifies novel membrane proteins enhancing pulmonary metastatic colonisation.

Victoria Harle1, Gemma Turner1, Louise van der Weyden1, Victoria Offord1, Vivek Iyer1, Alastair Droop1, Agnieszka Swiatkowska1, Roy Rabbie1, Andrew D Campbell2, Owen J Sansom2,3, Mercedes Pardo4, Jyoti S Choudhary4, Ingrid Ferreira1, Mark Tullett5, Mark J Arends6, Anneliese O Speak1, David J Adams7.   

Abstract

Melanoma represents ~5% of all cutaneous malignancies, yet accounts for the majority of skin cancer deaths due to its propensity to metastasise. To develop new therapies, novel target molecules must to be identified and the accessibility of cell surface proteins makes them attractive targets. Using CRISPR activation technology, we screened a library of guide RNAs targeting membrane protein-encoding genes to identify cell surface molecules whose upregulation enhances the metastatic pulmonary colonisation capabilities of tumour cells in vivo. We show that upregulated expression of the cell surface protein LRRN4CL led to increased pulmonary metastases in mice. Critically, LRRN4CL expression was elevated in melanoma patient samples, with high expression levels correlating with decreased survival. Collectively, our findings uncover an unappreciated role for LRRN4CL in the outcome of melanoma patients and identifies a potential therapeutic target and biomarker.

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Year:  2021        PMID: 33758365      PMCID: PMC7987976          DOI: 10.1038/s42003-021-01912-w

Source DB:  PubMed          Journal:  Commun Biol        ISSN: 2399-3642


  56 in total

1.  Formylpeptide receptor FPR and the rapid growth of malignant human gliomas.

Authors:  Ye Zhou; Xiuwu Bian; Yingying Le; Wanghua Gong; Jinyue Hu; Xia Zhang; Lihua Wang; Pablo Iribarren; Rosalba Salcedo; O M Zack Howard; William Farrar; Ji Ming Wang
Journal:  J Natl Cancer Inst       Date:  2005-06-01       Impact factor: 13.506

2.  Relationship between hyaluronan production and metastatic potential of mouse mammary carcinoma cells.

Authors:  N Itano; T Sawai; O Miyaishi; K Kimata
Journal:  Cancer Res       Date:  1999-05-15       Impact factor: 12.701

3.  Ultraviolet-radiation-induced inflammation promotes angiotropism and metastasis in melanoma.

Authors:  Tobias Bald; Thomas Quast; Jennifer Landsberg; Meri Rogava; Nicole Glodde; Dorys Lopez-Ramos; Judith Kohlmeyer; Stefanie Riesenberg; Debby van den Boorn-Konijnenberg; Cornelia Hömig-Hölzel; Raphael Reuten; Benjamin Schadow; Heike Weighardt; Daniela Wenzel; Iris Helfrich; Dirk Schadendorf; Wilhelm Bloch; Marco E Bianchi; Claire Lugassy; Raymond L Barnhill; Manuel Koch; Bernd K Fleischmann; Irmgard Förster; Wolfgang Kastenmüller; Waldemar Kolanus; Michael Hölzel; Evelyn Gaffal; Thomas Tüting
Journal:  Nature       Date:  2014-02-26       Impact factor: 49.962

4.  Significance of the Lysyl Oxidase Members Lysyl Oxidase Like 1, 3, and 4 in Gastric Cancer.

Authors:  Hiroaki Kasashima; Masakazu Yashiro; Tomohisa Okuno; Yuichiro Miki; Kisyu Kitayama; Go Masuda; Haruhito Kinoshita; Tamami Morisaki; Tatsunari Fukuoka; Tsuyoshi Hasegawa; Katsunobu Sakurai; Takahiro Toyokawa; Naoshi Kubo; Hiroaki Tanaka; Kazuya Muguruma; Kosei Hirakawa; Masaichi Ohira
Journal:  Digestion       Date:  2018-07-25       Impact factor: 3.216

5.  Functional and molecular characterisation of EO771.LMB tumours, a new C57BL/6-mouse-derived model of spontaneously metastatic mammary cancer.

Authors:  Cameron N Johnstone; Yvonne E Smith; Yuan Cao; Allan D Burrows; Ryan S N Cross; Xiawei Ling; Richard P Redvers; Judy P Doherty; Bedrich L Eckhardt; Anthony L Natoli; Christina M Restall; Erin Lucas; Helen B Pearson; Siddhartha Deb; Kara L Britt; Alexandra Rizzitelli; Jason Li; Judith H Harmey; Normand Pouliot; Robin L Anderson
Journal:  Dis Model Mech       Date:  2015-01-29       Impact factor: 5.758

6.  HTSeq--a Python framework to work with high-throughput sequencing data.

Authors:  Simon Anders; Paul Theodor Pyl; Wolfgang Huber
Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

7.  Targeting RAS-driven human cancer cells with antibodies to upregulated and essential cell-surface proteins.

Authors:  Alexander J Martinko; Charles Truillet; Olivier Julien; Juan E Diaz; Max A Horlbeck; Gordon Whiteley; Josip Blonder; Jonathan S Weissman; Sourav Bandyopadhyay; Michael J Evans; James A Wells
Journal:  Elife       Date:  2018-01-23       Impact factor: 8.713

8.  JACKS: joint analysis of CRISPR/Cas9 knockout screens.

Authors:  Felicity Allen; Fiona Behan; Anton Khodak; Francesco Iorio; Kosuke Yusa; Mathew Garnett; Leopold Parts
Journal:  Genome Res       Date:  2019-01-23       Impact factor: 9.043

9.  Comparative genomics reveals that loss of lunatic fringe (LFNG) promotes melanoma metastasis.

Authors:  Martin Del Castillo Velasco-Herrera; Louise van der Weyden; Jeremie Nsengimana; Anneliese O Speak; Marcela K Sjöberg; David Timothy Bishop; Göran Jönsson; Julia Newton-Bishop; David J Adams
Journal:  Mol Oncol       Date:  2018-01-07       Impact factor: 6.603

10.  A molecular cell atlas of the human lung from single-cell RNA sequencing.

Authors:  Kyle J Travaglini; Ahmad N Nabhan; Lolita Penland; Rahul Sinha; Astrid Gillich; Rene V Sit; Stephen Chang; Stephanie D Conley; Yasuo Mori; Jun Seita; Gerald J Berry; Joseph B Shrager; Ross J Metzger; Christin S Kuo; Norma Neff; Irving L Weissman; Stephen R Quake; Mark A Krasnow
Journal:  Nature       Date:  2020-11-18       Impact factor: 49.962

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  3 in total

1.  CRISPR Guide RNA Library Screens in Human Induced Pluripotent Stem Cells.

Authors:  Yan Zhou; Qiang Fu; Huijun Shi; Guangqian Zhou
Journal:  Methods Mol Biol       Date:  2022

Review 2.  Common computational tools for analyzing CRISPR screens.

Authors:  Medina Colic; Traver Hart
Journal:  Emerg Top Life Sci       Date:  2021-12-21

3.  Nine-gene signature and nomogram for predicting survival in patients with head and neck squamous cell carcinoma.

Authors:  Fan Yang; Liu-Qing Zhou; Hui-Wen Yang; Yan-Jun Wang
Journal:  Front Genet       Date:  2022-08-24       Impact factor: 4.772

  3 in total

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