Literature DB >> 33754213

Molecular strategies to enhance stability and catalysis of extremophile-derived α-amylase using computational biology.

Nisha Gupta1, Esmil Beliya1,2, Jai Shankar Paul3, Shubhra Tiwari1, Shriram Kunjam4, Shailesh Kumar Jadhav1.   

Abstract

α-Amylase is the most significant glycoside hydrolase having applications in various industries. It cleaves the α,1-4 glucosidic linkages of polysaccharides like starch, glycogen to yield a small polymer of glucose in α-anomeric configuration. α-Amylase is produced by all the three domains of life but microorganisms are preferred sources for industrial-scale production due to several advantages. Enormous studies and research have been done in this field in the past few decades. Still, it is requisite to work on enzyme stability and catalysis, as it loses its functionality in extreme. As the enzyme loses its structural and catalytic property under extreme environmental conditions, it is mandatory to confer some potential strategies for enhancing enzyme behaviour in such conditions. This limitation of an enzyme can be overcome up to some extent by extremophiles. They serve as an excellent source of α-amylase with outstanding features. This review is an attempt to encapsulate some structure-based strategies for improving enzyme behaviour thereby enabling researchers to selectively amend any of the strategies as per requirement during upstream and downstream processing for higher enzyme yield and stability. Thus, it will provide some cutting-edge strategies for tailoring α-amylase producing organism and enzyme with the help of several computational biology tools.

Entities:  

Keywords:  Computational biology; Extremophiles; Glycoside hydrolase; Structural insights; α-Amylase

Mesh:

Substances:

Year:  2021        PMID: 33754213     DOI: 10.1007/s00792-021-01223-2

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  36 in total

Review 1.  Molecular adaptations to cold in psychrophilic enzymes.

Authors:  G Feller
Journal:  Cell Mol Life Sci       Date:  2003-04       Impact factor: 9.261

2.  Cloning, enhanced expression and characterization of an α-amylase gene from a wild strain in B. subtilis WB800.

Authors:  Jing Chen; Xianghua Chen; Jun Dai; Guangrong Xie; Luying Yan; Lina Lu; Jianhua Chen
Journal:  Int J Biol Macromol       Date:  2015-06-16       Impact factor: 6.953

3.  Purification, biochemical, and molecular characterization of a novel extracellular thermostable and alkaline α-amylase from Tepidimonas fonticaldi strain HB23.

Authors:  Fawzi Allala; Khelifa Bouacem; Nawel Boucherba; Zahra Azzouz; Sondes Mechri; Mouna Sahnoun; Said Benallaoua; Hocine Hacene; Bassem Jaouadi; Amel Bouanane-Darenfed
Journal:  Int J Biol Macromol       Date:  2019-03-27       Impact factor: 6.953

Review 4.  Halophiles and their enzymes: negativity put to good use.

Authors:  Shiladitya DasSarma; Priya DasSarma
Journal:  Curr Opin Microbiol       Date:  2015-06-09       Impact factor: 7.934

Review 5.  α-Amylase: an enzyme specificity found in various families of glycoside hydrolases.

Authors:  Štefan Janeček; Birte Svensson; E Ann MacGregor
Journal:  Cell Mol Life Sci       Date:  2013-06-27       Impact factor: 9.261

Review 6.  Metagenomic analysis of uncultured microorganisms and their enzymatic attributes.

Authors:  Tanveer Bilal; Bisma Malik; Khalid Rehman Hakeem
Journal:  J Microbiol Methods       Date:  2018-11-16       Impact factor: 2.363

7.  A new GH13 subfamily represented by the α-amylase from the halophilic archaeon Haloarcula hispanica.

Authors:  Štefan Janeček; Barbora Zámocká
Journal:  Extremophiles       Date:  2019-11-16       Impact factor: 2.395

8.  Production of a novel α-amylase by Bacillus atrophaeus NRC1 isolated from honey: Purification and characterization.

Authors:  Ahmed M Abd-Elaziz; Eman A Karam; Manal M Ghanem; Maysa E Moharam; Amany L Kansoh
Journal:  Int J Biol Macromol       Date:  2020-01-13       Impact factor: 6.953

9.  The Use of Commercially Available Alpha-Amylase Compounds to Inhibit and Remove Staphylococcus aureus Biofilms.

Authors:  Bradford Craigen; Aliza Dashiff; Daniel E Kadouri
Journal:  Open Microbiol J       Date:  2011-06-01

10.  Isolation, identification and in silico analysis of alpha-amylase gene of Aspergillus niger strain CSA35 obtained from cassava undergoing spoilage.

Authors:  Oghenetega J Avwioroko; Akpovwehwee A Anigboro; Nnanna N Unachukwu; Nyerhovwo J Tonukari
Journal:  Biochem Biophys Rep       Date:  2018-04-06
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.