Literature DB >> 26066288

Halophiles and their enzymes: negativity put to good use.

Shiladitya DasSarma1, Priya DasSarma2.   

Abstract

Halophilic microorganisms possess stable enzymes that function in very high salinity, an extreme condition that leads to denaturation, aggregation, and precipitation of most other proteins. Genomic and structural analyses have established that the enzymes of halophilic Archaea and many halophilic Bacteria are negatively charged due to an excess of acidic over basic residues, and altered hydrophobicity, which enhance solubility and promote function in low water activity conditions. Here, we provide an update on recent bioinformatic analysis of predicted halophilic proteomes as well as experimental molecular studies on individual halophilic enzymes. Recent efforts on discovery and utilization of halophiles and their enzymes for biotechnology, including biofuel applications are also considered.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 26066288      PMCID: PMC4729366          DOI: 10.1016/j.mib.2015.05.009

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  45 in total

1.  Hydration dynamics of a halophilic protein in folded and unfolded states.

Authors:  Johan Qvist; Gabriel Ortega; Xavier Tadeo; Oscar Millet; Bertil Halle
Journal:  J Phys Chem B       Date:  2012-03-02       Impact factor: 2.991

2.  Multiple propionyl coenzyme A-supplying pathways for production of the bioplastic poly(3-hydroxybutyrate-co-3-hydroxyvalerate) in Haloferax mediterranei.

Authors:  Jing Han; Jing Hou; Fan Zhang; Guomin Ai; Ming Li; Shuangfeng Cai; Hailong Liu; Lei Wang; Zejian Wang; Siliang Zhang; Lei Cai; Dahe Zhao; Jian Zhou; Hua Xiang
Journal:  Appl Environ Microbiol       Date:  2013-02-22       Impact factor: 4.792

3.  An extremely halophilic proteobacterium combines a highly acidic proteome with a low cytoplasmic potassium content.

Authors:  Ratnakar Deole; Jean Challacombe; Douglas W Raiford; Wouter D Hoff
Journal:  J Biol Chem       Date:  2012-11-09       Impact factor: 5.157

4.  Arhodomonas sp. strain Seminole and its genetic potential to degrade aromatic compounds under high-salinity conditions.

Authors:  Sonal Dalvi; Carla Nicholson; Fares Najar; Bruce A Roe; Patricia Canaan; Steven D Hartson; Babu Z Fathepure
Journal:  Appl Environ Microbiol       Date:  2014-08-22       Impact factor: 4.792

Review 5.  Salt-dependent properties of proteins from extremely halophilic bacteria.

Authors:  J K Lanyi
Journal:  Bacteriol Rev       Date:  1974-09

6.  Stability of halophilic proteins: from dipeptide attributes to discrimination classifier.

Authors:  Guangya Zhang; Ge Huihua; Lin Yi
Journal:  Int J Biol Macromol       Date:  2012-11-06       Impact factor: 6.953

Review 7.  Life at high salt concentrations, intracellular KCl concentrations, and acidic proteomes.

Authors:  Aharon Oren
Journal:  Front Microbiol       Date:  2013-11-05       Impact factor: 5.640

8.  Phylogenetically driven sequencing of extremely halophilic archaea reveals strategies for static and dynamic osmo-response.

Authors:  Erin A Becker; Phillip M Seitzer; Andrew Tritt; David Larsen; Megan Krusor; Andrew I Yao; Dongying Wu; Dominique Madern; Jonathan A Eisen; Aaron E Darling; Marc T Facciotti
Journal:  PLoS Genet       Date:  2014-11-13       Impact factor: 5.917

9.  Cloning, overexpression, purification, and characterization of a polyextremophilic β-galactosidase from the Antarctic haloarchaeon Halorubrum lacusprofundi.

Authors:  Ram Karan; Melinda D Capes; Priya DasSarma; Shiladitya DasSarma
Journal:  BMC Biotechnol       Date:  2013-01-16       Impact factor: 2.563

Review 10.  Biodegradation of petroleum hydrocarbons in hypersaline environments.

Authors:  Luiz Fernando Martins; Raquel Silva Peixoto
Journal:  Braz J Microbiol       Date:  2012-06-01       Impact factor: 2.476

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  60 in total

1.  Solid-state fermentation as a potential technique for esterase/lipase production by halophilic archaea.

Authors:  Martha Martin del Campo; Rosa M Camacho; Juan C Mateos-Díaz; Marcelo Müller-Santos; Jesus Córdova; Jorge A Rodríguez
Journal:  Extremophiles       Date:  2015-09-14       Impact factor: 2.395

2.  Isolation and characterization of bacteria associated with the rhizosphere of halophytes (Salsola stocksii and Atriplex amnicola) for production of hydrolytic enzymes.

Authors:  Salma Mukhtar; Samina Mehnaz; Muhammad Sajjad Mirza; Kauser Abdulla Malik
Journal:  Braz J Microbiol       Date:  2019-01-08       Impact factor: 2.476

3.  Characterization of detergent compatible protease from halophilic Virgibacillus sp. CD6.

Authors:  Ming Quan Lam; Nik Nurhidayu Nik Mut; Suganthi Thevarajoo; Sye Jinn Chen; Chitra Selvaratnam; Huszalina Hussin; Haryati Jamaluddin; Chun Shiong Chong
Journal:  3 Biotech       Date:  2018-01-31       Impact factor: 2.406

4.  An Antarctic Extreme Halophile and Its Polyextremophilic Enzyme: Effects of Perchlorate Salts.

Authors:  Victoria J Laye; Shiladitya DasSarma
Journal:  Astrobiology       Date:  2017-11-30       Impact factor: 4.335

Review 5.  Role of extremophiles and their extremozymes in biorefinery process of lignocellulose degradation.

Authors:  Dixita Chettri; Ashwani Kumar Verma; Lija Sarkar; Anil Kumar Verma
Journal:  Extremophiles       Date:  2021-03-25       Impact factor: 2.395

Review 6.  Molecular strategies to enhance stability and catalysis of extremophile-derived α-amylase using computational biology.

Authors:  Nisha Gupta; Esmil Beliya; Jai Shankar Paul; Shubhra Tiwari; Shriram Kunjam; Shailesh Kumar Jadhav
Journal:  Extremophiles       Date:  2021-03-22       Impact factor: 2.395

7.  Bioremediation potential of a halophilic Halobacillus sp. strain, EG1HP4QL: exopolysaccharide production, crude oil degradation, and heavy metal tolerance.

Authors:  Ibrahim M Ibrahim; Svetlana A Konnova; Elena N Sigida; Elena V Lyubun; Anna Yu Muratova; Yulia P Fedonenko; Кhaled Elbanna
Journal:  Extremophiles       Date:  2019-11-07       Impact factor: 2.395

8.  Characterization of a novel cold-active xylanase from Luteimonas species.

Authors:  Zhenggang Han; Fang Shang-Guan; Jiangke Yang
Journal:  World J Microbiol Biotechnol       Date:  2018-07-27       Impact factor: 3.312

9.  Biochemical characterization of a halophilic, alkalithermophilic protease from Alkalibacillus sp. NM-Da2.

Authors:  Asmaa R Abdel-Hamed; Dina M Abo-Elmatty; Juergen Wiegel; Noha M Mesbah
Journal:  Extremophiles       Date:  2016-10-18       Impact factor: 2.395

Review 10.  Halophiles: biology, adaptation, and their role in decontamination of hypersaline environments.

Authors:  Mohamed Faraj Edbeib; Roswanira Abdul Wahab; Fahrul Huyop
Journal:  World J Microbiol Biotechnol       Date:  2016-06-25       Impact factor: 3.312

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