Literature DB >> 33754169

Effect of Met/Leu substitutions on the stability of NAD+-dependent formate dehydrogenases from Gossypium hirsutum.

Sinem Kurt1,2, Emel Ordu3.   

Abstract

NAD+-dependent formate dehydrogenases (FDHs) are extensively used in the regeneration of NAD(P)H and the reduction of CO2 to formate. In addition to their industrial importance, FDHs also play a crucial role in the maintenance of a reducing environment to combat oxidative stress in plants. Therefore, it is important to investigate the response of NAD+-dependent FDH against both temperature and H2O2, to understand the defense mechanisms, and to increase its stability under oxidative stress conditions. In the present study, we characterized the oxidative and thermal stability of NAD+-dependent FDH isolated from cotton, Gossypium hirsutum (GhFDH), by investigating the effect of Met/Leu substitutions in the positions of 225, 234, and 243. Results showed that the single mutant, M234L (0.72 s-1 mM-1), and the triple mutant, M225L/M234L/M243L (0.55 s-1 mM-1), have higher catalytic efficiency than the native enzyme. Substitution of methionine by leucine on the position of 243 increased the free energy gain by 670 J mol-1. The most remarkable results in chemical stability were seen for double and triple mutants, cumulatively. Double and triple substitution of Met to Leu (M225L/M243L and M225L/M243L/M234L) reduce the kefin by a factor of 2 (12.3×10-5 and 12.8×10-5 s-1, respectively.Key points• The closer the residue to NAD+, in which we substituted methionine to leucine, the lower the stability against H2O2 we observed.• The significant gain in the Tm value for the M243L mutant was observed as +5°C.• Residue 234 occupies a critical position for oxidation defense mechanisms. Graphical abstract (a) Methionine amino acids on the protein surface are susceptible to oxidative stress and can be converted to methionine sulfoxide by reactive oxygen derivatives (such as hydrogen peroxide). Therefore, they are critical regions in the change of protein conformation and loss of activity. (b) Replacing the amino acid methionine, which is susceptible to oxidation due to the sulfur group, with the oxidation-resistant leucine amino acid is an important strategy in increasing oxidative stability.

Entities:  

Keywords:  Cumulative mutation effect; Methionine; Oxidative stability; Thermal stability

Mesh:

Substances:

Year:  2021        PMID: 33754169     DOI: 10.1007/s00253-021-11232-y

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  36 in total

1.  The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling.

Authors:  Konstantin Arnold; Lorenza Bordoli; Jürgen Kopp; Torsten Schwede
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2.  Improvement of the soy formate dehydrogenase properties by rational design.

Authors:  I S Kargov; S Y Kleimenov; S S Savin; V I Tishkov; A A Alekseeva
Journal:  Protein Eng Des Sel       Date:  2015-03-04       Impact factor: 1.650

3.  Advantages of formate dehydrogenase reaction for efficient NAD+ quantification in biological samples.

Authors:  Artem V Artiukhov; Anastasia A Pometun; Sofia A Zubanova; Vladimir I Tishkov; Victoria I Bunik
Journal:  Anal Biochem       Date:  2020-06-18       Impact factor: 3.365

4.  Phosphorylation of formate dehydrogenase in potato tuber mitochondria.

Authors:  Natalia V Bykova; Allan Stensballe; Helge Egsgaard; Ole N Jensen; Ian M Moller
Journal:  J Biol Chem       Date:  2003-04-24       Impact factor: 5.157

5.  Selective Oxidation of Methionine and Tryptophan Residues in a Therapeutic IgG1 Molecule.

Authors:  Emilien Folzer; Katharina Diepold; Katrin Bomans; Christof Finkler; Roland Schmidt; Patrick Bulau; Jörg Huwyler; Hanns-Christian Mahler; Atanas V Koulov
Journal:  J Pharm Sci       Date:  2015-05-25       Impact factor: 3.534

6.  Effects of disulphide bridges on the activity and stability of the formate dehydrogenase from Candida methylica.

Authors:  Nevin Gül Karagüler; Richard B Sessions; Anthony R Clarke
Journal:  Biotechnol Lett       Date:  2007-05-04       Impact factor: 2.461

7.  Methionine oxidation activates a transcription factor in response to oxidative stress.

Authors:  Adrian Drazic; Haruko Miura; Jirka Peschek; Yan Le; Nina C Bach; Thomas Kriehuber; Jeannette Winter
Journal:  Proc Natl Acad Sci U S A       Date:  2013-05-20       Impact factor: 11.205

8.  Engineering of formate dehydrogenase: synergistic effect of mutations affecting cofactor specificity and chemical stability.

Authors:  Kathrin Hoelsch; Ilka Sührer; Moritz Heusel; Dirk Weuster-Botz
Journal:  Appl Microbiol Biotechnol       Date:  2012-05-17       Impact factor: 4.813

9.  Methionine in a protein hydrophobic core drives tight interactions required for assembly of spider silk.

Authors:  Julia C Heiby; Benedikt Goretzki; Christopher M Johnson; Ute A Hellmich; Hannes Neuweiler
Journal:  Nat Commun       Date:  2019-09-26       Impact factor: 14.919

10.  In Vivo Selection for Formate Dehydrogenases with High Efficiency and Specificity toward NADP.

Authors:  Liliana Calzadiaz-Ramirez; Carla Calvó-Tusell; Gabriele M M Stoffel; Steffen N Lindner; Sílvia Osuna; Tobias J Erb; Marc Garcia-Borràs; Arren Bar-Even; Carlos G Acevedo-Rocha
Journal:  ACS Catal       Date:  2020-06-08       Impact factor: 13.084

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