Literature DB >> 22588502

Engineering of formate dehydrogenase: synergistic effect of mutations affecting cofactor specificity and chemical stability.

Kathrin Hoelsch1, Ilka Sührer, Moritz Heusel, Dirk Weuster-Botz.   

Abstract

Formate dehydrogenases (FDHs) are frequently used for the regeneration of cofactors in biotransformations employing NAD(P)H-dependent oxidoreductases. Major drawbacks of most native FDHs are their strong preference for NAD(+) and their low operational stability in the presence of reactive organic compounds such as α-haloketones. In this study, the FDH from Mycobacterium vaccae N10 (MycFDH) was engineered in order to obtain an enzyme that is not only capable of regenerating NADPH but also stable toward the α-haloketone ethyl 4-chloroacetoacetate (ECAA). To change the cofactor specificity, amino acids in the conserved NAD(+) binding motif were mutated. Among these mutants, MycFDH A198G/D221Q had the highest catalytic efficiency (k cat/K m) with NADP(+). The additional replacement of two cysteines (C145S/C255V) not only conferred a high resistance to ECAA but also enhanced the catalytic efficiency 6-fold. The resulting quadruple mutant MycFDH C145S/A198G/D221Q/C255V had a specific activity of 4.00 ± 0.13 U mg(-1) and a K m, NADP(+) of 0.147 ± 0.020 mM at 30 °C, pH 7. The A198G replacement had a major impact on the kinetic constants of the enzyme. The corresponding triple mutant, MycFDH C145S/D221Q/C255V, showed the highest specific activity reported to date for a NADP(+)-accepting FDH (v max, 10.25 ± 1.63 U mg(-1)). However, the half-saturation constant for NADP(+) (K m, NADP(+) , 0.92 ± 0.10 mM) was about one order of magnitude higher than the one of the quadruple mutant. Depending on the reaction setup, both novel MycFDH variants could be useful for the production of the chiral synthon ethyl (S)-4-chloro-3-hydroxybutyrate [(S)-ECHB] by asymmetric reduction of ECAA with NADPH-dependent ketoreductases.

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Year:  2012        PMID: 22588502     DOI: 10.1007/s00253-012-4142-9

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  10 in total

Review 1.  Redox cofactor engineering in industrial microorganisms: strategies, recent applications and future directions.

Authors:  Jiaheng Liu; Huiling Li; Guangrong Zhao; Qinggele Caiyin; Jianjun Qiao
Journal:  J Ind Microbiol Biotechnol       Date:  2018-03-27       Impact factor: 3.346

2.  Effect of Met/Leu substitutions on the stability of NAD+-dependent formate dehydrogenases from Gossypium hirsutum.

Authors:  Sinem Kurt; Emel Ordu
Journal:  Appl Microbiol Biotechnol       Date:  2021-03-22       Impact factor: 4.813

3.  Structure-based conversion of the coenzyme requirement of a short-chain dehydrogenase/reductase involved in bacterial alginate metabolism.

Authors:  Ryuichi Takase; Bunzo Mikami; Shigeyuki Kawai; Kousaku Murata; Wataru Hashimoto
Journal:  J Biol Chem       Date:  2014-10-06       Impact factor: 5.157

4.  A synthetic pathway for the fixation of carbon dioxide in vitro.

Authors:  Thomas Schwander; Lennart Schada von Borzyskowski; Simon Burgener; Niña Socorro Cortina; Tobias J Erb
Journal:  Science       Date:  2016-11-18       Impact factor: 47.728

5.  Cofactor Specificity Engineering of Streptococcus mutans NADH Oxidase 2 for NAD(P)(+) Regeneration in Biocatalytic Oxidations.

Authors:  Barbara Petschacher; Nicole Staunig; Monika Müller; Martin Schürmann; Daniel Mink; Stefaan De Wildeman; Karl Gruber; Anton Glieder
Journal:  Comput Struct Biotechnol J       Date:  2014-02-26       Impact factor: 7.271

6.  High-Throughput Screening of Coenzyme Preference Change of Thermophilic 6-Phosphogluconate Dehydrogenase from NADP(+) to NAD(.).

Authors:  Rui Huang; Hui Chen; Chao Zhong; Jae Eung Kim; Yi-Heng Percival Zhang
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Review 7.  Protein Engineering for Nicotinamide Coenzyme Specificity in Oxidoreductases: Attempts and Challenges.

Authors:  Andrea M Chánique; Loreto P Parra
Journal:  Front Microbiol       Date:  2018-02-14       Impact factor: 5.640

8.  "NAD-display": Ultrahigh-Throughput in Vitro Screening of NAD(H) Dehydrogenases Using Bead Display and Flow Cytometry.

Authors:  Laurens Lindenburg; Florian Hollfelder
Journal:  Angew Chem Int Ed Engl       Date:  2021-03-08       Impact factor: 15.336

9.  A Novel NADP-Dependent Formate Dehydrogenase From the Hyperthermophilic Archaeon Thermococcus onnurineus NA1.

Authors:  Ji-In Yang; Seong Hyuk Lee; Ji-Young Ryu; Hyun Sook Lee; Sung Gyun Kang
Journal:  Front Microbiol       Date:  2022-03-15       Impact factor: 5.640

10.  In Vivo Selection for Formate Dehydrogenases with High Efficiency and Specificity toward NADP.

Authors:  Liliana Calzadiaz-Ramirez; Carla Calvó-Tusell; Gabriele M M Stoffel; Steffen N Lindner; Sílvia Osuna; Tobias J Erb; Marc Garcia-Borràs; Arren Bar-Even; Carlos G Acevedo-Rocha
Journal:  ACS Catal       Date:  2020-06-08       Impact factor: 13.084

  10 in total

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