Literature DB >> 33754077

The crosstalk between m6A RNA methylation and other epigenetic regulators: a novel perspective in epigenetic remodeling.

Yanchun Zhao1, Yunhao Chen2, Mei Jin1, Jin Wang1.   

Abstract

Epigenetic regulation involves a range of sophisticated processes which contribute to heritable alterations in gene expression without altering DNA sequence. Regulatory events predominantly include DNA methylation, chromatin remodeling, histone modifications, non-coding RNAs (ncRNAs), and RNA modification. As the most prevalent RNA modification in eukaryotic cells, N6-methyladenosine (m6A) RNA methylation actively participates in the modulation of RNA metabolism. Notably, accumulating evidence has revealed complicated interrelations occurring between m6A and other well-known epigenetic modifications. Their crosstalk conspicuously triggers epigenetic remodeling, further yielding profound impacts on a variety of physiological and pathological processes, especially tumorigenesis. Herein, we provide an up-to-date review of this emerging hot area of biological research, summarizing the interplay between m6A RNA methylation and other epigenetic regulators, and highlighting their underlying functions in epigenetic reprogramming. © The author(s).

Entities:  

Keywords:  DNA methylation; N6-methyladenosine (m6A); RNA modification; chromatin remodeling; histone modification; non-coding RNA (ncRNA)

Mesh:

Substances:

Year:  2021        PMID: 33754077      PMCID: PMC7977459          DOI: 10.7150/thno.54967

Source DB:  PubMed          Journal:  Theranostics        ISSN: 1838-7640            Impact factor:   11.556


  176 in total

1.  Ythdc2 is an N6-methyladenosine binding protein that regulates mammalian spermatogenesis.

Authors:  Phillip J Hsu; Yunfei Zhu; Honghui Ma; Yueshuai Guo; Xiaodan Shi; Yuanyuan Liu; Meijie Qi; Zhike Lu; Hailing Shi; Jianying Wang; Yiwei Cheng; Guanzheng Luo; Qing Dai; Mingxi Liu; Xuejiang Guo; Jiahao Sha; Bin Shen; Chuan He
Journal:  Cell Res       Date:  2017-08-15       Impact factor: 25.617

2.  m6A-dependent biogenesis of circular RNAs in male germ cells.

Authors:  Chong Tang; Yeming Xie; Tian Yu; Na Liu; Zhuqing Wang; Rebekah J Woolsey; Yunge Tang; Xinzong Zhang; Weibing Qin; Ying Zhang; Ge Song; Weiwei Zheng; Juan Wang; Weitian Chen; Xiongyi Wei; Zhe Xie; Rachel Klukovich; Huili Zheng; David R Quilici; Wei Yan
Journal:  Cell Res       Date:  2020-02-11       Impact factor: 25.617

3.  H3K36me2 is highly correlated with m6 A modifications in plants.

Authors:  Sangrea Shim; Hong Gil Lee; Hongwoo Lee; Pil Joon Seo
Journal:  J Integr Plant Biol       Date:  2020-03-24       Impact factor: 7.061

4.  N6-methyladenosine RNA modification regulates embryonic neural stem cell self-renewal through histone modifications.

Authors:  Yang Wang; Yue Li; Minghui Yue; Jun Wang; Sandeep Kumar; Robert J Wechsler-Reya; Zhaolei Zhang; Yuya Ogawa; Manolis Kellis; Gregg Duester; Jing Crystal Zhao
Journal:  Nat Neurosci       Date:  2018-01-15       Impact factor: 24.884

5.  Zc3h13/Flacc is required for adenosine methylation by bridging the mRNA-binding factor Rbm15/Spenito to the m6A machinery component Wtap/Fl(2)d.

Authors:  Philip Knuckles; Tina Lence; Irmgard U Haussmann; Dominik Jacob; Nastasja Kreim; Sarah H Carl; Irene Masiello; Tina Hares; Rodrigo Villaseñor; Daniel Hess; Miguel A Andrade-Navarro; Marco Biggiogera; Mark Helm; Matthias Soller; Marc Bühler; Jean-Yves Roignant
Journal:  Genes Dev       Date:  2018-03-13       Impact factor: 11.361

6.  Extensive Epitranscriptomic Methylation of A and C Residues on Murine Leukemia Virus Transcripts Enhances Viral Gene Expression.

Authors:  David G Courtney; Andrea Chalem; Hal P Bogerd; Brittany A Law; Edward M Kennedy; Christopher L Holley; Bryan R Cullen
Journal:  mBio       Date:  2019-06-11       Impact factor: 7.867

7.  Long non-coding RNA RHPN1-AS1 promotes tumorigenesis and metastasis of ovarian cancer by acting as a ceRNA against miR-596 and upregulating LETM1.

Authors:  Junrong Wang; Weimin Ding; Yingke Xu; Enfu Tao; Miaojun Mo; Wei Xu; Xu Cai; Xiaomin Chen; Junhui Yuan; Xiuying Wu
Journal:  Aging (Albany NY)       Date:  2020-03-12       Impact factor: 5.682

8.  Combination of Decitabine and Entinostat Synergistically Inhibits Urothelial Bladder Cancer Cells via Activation of FoxO1.

Authors:  Chenyin Wang; Alexandra Hamacher; Patrick Petzsch; Karl Köhrer; Günter Niegisch; Michèle J Hoffmann; Wolfgang A Schulz; Matthias U Kassack
Journal:  Cancers (Basel)       Date:  2020-02-03       Impact factor: 6.639

9.  VIRMA-Dependent N6-Methyladenosine Modifications Regulate the Expression of Long Non-Coding RNAs CCAT1 and CCAT2 in Prostate Cancer.

Authors:  Daniela Barros-Silva; João Lobo; Catarina Guimarães-Teixeira; Isa Carneiro; Jorge Oliveira; Elena S Martens-Uzunova; Rui Henrique; Carmen Jerónimo
Journal:  Cancers (Basel)       Date:  2020-03-25       Impact factor: 6.639

10.  DART-seq: an antibody-free method for global m6A detection.

Authors:  Kate D Meyer
Journal:  Nat Methods       Date:  2019-09-23       Impact factor: 28.547

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  16 in total

1.  3'untranslated regions of tumor suppressor genes evolved specific features to favor cancer resistance.

Authors:  Dan Huang; Xiansong Wang; Ziheng Huang; Yingzhi Liu; Xiaodong Liu; Tony Gin; Sunny Hei Wong; Jun Yu; Lin Zhang; Matthew Tak Vai Chan; Huarong Chen; William Ka Kei Wu
Journal:  Oncogene       Date:  2022-05-06       Impact factor: 9.867

2.  LINC01021 maintains tumorigenicity by enhancing N6-methyladenosine reader IMP2 dependent stabilization of MSX1 and JARID2: implication in colorectal cancer.

Authors:  Huizhe Wu; Xiangyu Ding; Xiaoyun Hu; Qing Zhao; Qiuchen Chen; Tong Sun; Yalun Li; Hao Guo; Meng Li; Ziming Gao; Weifan Yao; Lin Zhao; Kai Li; Minjie Wei
Journal:  Oncogene       Date:  2022-02-16       Impact factor: 9.867

Review 3.  Impact of N6-methyladenosine (m6A) modification on immunity.

Authors:  Raghda A Elsabbagh; Mona Rady; Carsten Watzl; Khaled Abou-Aisha; Mohamed Z Gad
Journal:  Cell Commun Signal       Date:  2022-09-09       Impact factor: 7.525

4.  Lipid metabolism and m6A RNA methylation are altered in lambs supplemented rumen-protected methionine and lysine in a low-protein diet.

Authors:  Kefyalew Gebeyew; Chao Yang; Hui Mi; Yan Cheng; Tianxi Zhang; Fan Hu; Qiongxian Yan; Zhixiong He; Shaoxun Tang; Zhiliang Tan
Journal:  J Anim Sci Biotechnol       Date:  2022-07-13

Review 5.  Driving Chromatin Organisation through N6-methyladenosine Modification of RNA: What Do We Know and What Lies Ahead?

Authors:  Tommaso Selmi; Chiara Lanzuolo
Journal:  Genes (Basel)       Date:  2022-02-12       Impact factor: 4.096

Review 6.  Current Advances in N6-Methyladenosine Methylation Modification During Bladder Cancer.

Authors:  Qiang Liu
Journal:  Front Genet       Date:  2022-01-11       Impact factor: 4.599

7.  YTHDF2 alleviates cardiac hypertrophy via regulating Myh7 mRNA decoy.

Authors:  Hongfei Xu; Zhen Wang; Miao Chen; Wenting Zhao; Tingting Tao; Liang Ma; Yiming Ni; Weidong Li
Journal:  Cell Biosci       Date:  2021-07-15       Impact factor: 7.133

8.  m6A-related lncRNAs predict prognosis and indicate immune microenvironment in acute myeloid leukemia.

Authors:  Fangmin Zhong; Fangyi Yao; Ying Cheng; Jing Liu; Nan Zhang; Shuqi Li; Meiyong Li; Bo Huang; Xiaozhong Wang
Journal:  Sci Rep       Date:  2022-02-02       Impact factor: 4.379

Review 9.  N6-Methyladenosine in Cancer Immunotherapy: An Undervalued Therapeutic Target.

Authors:  Chao Quan; Othmane Belaydi; Jiao Hu; Huihuang Li; Anze Yu; Peihua Liu; Zhenglin Yi; Dongxu Qiu; Wenbiao Ren; Hongzhi Ma; Guanghui Gong; Zhenyu Ou; Minfeng Chen; Yin Sun; Jinbo Chen; Xiongbing Zu
Journal:  Front Immunol       Date:  2021-08-30       Impact factor: 7.561

Review 10.  Impact of Nutrition on Age-Related Epigenetic RNA Modifications in Rats.

Authors:  Patrizia D'Aquila; Francesco De Rango; Ersilia Paparazzo; Maurizio Mandalà; Dina Bellizzi; Giuseppe Passarino
Journal:  Nutrients       Date:  2022-03-15       Impact factor: 5.717

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