Literature DB >> 33751803

Efficient generation of homozygous substitutions in rice in one generation utilizing an rABE8e base editor.

Chuang Wei1,2, Chong Wang1,2, Meng Jia1,2, Hong-Xuan Guo1,2, Peng-Yu Luo1,2, Mu-Gui Wang3, Jian-Kang Zhu3, Hui Zhang1,2.   

Abstract

A new deaminase, TadA8e, was recently evolved in the laboratory. TadA8e catalyzes DNA deamination over 1,000 times faster than ABE7.10. We developed a high-efficiency adenine base editor, rABE8e (rice ABE8e), combining monomeric TadA8e, bis-bpNLS and codon optimization. rABE8e had substantially increased editing efficiencies at NG-protospacer adjacent motif (PAM) and NGG-PAM target sequences compared with ABEmax. For most targets, rABE8e exhibited nearly 100% editing efficiency and high homozygous substitution rates in the specific editing window, especially at Positions A5 and A6. The ability to rapidly generate plant materials with homozygous base substitutions will benefit gene function research and precision molecular breeding.
© 2021 Institute of Botany, Chinese Academy of Sciences.

Entities:  

Keywords:  CRISPR; base editing; rABE8e; rice

Mesh:

Substances:

Year:  2021        PMID: 33751803     DOI: 10.1111/jipb.13089

Source DB:  PubMed          Journal:  J Integr Plant Biol        ISSN: 1672-9072            Impact factor:   7.061


  6 in total

Review 1.  Improvement of base editors and prime editors advances precision genome engineering in plants.

Authors:  Kai Hua; Peijin Han; Jian-Kang Zhu
Journal:  Plant Physiol       Date:  2022-03-28       Impact factor: 8.340

2.  Base Editors for Citrus Gene Editing.

Authors:  Xiaoen Huang; Yuanchun Wang; Nian Wang
Journal:  Front Genome Ed       Date:  2022-02-28

3.  Expanding the Editing Window of Cytidine Base Editors With the Rad51 DNA-Binding Domain in Rice.

Authors:  Chunjie Wei; Hao Liu; Wenwen Wang; Pengyu Luo; Qiuling Chen; Rou Li; Chong Wang; José Ramón Botella; Hui Zhang
Journal:  Front Plant Sci       Date:  2022-04-25       Impact factor: 5.753

4.  PhieABEs: a PAM-less/free high-efficiency adenine base editor toolbox with wide target scope in plants.

Authors:  Jiantao Tan; Dongchang Zeng; Yanchang Zhao; Yaxi Wang; Taoli Liu; Shuangchun Li; Yang Xue; Yuyu Luo; Xianrong Xie; Letian Chen; Yao-Guang Liu; Qinlong Zhu
Journal:  Plant Biotechnol J       Date:  2022-01-17       Impact factor: 13.263

5.  Genome-wide analyses of PAM-relaxed Cas9 genome editors reveal substantial off-target effects by ABE8e in rice.

Authors:  Yuechao Wu; Qiurong Ren; Zhaohui Zhong; Guanqing Liu; Yangshuo Han; Yu Bao; Li Liu; Shuyue Xiang; Shuo Liu; Xu Tang; Jianping Zhou; Xuelian Zheng; Simon Sretenovic; Tao Zhang; Yiping Qi; Yong Zhang
Journal:  Plant Biotechnol J       Date:  2022-05-23       Impact factor: 13.263

6.  Exploring C-to-G and A-to-Y Base Editing in Rice by Using New Vector Tools.

Authors:  Dongchang Zeng; Zhiye Zheng; Yuxin Liu; Taoli Liu; Tie Li; Jianhong Liu; Qiyu Luo; Yang Xue; Shengting Li; Nan Chai; Suize Yu; Xianrong Xie; Yao-Guang Liu; Qinlong Zhu
Journal:  Int J Mol Sci       Date:  2022-07-20       Impact factor: 6.208

  6 in total

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