Literature DB >> 33751438

The In Vitro Production of prFMN for Reconstitution of UbiD Enzymes.

Stephen A Marshall1, Karl Fisher1, David Leys2.   

Abstract

Prenylated flavin (prFMN) is a modified FMN cofactor, the isoalloxazine is extended by an additional six membered nonaromatic ring. The modification confers azomethine ylide characteristics on the oxidised prFMN, allowing it to support the reversible nonoxidative decarboxylation of unsaturated acids by the UbiD family of decarboxylases. In absence of a chemical synthesis route for prFMN, enzymatic production by the flavin prenyltransferase, UbiX, is required for in vitro reconstitution of prFMN-dependent enzymes. Here we provide an overview of the methods for producing prFMN in vitro using the flavin prenyltransferase UbiX, and the subsequent reconstitution and activation of UbiD enzymes.

Entities:  

Keywords:  Carboxylation; Cofactor reconstitution; Decarboxylation; Flavin; Prenylation; UbiD; UbiX

Mesh:

Substances:

Year:  2021        PMID: 33751438     DOI: 10.1007/978-1-0716-1286-6_14

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  12 in total

1.  The decarboxylation of the weak-acid preservative, sorbic acid, is encoded by linked genes in Aspergillus spp.

Authors:  Andrew Plumridge; Petter Melin; Malcolm Stratford; Michaela Novodvorska; Lee Shunburne; Paul S Dyer; Johannes A Roubos; Hildegard Menke; Jacques Stark; Hein Stam; David B Archer
Journal:  Fungal Genet Biol       Date:  2010-05-07       Impact factor: 3.495

2.  PAD1 and FDC1 are essential for the decarboxylation of phenylacrylic acids in Saccharomyces cerevisiae.

Authors:  Nobuhiko Mukai; Kazuo Masaki; Tsutomu Fujii; Makoto Kawamukai; Haruyuki Iefuji
Journal:  J Biosci Bioeng       Date:  2009-12-16       Impact factor: 2.894

3.  Kinetic Characterization of Prenyl-Flavin Synthase from Saccharomyces cerevisiae.

Authors:  Nattapol Arunrattanamook; E Neil G Marsh
Journal:  Biochemistry       Date:  2017-12-27       Impact factor: 3.162

Review 4.  Biosynthesis and physiology of coenzyme Q in bacteria.

Authors:  Laurent Aussel; Fabien Pierrel; Laurent Loiseau; Murielle Lombard; Marc Fontecave; Frédéric Barras
Journal:  Biochim Biophys Acta       Date:  2014-01-28

Review 5.  Flavin metamorphosis: cofactor transformation through prenylation.

Authors:  David Leys
Journal:  Curr Opin Chem Biol       Date:  2018-10-13       Impact factor: 8.822

6.  The UbiX flavin prenyltransferase reaction mechanism resembles class I terpene cyclase chemistry.

Authors:  Stephen A Marshall; Karl A P Payne; Karl Fisher; Mark D White; Aisling Ní Cheallaigh; Arune Balaikaite; Stephen E J Rigby; David Leys
Journal:  Nat Commun       Date:  2019-05-29       Impact factor: 14.919

7.  Decarboxylation of sorbic acid by spoilage yeasts is associated with the PAD1 gene.

Authors:  Malcolm Stratford; Andrew Plumridge; David B Archer
Journal:  Appl Environ Microbiol       Date:  2007-08-31       Impact factor: 4.792

8.  New cofactor supports α,β-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.

Authors:  Karl A P Payne; Mark D White; Karl Fisher; Basile Khara; Samuel S Bailey; David Parker; Nicholas J W Rattray; Drupad K Trivedi; Royston Goodacre; Rebecca Beveridge; Perdita Barran; Stephen E J Rigby; Nigel S Scrutton; Sam Hay; David Leys
Journal:  Nature       Date:  2015-06-17       Impact factor: 49.962

9.  UbiX is a flavin prenyltransferase required for bacterial ubiquinone biosynthesis.

Authors:  Mark D White; Karl A P Payne; Karl Fisher; Stephen A Marshall; David Parker; Nicholas J W Rattray; Drupad K Trivedi; Royston Goodacre; Stephen E J Rigby; Nigel S Scrutton; Sam Hay; David Leys
Journal:  Nature       Date:  2015-06-17       Impact factor: 49.962

10.  Enzymatic Carboxylation of 2-Furoic Acid Yields 2,5-Furandicarboxylic Acid (FDCA).

Authors:  Karl A P Payne; Stephen A Marshall; Karl Fisher; Matthew J Cliff; Diego M Cannas; Cunyu Yan; Derren J Heyes; David A Parker; Igor Larrosa; David Leys
Journal:  ACS Catal       Date:  2019-02-15       Impact factor: 13.084

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.