Literature DB >> 33745738

The assessment of microbiome changes and fecal volatile organic compounds during experimental necrotizing enterocolitis.

Brian D Hosfield1, Natalie A Drucker2, Anthony R Pecoraro2, William C Shelley2, Hongge Li2, Nielson T Baxter3, Troy B Hawkins3, Troy A Markel2.   

Abstract

INTRODUCTION: Necrotizing enterocolitis (NEC) remains a devastating disease that affects the gastrointestinal tract of the preterm infant. Volatile organic compounds (VOCs) have emerged as a non-invasive biomarker in many diseases. We hypothesized that fecal VOC profiles would be significantly different between control and NEC pups in a NEC mouse model.
METHODS: Experimental NEC was induced in five-day-old mice. Breastfed and formula-fed control groups were also studied. After four days, pups were euthanized and intestines were H&E stained and blindly scored. Stool microbiome analysis was performed via 16S rRNA sequencing. VOC analysis was assessed by the CyranoseⓇ 320 eNose device and p<0.05 was significant.
RESULTS: NEC pups had severe intestinal injury when compared to controls. Microbiome analysis showed that both control groups had significantly higher microbial diversity and relative abundance of Lactobacillus than NEC, and lower relative abundance of Escherichia. Fecal VOC profile for NEC pups was significantly different from controls.
CONCLUSIONS: Experimental NEC was associated with intestinal dysbiosis. Fecal VOC analysis by the CyranoseⓇ 320 eNose device can discriminate NEC pups from both breastfed and formula-fed controls. Further research is warranted to establish whether fecal VOCs can be used as a biomarker or predictive algorithm to diagnose NEC.
Copyright © 2021. Published by Elsevier Inc.

Entities:  

Keywords:  Biomarkers; Electronic nose; Fecal volatile organic compounds; Necrotizing enterocolitis

Mesh:

Substances:

Year:  2021        PMID: 33745738      PMCID: PMC8463953          DOI: 10.1016/j.jpedsurg.2021.02.043

Source DB:  PubMed          Journal:  J Pediatr Surg        ISSN: 0022-3468            Impact factor:   2.549


  32 in total

1.  The Assessment of Fecal Volatile Organic Compounds in Healthy Infants: Electronic Nose Device Predicts Patient Demographics and Microbial Enterotype.

Authors:  Brian D Hosfield; Anthony R Pecoraro; Nielson T Baxter; Troy B Hawkins; Troy A Markel
Journal:  J Surg Res       Date:  2020-06-08       Impact factor: 2.192

Review 2.  Sniffing out causes of gastrointestinal disorders: a review of volatile metabolomic biomarkers.

Authors:  Iftikhar Ahmed; Zafar Niaz; Frederick Ewbank; Danyal Akarca; Richard Felwick; Manuele Furnari
Journal:  Biomark Med       Date:  2018-09-07       Impact factor: 2.851

Review 3.  The science and necessity of using animal models in the study of necrotizing enterocolitis.

Authors:  Guillermo J Ares; Steven J McElroy; Catherine J Hunter
Journal:  Semin Pediatr Surg       Date:  2017-11-06       Impact factor: 2.754

4.  Reduced incidence of necrotizing enterocolitis associated with enteral administration of Lactobacillus acidophilus and Bifidobacterium infantis to neonates in an intensive care unit.

Authors:  A B Hoyos
Journal:  Int J Infect Dis       Date:  1999       Impact factor: 3.623

5.  Analysis of faecal volatile organic compounds in preterm infants who develop necrotising enterocolitis: a pilot study.

Authors:  Catherine E Garner; Andrew K Ewer; Kalifa Elasouad; Francis Power; Rosemary Greenwood; Norman M Ratcliffe; Ben de Lacy Costello; Chris S Probert
Journal:  J Pediatr Gastroenterol Nutr       Date:  2009-11       Impact factor: 2.839

Review 6.  Necrotizing enterocolitis: new insights into pathogenesis and mechanisms.

Authors:  Diego F Niño; Chhinder P Sodhi; David J Hackam
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2016-08-18       Impact factor: 46.802

7.  Longitudinal analysis of the premature infant intestinal microbiome prior to necrotizing enterocolitis: a case-control study.

Authors:  Yanjiao Zhou; Gururaj Shan; Erica Sodergren; George Weinstock; W Allan Walker; Katherine E Gregory
Journal:  PLoS One       Date:  2015-03-05       Impact factor: 3.240

8.  16S rRNA gene-based analysis of fecal microbiota from preterm infants with and without necrotizing enterocolitis.

Authors:  Yunwei Wang; Jeanette D Hoenig; Kathryn J Malin; Sanaa Qamar; Elaine O Petrof; Jun Sun; Dionysios A Antonopoulos; Eugene B Chang; Erika C Claud
Journal:  ISME J       Date:  2009-04-16       Impact factor: 10.302

9.  Optimized Sampling Conditions for Fecal Volatile Organic Compound Analysis by Means of Field Asymmetric Ion Mobility Spectrometry.

Authors:  Sofie Bosch; Sofia El Manouni El Hassani; James A Covington; Alfian N Wicaksono; Marije K Bomers; Marc A Benninga; Chris J J Mulder; Nanne K H de Boer; Tim G J de Meij
Journal:  Anal Chem       Date:  2018-06-15       Impact factor: 6.986

10.  Meta-analysis of effects of exclusive breastfeeding on infant gut microbiota across populations.

Authors:  Nhan T Ho; Fan Li; Kathleen A Lee-Sarwar; Hein M Tun; Bryan P Brown; Pia S Pannaraj; Jeffrey M Bender; Meghan B Azad; Amanda L Thompson; Scott T Weiss; M Andrea Azcarate-Peril; Augusto A Litonjua; Anita L Kozyrskyj; Heather B Jaspan; Grace M Aldrovandi; Louise Kuhn
Journal:  Nat Commun       Date:  2018-10-09       Impact factor: 14.919

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  2 in total

1.  Neonatal Microbiome, Intestinal Inflammation, and Necrotizing Enterocolitis.

Authors:  Kathryn Y Burge; Troy A Markel
Journal:  Microorganisms       Date:  2022-07-09

Review 2.  Emerging prediction methods for early diagnosis of necrotizing enterocolitis.

Authors:  Siyuan Wu; Sijia Di; Tianjing Liu; Yongyan Shi
Journal:  Front Med (Lausanne)       Date:  2022-09-16
  2 in total

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