Literature DB >> 33742103

A single donor is sufficient to produce a highly functional in vitro antibody library.

M Frank Erasmus1, Sara D'Angelo1, Fortunato Ferrara1, Leslie Naranjo1, André A Teixeira2, Rebecca Buonpane3, Shaun M Stewart3, Horacio G Nastri3, Andrew R M Bradbury4.   

Abstract

Antibody complementarity determining region diversity has been considered to be the most important metric for the production of a functional antibody library. Generally, the greater the antibody library diversity, the greater the probability of selecting a diverse array of high affinity leads. According to this paradigm, the primary means of elevating library diversity has been by increasing the number of donors. In the present study we explored the possibility of creating an in vitro antibody library from a single healthy individual, showing that the number of lymphocytes, rather than the number of donors, is the key criterion in the production of a diverse and functional antibody library. We describe the construction of a high-quality phage display library comprising 5 × 109 human antibodies by applying an efficient B cell extraction protocol from a single donor and a targeted V-gene amplification strategy favoring specific antibody families for their improved developability profiles. Each step of the library generation process was followed and validated by next generation sequencing to monitor the library quality and diversity. The functionality of the library was tested using several therapeutically relevant targets for which a vast number of different antibodies with desired biophysical properties were obtained.

Entities:  

Year:  2021        PMID: 33742103      PMCID: PMC7979914          DOI: 10.1038/s42003-021-01881-0

Source DB:  PubMed          Journal:  Commun Biol        ISSN: 2399-3642


  103 in total

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Authors:  David O'Connell; Baltazar Becerril; Arup Roy-Burman; Mike Daws; James D Marks
Journal:  J Mol Biol       Date:  2002-08-02       Impact factor: 5.469

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Journal:  Nature       Date:  1990-12-06       Impact factor: 49.962

Review 3.  Bioinformatic and Statistical Analysis of Adaptive Immune Repertoires.

Authors:  Victor Greiff; Enkelejda Miho; Ulrike Menzel; Sai T Reddy
Journal:  Trends Immunol       Date:  2015-10-25       Impact factor: 16.687

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Authors:  F Matsuda; T Honjo
Journal:  Adv Immunol       Date:  1996       Impact factor: 3.543

5.  HuCAL PLATINUM, a synthetic Fab library optimized for sequence diversity and superior performance in mammalian expression systems.

Authors:  Josef Prassler; Stefanie Thiel; Catrin Pracht; Andrea Polzer; Solveig Peters; Marion Bauer; Stephanie Nörenberg; Yvonne Stark; Johanna Kölln; Andreas Popp; Stefanie Urlinger; Markus Enzelberger
Journal:  J Mol Biol       Date:  2011-08-12       Impact factor: 5.469

6.  Isolation of human monoclonal antibodies by mammalian cell display.

Authors:  Roger R Beerli; Monika Bauer; Regula B Buser; Myriam Gwerder; Simone Muntwiler; Patrik Maurer; Philippe Saudan; Martin F Bachmann
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-23       Impact factor: 11.205

7.  The human combinatorial antibody library HuCAL GOLD combines diversification of all six CDRs according to the natural immune system with a novel display method for efficient selection of high-affinity antibodies.

Authors:  Christine Rothe; Stefanie Urlinger; Corinna Löhning; Josef Prassler; Yvonne Stark; Ute Jäger; Bernd Hubner; Michael Bardroff; Ingrid Pradel; Melanie Boss; Renate Bittlingmaier; Tschimegma Bataa; Christian Frisch; Bodo Brocks; Annemarie Honegger; Margit Urban
Journal:  J Mol Biol       Date:  2007-12-15       Impact factor: 5.469

8.  The restricted DH gene reading frame usage in the expressed human antibody repertoire is selected based upon its amino acid content.

Authors:  Jennifer Benichou; Jacob Glanville; Eline T Luning Prak; Roy Azran; Tracy C Kuo; Jaume Pons; Cindy Desmarais; Lea Tsaban; Yoram Louzoun
Journal:  J Immunol       Date:  2013-04-29       Impact factor: 5.422

9.  Individual variation in the germline Ig gene repertoire inferred from variable region gene rearrangements.

Authors:  Scott D Boyd; Bruno A Gaëta; Katherine J Jackson; Andrew Z Fire; Eleanor L Marshall; Jason D Merker; Jay M Maniar; Lyndon N Zhang; Bita Sahaf; Carol D Jones; Birgitte B Simen; Bozena Hanczaruk; Khoa D Nguyen; Kari C Nadeau; Michael Egholm; David B Miklos; James L Zehnder; Andrew M Collins
Journal:  J Immunol       Date:  2010-05-21       Impact factor: 5.422

10.  Many Routes to an Antibody Heavy-Chain CDR3: Necessary, Yet Insufficient, for Specific Binding.

Authors:  Sara D'Angelo; Fortunato Ferrara; Leslie Naranjo; M Frank Erasmus; Peter Hraber; Andrew R M Bradbury
Journal:  Front Immunol       Date:  2018-03-08       Impact factor: 7.561

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  6 in total

Review 1.  Progress and challenges for the machine learning-based design of fit-for-purpose monoclonal antibodies.

Authors:  Rahmad Akbar; Habib Bashour; Puneet Rawat; Philippe A Robert; Eva Smorodina; Tudor-Stefan Cotet; Karine Flem-Karlsen; Robert Frank; Brij Bhushan Mehta; Mai Ha Vu; Talip Zengin; Jose Gutierrez-Marcos; Fridtjof Lund-Johansen; Jan Terje Andersen; Victor Greiff
Journal:  MAbs       Date:  2022 Jan-Dec       Impact factor: 5.857

2.  Healthy humans can be a source of antibodies countering COVID-19.

Authors:  Nileena Velappan; Hau B Nguyen; Sofiya Micheva-Viteva; Daniel Bedinger; Chunyan Ye; Betty Mangadu; Austin J Watts; Robert Meagher; Steven Bradfute; Bin Hu; Geoffrey S Waldo; Antonietta M Lillo
Journal:  Bioengineered       Date:  2022-05       Impact factor: 6.832

Review 3.  Current advances in biopharmaceutical informatics: guidelines, impact and challenges in the computational developability assessment of antibody therapeutics.

Authors:  Rahul Khetan; Robin Curtis; Charlotte M Deane; Johannes Thorling Hadsund; Uddipan Kar; Konrad Krawczyk; Daisuke Kuroda; Sarah A Robinson; Pietro Sormanni; Kouhei Tsumoto; Jim Warwicker; Andrew C R Martin
Journal:  MAbs       Date:  2022 Jan-Dec       Impact factor: 5.857

4.  Drug-like antibodies with high affinity, diversity and developability directly from next-generation antibody libraries.

Authors:  Andre Azevedo Reis Teixeira; Michael Frank Erasmus; Sara D'Angelo; Leslie Naranjo; Fortunato Ferrara; Camila Leal-Lopes; Oliver Durrant; Cecile Galmiche; Aleardo Morelli; Anthony Scott-Tucker; Andrew Raymon Morton Bradbury
Journal:  MAbs       Date:  2021 Jan-Dec       Impact factor: 5.857

5.  Construction of a Large Size Human Immunoglobulin Heavy Chain Variable (VH) Domain Library, Isolation and Characterization of Novel Human Antibody VH Domains Targeting PD-L1 and CD22.

Authors:  Zehua Sun; Wei Li; John W Mellors; Rimas Orentas; Dimiter S Dimitrov
Journal:  Front Immunol       Date:  2022-04-06       Impact factor: 8.786

6.  Simultaneous affinity maturation and developability enhancement using natural liability-free CDRs.

Authors:  Andre A R Teixeira; Sara D'Angelo; M Frank Erasmus; Camila Leal-Lopes; Fortunato Ferrara; Laura P Spector; Leslie Naranjo; Esteban Molina; Tamara Max; Ashley DeAguero; Katherine Perea; Shaun Stewart; Rebecca A Buonpane; Horacio G Nastri; Andrew R M Bradbury
Journal:  MAbs       Date:  2022 Jan-Dec       Impact factor: 6.440

  6 in total

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