Literature DB >> 33737626

Transcriptome of rhesus macaque (Macaca mulatta) exposed to total-body irradiation.

Yaoxiang Li1, Jatinder Singh2,3, Rency Varghese1, Yubo Zhang4, Oluseyi O Fatanmi2,3, Amrita K Cheema1,5, Vijay K Singh6,7.   

Abstract

The field of biodosimetry has seen a paradigm shift towards an increased use of molecular phenotyping technologies including omics and miRNA, in addition to conventional cytogenetic techniques. Here, we have used a nonhuman primate (NHP) model to study the impact of gamma-irradiation on alterations in blood-based gene expression. With a goal to delineate radiation induced changes in gene expression, we followed eight NHPs for 60 days after exposure to 6.5 Gy gamma-radiation for survival outcomes. Analysis of differential gene expression in response to radiation exposure yielded 26,944 dysregulated genes that were not significantly impacted by sex. Further analysis showed an increased association of several pathways including IL-3 signaling, ephrin receptor signaling, ErbB signaling, nitric oxide signaling in the cardiovascular system, Wnt/β-catenin signaling, and inflammasome pathway, which were associated with positive survival outcomes in NHPs after acute exposure to radiation. This study provides novel insights into major pathways and networks involved in radiation-induced injuries that may identify biomarkers for radiation injury.

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Year:  2021        PMID: 33737626      PMCID: PMC7973550          DOI: 10.1038/s41598-021-85669-6

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.996


  40 in total

1.  Biomarkers for acute radiation syndrome: challenges for developing radiation countermeasures following animal rule.

Authors:  Vijay K Singh; Madison Simas; Harvey Pollard
Journal:  Expert Rev Mol Diagn       Date:  2018-10-11       Impact factor: 5.225

Review 2.  Metabolomic applications in radiation biodosimetry: exploring radiation effects through small molecules.

Authors:  Evan L Pannkuk; Albert J Fornace; Evagelia C Laiakis
Journal:  Int J Radiat Biol       Date:  2017-01-12       Impact factor: 2.694

Review 3.  A review of radiation countermeasures focusing on injury-specific medicinals and regulatory approval status: part I. Radiation sub-syndromes, animal models and FDA-approved countermeasures.

Authors:  Vijay K Singh; Thomas M Seed
Journal:  Int J Radiat Biol       Date:  2017-06-26       Impact factor: 2.694

Review 4.  State-of-the-Art Advances in Radiation Biodosimetry for Mass Casualty Events Involving Radiation Exposure.

Authors:  Mary Sproull; Kevin Camphausen
Journal:  Radiat Res       Date:  2016-10-06       Impact factor: 2.841

5.  Exposure to Ionizing Radiation Causes Endoplasmic Reticulum Stress in the Mouse Hippocampus.

Authors:  Charles P Hinzman; Janet E Baulch; Khyati Y Mehta; Kirandeep Gill; Charles L Limoli; Amrita K Cheema
Journal:  Radiat Res       Date:  2018-08-07       Impact factor: 2.841

Review 6.  Reported radiation overexposure accidents worldwide, 1980-2013: a systematic review.

Authors:  Karen Coeytaux; Eric Bey; Doran Christensen; Erik S Glassman; Becky Murdock; Christelle Doucet
Journal:  PLoS One       Date:  2015-03-19       Impact factor: 3.240

7.  Pre-Exposure Gene Expression in Baboons with and without Pancytopenia after Radiation Exposure.

Authors:  Matthias Port; Francis Hérodin; Marco Valente; Michel Drouet; Reinhard Ullmann; Matthäus Majewski; Michael Abend
Journal:  Int J Mol Sci       Date:  2017-03-02       Impact factor: 5.923

8.  The R package Rsubread is easier, faster, cheaper and better for alignment and quantification of RNA sequencing reads.

Authors:  Yang Liao; Gordon K Smyth; Wei Shi
Journal:  Nucleic Acids Res       Date:  2019-05-07       Impact factor: 16.971

9.  Plasma-derived extracellular vesicles yield predictive markers of cranial irradiation exposure in mice.

Authors:  Charles P Hinzman; Janet E Baulch; Khyati Y Mehta; Michael Girgis; Shivani Bansal; Kirandeep Gill; Yaoxiang Li; Charles L Limoli; Amrita K Cheema
Journal:  Sci Rep       Date:  2019-07-01       Impact factor: 4.379

Review 10.  Use of biomarkers for assessing radiation injury and efficacy of countermeasures.

Authors:  Vijay K Singh; Victoria L Newman; Patricia Lp Romaine; Martin Hauer-Jensen; Harvey B Pollard
Journal:  Expert Rev Mol Diagn       Date:  2015-12-08       Impact factor: 5.225

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  3 in total

1.  Serum RNA biomarkers for predicting survival in non-human primates following thoracic radiation.

Authors:  Jared M May; Uma Shankavaram; Michelle A Bylicky; Sunita Chopra; Kevin Scott; Shannon Martello; Karla Thrall; Jim Axtelle; Naresh Menon; C Norman Coleman; Molykutty J Aryankalayil
Journal:  Sci Rep       Date:  2022-07-19       Impact factor: 4.996

2.  Pharmacokinetic and metabolomic studies with a BIO 300 Oral Powder formulation in nonhuman primates.

Authors:  Yaoxiang Li; Michael Girgis; Meth Jayatilake; Artur A Serebrenik; Amrita K Cheema; Michael D Kaytor; Vijay K Singh
Journal:  Sci Rep       Date:  2022-08-05       Impact factor: 4.996

3.  Lung transcriptome of nonhuman primates exposed to total- and partial-body irradiation.

Authors:  Neetha Nanoth Vellichirammal; Sahil Sethi; Sanjit Pandey; Jatinder Singh; Stephen Y Wise; Alana D Carpenter; Oluseyi O Fatanmi; Chittibabu Guda; Vijay K Singh
Journal:  Mol Ther Nucleic Acids       Date:  2022-08-04       Impact factor: 10.183

  3 in total

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