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Literature DB >> 33737359

Complete Genome Sequence of Pseudoalteromonas sp. Strain LC2018020214, a Bacterium Isolated from Natural Seawater.

Pish Wattanadilokchatkun^1,2, Pattanapon Kayansamruaj², Jiao Pan³.

Abstract

Pseudoalteromonas is a genus widely distributed in the ocean and displays antibacterial and antifouling activities. We isolated a Pseudoalteromonas sp. strain (LC2018020214) from coastal water of Qingdao, China, and assembled its complete genome. The genome consists of two circular chromosomes with lengths of 3,700,777 bp and 817,517 bp, respectively, and 3,866 coding sequences.

Entities: Chemical Species

Year: 2021 PMID： 33737359 PMCID： PMC7975877 DOI： 10.1128/MRA.00075-21

Source DB: PubMed Journal: Microbiol Resour Announc ISSN： 2576-098X

14 in total

1. Marine Pseudoalteromonas species are associated with higher organisms and produce biologically active extracellular agents.

Authors:
Journal: FEMS Microbiol Ecol Date: 1999-12-01 Impact factor: 4.194

2. Isolation and phylogenetic analysis of bacteria with antimicrobial activities from the Mediterranean sponges Aplysina aerophoba and Aplysina cavernicola.

Authors: U Hentschel; M Schmid; M Wagner; L Fieseler; C Gernert; J Hacker
Journal: FEMS Microbiol Ecol Date: 2001-05 Impact factor: 4.194

3. BUSCO: Assessing Genome Assembly and Annotation Completeness.

Authors: Mathieu Seppey; Mosè Manni; Evgeny M Zdobnov
Journal: Methods Mol Biol Date: 2019

4. Antibacterial activity of Pseudoalteromonas in the coral holobiont.

Authors: Maya Shnit-Orland; Alex Sivan; Ariel Kushmaro
Journal: Microb Ecol Date: 2012-07-06 Impact factor: 4.552

Review 5. Spotlight on Antimicrobial Metabolites from the Marine Bacteria Pseudoalteromonas: Chemodiversity and Ecological Significance.

Authors: Clément Offret; Florie Desriac; Patrick Le Chevalier; Jérôme Mounier; Camille Jégou; Yannick Fleury
Journal: Mar Drugs Date: 2016-07-08 Impact factor: 5.118

Complete Genome Sequence of Pseudoalteromonas sp. Strain LC2018020214, a Bacterium Isolated from Natural Seawater.

1. Marine Pseudoalteromonas species are associated with higher organisms and produce biologically active extracellular agents.

2. Isolation and phylogenetic analysis of bacteria with antimicrobial activities from the Mediterranean sponges Aplysina aerophoba and Aplysina cavernicola.

3. BUSCO: Assessing Genome Assembly and Annotation Completeness.

4. Antibacterial activity of Pseudoalteromonas in the coral holobiont.

Review 5. Spotlight on Antimicrobial Metabolites from the Marine Bacteria Pseudoalteromonas: Chemodiversity and Ecological Significance.

6. Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.

Review 7. Biosynthesis and Bioactivity of Prodiginine Analogs in Marine Bacteria, Pseudoalteromonas: A Mini Review.

8. Bioactive compound synthetic capacity and ecological significance of marine bacterial genus pseudoalteromonas.

9. NCBI prokaryotic genome annotation pipeline.

10. NanoPack: visualizing and processing long-read sequencing data.