Literature DB >> 33737357

Complete Genome Sequences of Three Uropathogenic Klebsiella quasipneumoniae Strains Isolated from Postmenopausal Women with Recurrent Urinary Tract Infection.

Sundharamani Venkitapathi1, Belle M Sharon1, Tahira A Ratna1, Amanda P Arute1, Philippe E Zimmern2, Nicole J De Nisco3.   

Abstract

Recurrent urinary tract infection (rUTI) poses a major health issue, especially among postmenopausal women. We report complete genome sequences of three Klebsiella quasipneumoniae strains isolated from the urine of postmenopausal women with rUTI. K. quasipneumoniae is a recently identified Klebsiella species with clinical and virulence characteristics distinct from those of K. pneumoniae.
Copyright © 2021 Venkitapathi et al.

Entities:  

Year:  2021        PMID： 33737357      PMCID： PMC7975875          DOI： 10.1128/MRA.00073-21

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  22 in total

1.  Description of Klebsiella quasipneumoniae sp. nov., isolated from human infections, with two subspecies, Klebsiella quasipneumoniae subsp. quasipneumoniae subsp. nov. and Klebsiella quasipneumoniae subsp. similipneumoniae subsp. nov., and demonstration that Klebsiella singaporensis is a junior heterotypic synonym of Klebsiella variicola.

Authors:  Sylvain Brisse; Virginie Passet; Patrick A D Grimont
Journal:  Int J Syst Evol Microbiol       Date:  2014-06-23       Impact factor: 2.747

2.  PlasmidFinder and In Silico pMLST: Identification and Typing of Plasmid Replicons in Whole-Genome Sequencing (WGS).

Authors:  Alessandra Carattoli; Henrik Hasman
Journal:  Methods Mol Biol       Date:  2020

3.  A one-step multiplex PCR to identify Klebsiella pneumoniae, Klebsiella variicola, and Klebsiella quasipneumoniae in the clinical routine.

Authors:  Erica Lourenço Fonseca; Nilceia da Veiga Ramos; Bruno G Nascimento Andrade; Lena L C S Morais; Michel F Abanto Marin; Ana Carolina P Vicente
Journal:  Diagn Microbiol Infect Dis       Date:  2017-01-17       Impact factor: 2.803

Review 4.  Direct Detection of Tissue-Resident Bacteria and Chronic Inflammation in the Bladder Wall of Postmenopausal Women with Recurrent Urinary Tract Infection.

Authors:  Nicole J De Nisco; Michael Neugent; Jason Mull; Luming Chen; Amy Kuprasertkul; Marcela de Souza Santos; Kelli L Palmer; Philippe Zimmern; Kim Orth
Journal:  J Mol Biol       Date:  2019-04-17       Impact factor: 5.469

5.  Bandage: interactive visualization of de novo genome assemblies.

Authors:  Ryan R Wick; Mark B Schultz; Justin Zobel; Kathryn E Holt
Journal:  Bioinformatics       Date:  2015-06-22       Impact factor: 6.937

6.  Fast and accurate de novo genome assembly from long uncorrected reads.

Authors:  Robert Vaser; Ivan Sović; Niranjan Nagarajan; Mile Šikić
Journal:  Genome Res       Date:  2017-01-18       Impact factor: 9.043

7.  gVolante for standardizing completeness assessment of genome and transcriptome assemblies.

Authors:  Osamu Nishimura; Yuichiro Hara; Shigehiro Kuraku
Journal:  Bioinformatics       Date:  2017-11-15       Impact factor: 6.937

8.  NCBI prokaryotic genome annotation pipeline.

Authors:  Tatiana Tatusova; Michael DiCuccio; Azat Badretdin; Vyacheslav Chetvernin; Eric P Nawrocki; Leonid Zaslavsky; Alexandre Lomsadze; Kim D Pruitt; Mark Borodovsky; James Ostell
Journal:  Nucleic Acids Res       Date:  2016-06-24       Impact factor: 16.971

9.  NanoPack: visualizing and processing long-read sequencing data.

Authors:  Wouter De Coster; Svenn D'Hert; Darrin T Schultz; Marc Cruts; Christine Van Broeckhoven
Journal:  Bioinformatics       Date:  2018-08-01       Impact factor: 6.937

10.  Urinary tract infection with Klebsiella pneumoniae in Patients with Chronic Kidney Disease.

Authors:  Oana Mariana Cristea; Carmen Silvia Avrămescu; Maria Bălășoiu; F D Popescu; Florica Popescu; M O Amzoiu
Journal:  Curr Health Sci J       Date:  2017-06-29
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  1 in total

1.  Conserved FimK Truncation Coincides with Increased Expression of Type 3 Fimbriae and Cultured Bladder Epithelial Cell Association in Klebsiella quasipneumoniae.

Authors:  Sundharamani Venkitapathi; Yalini H Wijesundara; Samuel A Cornelius; Fabian C Herbert; Jeremiah J Gassensmith; Philippe E Zimmern; Nicole J De Nisco
Journal:  J Bacteriol       Date:  2022-08-25       Impact factor: 3.476
  1 in total

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