Literature DB >> 33737351

Draft Genome Sequences of 19 Clinical stx-Harboring Escherichia coli O80:H2 Strains.

Marc J A Stevens1, Nicole Cernela1, Andrea Müller1,2, Magdalena Nüesch-Inderbinen1,2, Roger Stephan3.   

Abstract

Shiga toxin-producing Escherichia coli (STEC) O80:H2 is an uncommon hybrid pathotype that has emerged in Switzerland and France. Here, we report the draft genome sequences of 19 stx-harboring Escherichia coli O80:H2 strains isolated between 2003 and 2019 from patients in Switzerland.
Copyright © 2021 Stevens et al.

Entities:  

Year:  2021        PMID： 33737351      PMCID： PMC7975869          DOI： 10.1128/MRA.00033-21

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  10 in total

1.  SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.

Authors:  Anton Bankevich; Sergey Nurk; Dmitry Antipov; Alexey A Gurevich; Mikhail Dvorkin; Alexander S Kulikov; Valery M Lesin; Sergey I Nikolenko; Son Pham; Andrey D Prjibelski; Alexey V Pyshkin; Alexander V Sirotkin; Nikolay Vyahhi; Glenn Tesler; Max A Alekseyev; Pavel A Pevzner
Journal:  J Comput Biol       Date:  2012-04-16       Impact factor: 1.479

2.  Genetic characterization of Shiga toxin producing Escherichia coli belonging to the emerging hybrid pathotype O80:H2 isolated from humans 2010-2017 in Switzerland.

Authors:  Magdalena Nüesch-Inderbinen; Nicole Cernela; Daniel Wüthrich; Adrian Egli; Roger Stephan
Journal:  Int J Med Microbiol       Date:  2018-06-01       Impact factor: 3.473

Review 3.  Enterohaemorrhagic Escherichia coli in human medicine.

Authors:  Helge Karch; Phillip I Tarr; Martina Bielaszewska
Journal:  Int J Med Microbiol       Date:  2005-10       Impact factor: 3.473

4.  Real-time whole-genome sequencing for routine typing, surveillance, and outbreak detection of verotoxigenic Escherichia coli.

Authors:  Katrine Grimstrup Joensen; Flemming Scheutz; Ole Lund; Henrik Hasman; Rolf S Kaas; Eva M Nielsen; Frank M Aarestrup
Journal:  J Clin Microbiol       Date:  2014-02-26       Impact factor: 5.948

5.  The plasmid of Escherichia coli strain S88 (O45:K1:H7) that causes neonatal meningitis is closely related to avian pathogenic E. coli plasmids and is associated with high-level bacteremia in a neonatal rat meningitis model.

Authors:  Chantal Peigne; Philippe Bidet; Farah Mahjoub-Messai; Céline Plainvert; Valérie Barbe; Claudine Médigue; Eric Frapy; Xavier Nassif; Erick Denamur; Edouard Bingen; Stéphane Bonacorsi
Journal:  Infect Immun       Date:  2009-03-23       Impact factor: 3.441

6.  BIGSdb: Scalable analysis of bacterial genome variation at the population level.

Authors:  Keith A Jolley; Martin C J Maiden
Journal:  BMC Bioinformatics       Date:  2010-12-10       Impact factor: 3.169

7.  Haemolytic-uraemic syndrome with bacteraemia caused by a new hybrid Escherichia coli pathotype.

Authors:  P Mariani-Kurkdjian; C Lemaître; P Bidet; D Perez; L Boggini; T Kwon; S Bonacorsi
Journal:  New Microbes New Infect       Date:  2014-05-27

8.  Enterohemorrhagic Escherichia coli Hybrid Pathotype O80:H2 as a New Therapeutic Challenge.

Authors:  Nurcan Soysal; Patricia Mariani-Kurkdjian; Yasmine Smail; Sandrine Liguori; Malika Gouali; Estelle Loukiadis; Patrick Fach; Mathias Bruyand; Jorge Blanco; Philippe Bidet; Stéphane Bonacorsi
Journal:  Emerg Infect Dis       Date:  2016-09       Impact factor: 6.883

9.  Unusual severe case of hemolytic uremic syndrome due to Shiga toxin 2d-producing E. coli O80:H2.

Authors:  Kioa L Wijnsma; Anne M Schijvens; John W A Rossen; A M D Mirjam Kooistra-Smid; Michiel F Schreuder; Nicole C A J van de Kar
Journal:  Pediatr Nephrol       Date:  2017-03-25       Impact factor: 3.714

10.  NCBI prokaryotic genome annotation pipeline.

Authors:  Tatiana Tatusova; Michael DiCuccio; Azat Badretdin; Vyacheslav Chetvernin; Eric P Nawrocki; Leonid Zaslavsky; Alexandre Lomsadze; Kim D Pruitt; Mark Borodovsky; James Ostell
Journal:  Nucleic Acids Res       Date:  2016-06-24       Impact factor: 16.971
  10 in total

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