| Literature DB >> 33734613 |
Li-Xiang Yu1,2, Li-Yuan Liu1,2, Yu-Juan Xiang1,2, Fei Wang1,2, Fei Zhou1,2, Shu-Ya Huang1,2, Chao Zheng1,2, Chun-Miao Ye1,2, Wen-Zhong Zhou1,2, Geng-Shen Yin1,2, Jia-Lin Zhang1,2, Shu-De Cui3, Fu-Guo Tian4, Zhi-Min Fan5, Cui-Zhi Geng6, Xu-Chen Cao7, Zhen-Lin Yang8, Xiang Wang9, Hong Liang10, Shu Wang11, Hong-Chuan Jiang12, Xue-Ning Duan13, Hai-Bo Wang14, Guo-Lou Li15, Qi-Tang Wang16, Jian-Guo Zhang17, Feng Jin18, Jin-Hai Tang19, Liang Li20, Shi-Guang Zhu21, Wen-Shu Zuo22, Zhong-Bing Ma1,2, Zhi-Gang Yu1,2.
Abstract
BACKGROUND: X-ray repair cross-complementary 5 (XRCC5) and 6 (XRCC6) are critical for DNA repair. Few studies have assessed their association with breast cancer risk, and related gene-environment interactions remain poorly understood. This study aimed to determine the influence of XRCC5/6 polymorphisms on breast cancer risk, and their interactions with cigarette smoking, alcohol consumption, and sleep satisfaction.Entities:
Keywords: zzm321990XRCC5zzm321990; zzm321990XRCC6zzm321990; alcohol consumption; breast cancer; gene-environment interaction; sleep satisfaction; smoking
Year: 2021 PMID: 33734613 PMCID: PMC8026916 DOI: 10.1002/cam4.3847
Source DB: PubMed Journal: Cancer Med ISSN: 2045-7634 Impact factor: 4.452
Distribution of target SNPs of XRCC5/6
| Gene | SNP IDs | Chromosome | Location in gene region | Base change | MAF |
|---|---|---|---|---|---|
|
| rs3835 | 2 | Intron variant | G > A | 0.206 |
|
| rs828907 | 2 | 2 KB upstream variant | G > T | 0.326 |
|
| rs16855458 | 2 | Intron variant | C > A | 0.149 |
|
| rs9288516 | 2 | Intron variant | T > A | 0.152 |
|
| rs2267437 | 22 | 2 KB upstream variant | C > G | 0.260 |
|
| rs5751131 | 22 | Intron variant | A > G | 0.107 |
Abbreviations: MAF, minor allele frequency; SNP, single‐nucleotide polymorphism.
Demographic and lifestyle characteristics of the participants
| Variable | Control, | Case, |
|
|
|---|---|---|---|---|
| Age, y | ||||
| 25–44 | 440 (42.3) | 392 (37.7) | 5.75 | 0.057 |
| 45–59 | 523 (50.3) | 550 (52.9) | ||
| 60–70 | 77 (7.4) | 97 (9.3) | ||
| BMI | 10.00 | 0.007 | ||
| <24 | 515 (51.0) | 481 (48.1) | ||
| 24–27.9 | 407 (40.3) | 388 (38.8) | ||
| ≥28 | 88 (8.7) | 131 (13.1) | ||
| Menstrual status | 9.00 | 0.003 | ||
| Premenopausal | 724 (72.5) | 667 (66.4) | ||
| Postmenopausal | 274 (27.5) | 338 (33.6) | ||
| Family history of breast cancer | 4.13 | 0.042 | ||
| No | 995 (97.4) | 983 (95.7) | ||
| Yes | 27 (2.6) | 44 (4.3) | ||
| Smoking | ||||
| No | 1016 (98.1) | 1000 (96.6) | 4.22 | 0.040 |
| Yes | 20 (1.9) | 35 (3.4) | ||
| Alcohol consumption | 2.50 | 0.114 | ||
| No | 935 (90.3) | 910 (88.1) | ||
| Yes | 101 (9.7) | 123 (11.9) | ||
| Sleep satisfaction | 8.08 | 0.004 | ||
| Satisfied | 874 (85.9) | 829 (81.3) | ||
| Dissatisfied | 143 (14.1) | 191 (18.7) | ||
Abbreviations: BMI, body mass index.
The data were presented in the form of classified variables.
p value was calculated by the χ 2 test, and the p < 0.05 was statistically significant.
Genotype distribution of XRCC5/6 and breast cancer risk
| Genotype | Control, | Case, | OR (95%CI) |
| HWE |
|---|---|---|---|---|---|
|
| 0.173 | ||||
| GG | 855 (84.7) | 866 (85.6) | 1(ref) | ||
| GA | 151 (15.0) | 140 (13.8) | 0.93 (0.72–1.21) | 0.587 | |
| AA | 3 (0.3) | 6 (0.6) | 3.06 (0.61–15.27) | 0.173 | |
| GA + AA | 154 (15.3) | 146 (14.4) | 0.96 (0.74–1.24) | 0.756 | |
|
| 0.965 | ||||
|
| 0.056 | ||||
| GG | 636 (62.9) | 636 (62.9) | 1(ref) | ||
| GT | 344 (34.0) | 328 (32.4) | 0.92 (0.76–1.12) | 0.416 | |
| TT | 31 (3.1) | 47 (4.6) | 1.41 (0.87–2.29) | 0.159 | |
| GT + TT | 375 (37.1) | 375 (37.1) | 0.96 (0.80–1.17) | 0.708 | |
|
| 0.833 | ||||
|
| 0.287 | ||||
| CC | 652 (64.4) | 585 (57.8) | 1(ref) | ||
| CA | 328 (32.4) | 372 (36.8) | 1.24 (1.02–1.51) |
| |
| AA | 33 (3.3) | 55 (5.4) | 1.78 (1.12–2.82) |
| |
| CA + AA | 361 (35.6) | 427 (42.2) | 1.29 (1.07–1.56) |
| |
|
|
| ||||
|
| 0.488 | ||||
| TT | 276 (27.2) | 314 (30.9) | 1 (ref) | ||
| TA | 516 (50.9) | 485 (47.8) | 0.82 (0.66–1.02) | 0.072 | |
| AA | 221 (21.8) | 216 (21.3) | 0.87 (0.67–1.12) | 0.280 | |
| TA + AA | 737 (72.8) | 701 (69.1) | 0.84 (0.68–1.02) | 0.080 | |
|
| 0.222 | ||||
|
| 0.247 | ||||
| CC | 628 (61.9) | 623 (61.8) | 1 (ref) | ||
| CG | 332 (32.7) | 329 (32.6) | 1.03 (0.84–1.25) | 0.803 | |
| GG | 54 (5.3) | 56 (5.6) | 0.95 (0.64–1.43) | 0.818 | |
| CG + GG | 386 (38.1) | 385 (38.2) | 1.02 (0.84–1.22) | 0.879 | |
|
| 0.987 | ||||
|
| 0.251 | ||||
| AA | 341 (33.9) | 328 (33.1) | 1 (ref) | ||
| AG | 474 (47.1) | 490 (49.4) | 1.17 (0.95–1.44) | 0.134 | |
| GG | 191 (19.0) | 173 (17.5) | 0.97 (0.74–1.26) | 0.797 | |
| AG + GG | 665 (66.1) | 663 (66.9) | 1.11 (0.92–1.35) | 0.288 | |
|
| 0.878 |
Bold values indicate p < 0.05.
Abbreviations: CI, Confidence Interval; HWE, Hardy‐Weinberg equilibrium; OR, Odds Ratio; ref, reference.
Adjusted for age, BMI, menstrual status, and family history of breast cancer.
p value for Hardy‐Weinberg equilibrium.
p trend of the co–dominant inheritance patterns.
Associations between XRCC5/6 polymorphisms and risk of ER+/PR+, ER−/PR− breast cancer
| Genotype | Control, | ER+/PR+ | ER−/PR− | ||||
|---|---|---|---|---|---|---|---|
| Case, | OR (95%CI) |
| Case, | OR (95%CI) |
| ||
|
| |||||||
| GG | 855 (84.7) | 520 (86.5) | 1 (ref) | 171 (83.0) | 1 (ref) | ||
| GA | 151 (15.0) | 77 (12.8) | 0.89 (0.65–1.20) | 0.434 | 34 (16.5) | 1.17 (0.77–1.80) | 0.463 |
| AA | 3 (0.3) | 4 (0.7) | 3.46 (0.62–19.2) | 0.156 | 1 (0.5) | 2.98 (0.27–33.42) | 0.375 |
| GA + AA | 154 (15.3) | 81 (13.5) | 0.92 (0.68–1.24) | 0.589 | 35 (17.0) | 1.20 (0.79–1.82) | 0.404 |
|
| 0.796 | 0.350 | |||||
|
| |||||||
| GG | 636 (62.9) | 375 (62.3) | 1 (ref) | 129 (62.3) | 1 (ref) | ||
| GT | 344 (34.0) | 196 (32.6) | 0.92 (0.73–1.15) | 0.457 | 74 (35.7) | 1.02 (0.73–1.42) | 0.903 |
| TT | 31 (3.1) | 31 (5.1) | 1.52 (0.89–2.60) | 0.124 | 4 (1.9) | 0.49 (0.15–1.65) | 0.250 |
| GT + TT | 375 (37.1) | 227 (37.7) | 0.97 (0.78–1.21) | 0.783 | 78 (37.7) | 0.98 (0.70–1.35) | 0.880 |
|
| 0.733 | 0.616 | |||||
|
| |||||||
| CC | 652 (64.4) | 351 (58.1) | 1 (ref) | 125 (61.0) | 1 (ref) | ||
| CA | 328 (32.4) | 217 (35.9) | 1.23 (0.98–1.45) | 0.077 | 67 (32.7) | 1.08 (0.77–1.52) | 0.660 |
| AA | 33 (3.3) | 36 (6.0) | 1.84 (1.10–3.07) |
| 13 (6.3) | 2.25 (1.14–4.46) |
|
| CA + AA | 361 (35.6) | 253 (41.9) | 1.29 (1.04–1.60) |
| 89 (39.0) | 1.19 (0.86–1.65) | 0.294 |
|
|
| 0.089 | |||||
|
| |||||||
| TT | 276 (27.2) | 192 (31.7) | 1 (ref) | 63 (30.6) | 1 (ref) | ||
| TA | 516 (50.9) | 284 (46.9) | 0.79 (0.62–1.02) | 0.066 | 101 (49.0) | 0.81 (0.56–1.16) | 0.243 |
| AA | 221 (21.8) | 129 (21.3) | 0.85 (0.63–1.15) | 0.294 | 42 (20.4) | 0.79 (0.51–1.24) | 0.310 |
| TA + AA | 737 (72.8) | 413 (68.3) | 0.81 (0.64–1.02) | 0.076 | 143 (69.4) | 0.80 (0.57–1.13) | 0.204 |
|
| 0.230 | 0.273 | |||||
|
| |||||||
| CC | 628 (61.9) | 384 (63.8) | 1 (ref) | 107 (52.2) | 1 (ref) | ||
| CG | 332 (32.7) | 189 (31.4) | 0.95 (0.75–1.20) | 0.657 | 87 (42.4) | 1.66 (1.20–2.31) |
|
| GG | 54 (5.3) | 29 (4.8) | 0.87 (0.54–1.39) | 0.551 | 11 (5.4) | 0.89 (0.41–1.93) | 0.762 |
| CG + GG | 386 (38.1) | 218 (36.2) | 0.94 (0.75–1.17) | 0.556 | 98 (47.8) | 1.54 (1.12–2.13) |
|
|
| 0.496 | 0.063 | |||||
|
| |||||||
| AA | 341 (33.9) | 185 (31.6) | 1 (ref) | 73 (36.0) | 1 (ref) | ||
| AG | 474 (47.1) | 303 (51.7) | 1.24 (0.97–1.57) | 0.083 | 94 (46.3) | 1.07 (0.75–1.53) | 0.693 |
| GG | 191 (19.0) | 98 (16.7) | 0.96 (0.70–1.31) | 0.783 | 36 (17.7) | 0.90 (0.56–1.43) | 0.645 |
| AG + GG | 665 (66.1) | 401 (68.4) | 1.16 (0.92–1.45) | 0.214 | 130 (64.0) | 1.02 (0.73–1.43) | 0.900 |
|
| 0.839 | 0.765 | |||||
Bold values indicate p < 0.05.
Abbreviations: CI, Confidence Interval; ER, estrogen receptor; OR, Odds Ratio; PR, progesterone receptor; ref, reference.
Adjusted for age, BMI, menstrual status, and family history of breast cancer.
p trend of the co‐dominant inheritance patterns.
Interactions between XRCC5/6 polymorphisms and smoking, alcohol consumption, and sleep satisfaction in breast cancer risk
| Genotype | Exposure | Smoking | Alcohol consumption | Sleep satisfaction | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Control, | Case, | OR (95%CI) |
| Control, | Case, | OR (95%CI) |
| Control, | Case, | OR (95%CI) |
| ||
|
| |||||||||||||
| GG | (−) | 834 (83.0) | 833 (82.6) | 1 (ref) | 764 (76.0) | 764 (75.9) | 1 (ref) | 717 (72.5) | 694 (69.9) | 1 (ref) | |||
| GA + AA | (−) | 151 (15.0) | 141 (14.0) | 0.96 (0.74–1.24) | 0.743 | 145 (14.4) | 124 (12.3) | 0.89 (0.68–1.17) | 0.408 | 132 (13.3) | 113 (11.4) | 0.92 (0.69–1.22) | 0.550 |
| GG | (+) | 17 (1.7) | 29 (2.9) | 1.61 (0.87–2.97) | 0.131 | 87 (8.7) | 96 (9.5) | 1.12 (0.81–1.56) | 0.482 | 119 (12.0) | 154 (15.5) | 1.30 (0.98–1.71) | 0.068 |
| GA + AA | (+) | 3 (0.3) | 5 (0.5) | 1.64 (0.39–6.94) | 0.503 | 9 (0.9) | 22 (2.2) | 2.20 (0.98–4.91) | 0.055 | 21 (2.1) | 32 (3.2) | 1.50 (0.83–2.71) | 0.184 |
|
| 0.937 | 0.086 | 0.517 | ||||||||||
|
| |||||||||||||
| GG | (−) | 625 (62.1) | 610 (60.6) | 1 (ref) | 580 (57.6) | 563 (56.0) | 1 (ref) | 533 (53.9) | 521 (52.5) | 1 (ref) | |||
| GT + TT | (−) | 365 (36.2) | 362 (35.9) | 0.99 (0.81–1.20) | 0.894 | 326 (32.4) | 324 (32.2) | 1.01 (0.83–1.24) | 0.917 | 317 (32.1) | 283 (28.5) | 0.90 (0.73–1.11) | 0.338 |
| GG | (+) | 8 (0.8) | 23 (2.3) | 2.85 (1.26–6.45) | 0.012 | 52 (5.2) | 70 (7.0) | 1.47 (0.99–2.18) | 0.053 | 86 (8.7) | 104 (10.5) | 1.22 (0.88–1.70) | 0.230 |
| GT + TT | (+) | 9 (0.9) | 12 (1.2) | 1.18 (0.48–2.89) | 0.711 | 49 (4.9) | 49 (4.9) | 0.91 (0.58–1.43) | 0.690 | 52 (5.3) | 84 (8.5) | 1.46 (0.99–2.15) | 0.057 |
|
| 0.161 | 0.114 | 0.297 | ||||||||||
|
| |||||||||||||
| CC | (−) | 640 (63.4) | 566 (56.2) | 1 (ref) | 593 (58.8) | 501 (49.8) | 1 (ref) | 541 (54.6) | 462 (46.5) | 1 (ref) | |||
| CA + AA | (−) | 351 (34.8) | 407 (40.4) | 1.29 (1.06–1.56) |
| 317 (31.4) | 387 (38.5) | 1.41 (1.16–1.72) |
| 308 (31.1) | 343 (34.5) | 1.27 (1.03–1.56) |
|
| CC | (+) | 11 (1.1) | 18 (1.8) | 1.69 (0.78–3.66) | 0.180 | 57 (5.6) | 81 (8.1) | 1.63 (1.12–2.38) |
| 96 (9.7) | 111 (11.2) | 1.26 (0.92–1.73) | 0.157 |
| CA + AA | (+) | 7 (0.7) | 17 (1.7) | 2.65 (1.09–6.46) |
| 42 (4.2) | 37 (3.7) | 1.08 (0.66–1.75) | 0.769 | 45 (4.5) | 77 (7.8) | 1.91 (1.26–2.89) |
|
|
| 0.747 |
| 0.507 | ||||||||||
|
| |||||||||||||
| TT | (−) | 268 (26.6) | 299 (29.6) | 1 (ref) | 243 (24.1) | 273 (27.1) | 1 (ref) | 236 (23.8) | 249 (25.0) | 1 (ref) | |||
| TA + AA | (−) | 723 (71.7) | 677 (67.0) | 0.83 (0.68–1.02) | 0.080 | 665 (65.9) | 617 (61.1) | 0.80 (0.65–0.99) |
| 613 (61.9) | 559 (56.1) | 0.84 (0.67–1.04) | 0.115 |
| TT | (+) | 6 (0.6) | 13 (1.3) | 1.86 (0.69–5.00) | 0.217 | 33 (3.3) | 40 (4.0) | 0.92 (0.54–1.57) | 0.762 | 36 (3.6) | 60 (6.0) | 1.37 (0.84–2.23) | 0.204 |
| TA + AA | (+) | 12 (1.2) | 22 (2.2) | 1.52 (0.73–3.18) | 0.258 | 68 (6.7) | 79 (7.8) | 1.07 (0.54–1.57) | 0.729 | 105 (10.6) | 129 (12.9) | 1.10 (0.79–1.53) | 0.566 |
|
| 0.981 | 0.254 | 0.885 | ||||||||||
|
| |||||||||||||
| CC | (−) | 613 (60.7) | 599 (59.7) | 1 (ref) | 570 (56.4) | 541 (54.0) | 1 (ref) | 513 (51.8) | 499 (50.5) | 1 (ref) | |||
| CG + GG | (−) | 379 (37.5) | 371 (37.0) | 1.01 (0.83–1.22) | 0.900 | 341 (33.8) | 343 (34.2) | 1.06 (0.86–1.29) | 0.549 | 337 (34.0) | 302 (30.5) | 0.91 (0.74–1.12) | 0.392 |
| CC | (+) | 13 (1.3) | 21 (2.1) | 1.62 (0.80–3.28) | 0.179 | 56 (5.5) | 77 (7.7) | 1.40 (0.95–2.07) | 0.080 | 97 (9.8) | 116 (11.7) | 1.11 (0.81–1.52) | 0.537 |
| CG + GG | (+) | 5 (0.5) | 13 (1.3) | 2.41 (0.84–6.91) | 0.111 | 43 (4.3) | 41 (4.1) | 1.05 (0.66–1.66) | 0.844 | 44 (4.4) | 72 (7.3) | 1.72 (1.13–2.61) |
|
|
| 0.576 | 0.244 |
| ||||||||||
|
| |||||||||||||
| AA | (−) | 330 (32.9) | 316 (32.0) | 1 (ref) | 306 (30.5) | 288 (29.2) | 1 (ref) | 287 (29.1) | 261 (26.9) | 1 (ref) | |||
| AG + GG | (−) | 652 (65.1) | 639 (64.7) | 1.10 (0.90–1.34) | 0.361 | 599 (59.8) | 581 (58.9) | 1.11 (0.90–1.36) | 0.326 | 559 (56.7) | 528 (54.3) | 1.11 (0.90–1.38) | 0.333 |
| AA | (+) | 11 (1.1) | 12 (1.2) | 1.11 (0.48–2.56) | 0.814 | 34 (3.4) | 39 (4.0) | 1.25 (0.75–2.08) | 0.384 | 48 (4.9) | 62 (6.4) | 1.38 (0.89–2.13) | 0.153 |
| AG + GG | (+) | 9 (0.9) | 21 (2.1) | 2.44 (1.09–5.46) |
| 63 (6.3) | 78 (7.9) | 1.40 (0.94–2.07) | 0.097 | 92 (9.3) | 121 (12.4) | 1.47 (1.05–2.07) |
|
|
| 0.237 | 0.990 | 0.894 | ||||||||||
Bold values indicate p < 0.05.
Abbreviations: CI, confidence interval; OR, odds ratio.
Exposure for smoking: (−), no; (+), yes. Exposure for drinking: (−), no; (+), yes. Exposure for sleep satisfaction: (−), satisfied; (+), dissatisfied.
Adjusted for age, BMI, menstrual status, and family history of breast cancer.
p interaction was calculated by the test for multiplicative interaction.