Literature DB >> 33733305

Diversity of Fungi Present in Permafrost in the South Shetland Islands, Maritime Antarctic.

Thamar Holanda da Silva1, Paulo E A S Câmara2, Otávio Henrique Bezerra Pinto3, Micheline Carvalho-Silva2, Fábio Soares Oliveira4, Peter Convey5, Carlos Augusto Rosa1, Luiz Henrique Rosa6.   

Abstract

We assess the fungal diversity present in permafrost from different islands in the South Shetland Islands archipelago, maritime Antarctic, using next-generation sequencing (NGS). We detected 1,003,637 fungal DNA reads representing, in rank abundance order, the phyla Ascomycota, Mortierellomycota, Basidiomycota, Chytridiomycota, Rozellomycota, Mucoromycota, Calcarisporiellomycota and Zoopagomycota. Ten taxa were dominant these being, in order of abundance, Pseudogymnoascus appendiculatus, Penicillium sp., Pseudogymnoascus roseus, Penicillium herquei, Curvularia lunata, Leotiomycetes sp., Mortierella sp. 1, Mortierella fimbricystis, Fungal sp. 1 and Fungal sp. 2. A further 38 taxa had intermediate abundance and 345 were classified as rare. The total fungal community detected in the permafrost showed high indices of diversity, richness and dominance, although these varied between the sampling locations. The use of a metabarcoding approach revealed the presence of DNA of a complex fungal assemblage in the permafrost of the South Shetland Islands including taxa with a range of ecological functions among which were multiple animal, human and plant pathogenic fungi. Further studies are required to determine whether the taxa identified are present in the form of viable cells or propagules and which might be released from melting permafrost to other Antarctic habitats and potentially dispersed more widely.
© 2021. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Antarctica; Climate change; Frozen soil; Fungi; Metabarcoding

Mesh:

Substances:

Year:  2021        PMID: 33733305     DOI: 10.1007/s00248-021-01735-6

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  30 in total

1.  Ancient fungi in Antarctic permafrost environments.

Authors:  Galina Kochkina; Natalya Ivanushkina; Svetlana Ozerskaya; Nadezhda Chigineva; Oleg Vasilenko; Sergey Firsov; Elena Spirina; David Gilichinsky
Journal:  FEMS Microbiol Ecol       Date:  2012-07-23       Impact factor: 4.194

2.  Microbial populations in Antarctic permafrost: biodiversity, state, age, and implication for astrobiology.

Authors:  D A Gilichinsky; G S Wilson; E I Friedmann; C P McKay; R S Sletten; E M Rivkina; T A Vishnivetskaya; L G Erokhina; N E Ivanushkina; G A Kochkina; V A Shcherbakova; V S Soina; E V Spirina; E A Vorobyova; D G Fyodorov-Davydov; B Hallet; S M Ozerskaya; V A Sorokovikov; K S Laurinavichyus; A V Shatilovich; J P Chanton; V E Ostroumov; J M Tiedje
Journal:  Astrobiology       Date:  2007-04       Impact factor: 4.335

3.  Climate change drives expansion of Antarctic ice-free habitat.

Authors:  Jasmine R Lee; Ben Raymond; Thomas J Bracegirdle; Iadine Chadès; Richard A Fuller; Justine D Shaw; Aleks Terauds
Journal:  Nature       Date:  2017-06-28       Impact factor: 49.962

Review 4.  The influence of global climate change on the environmental fate of anthropogenic pollution released from the permafrost: Part I. Case study of Antarctica.

Authors:  Joanna Potapowicz; Danuta Szumińska; Małgorzata Szopińska; Żaneta Polkowska
Journal:  Sci Total Environ       Date:  2018-09-15       Impact factor: 7.963

5.  Comparative activity and functional ecology of permafrost soils and lithic niches in a hyper-arid polar desert.

Authors:  Jacqueline Goordial; Alfonso Davila; Charles W Greer; Rebecca Cannam; Jocelyne DiRuggiero; Christopher P McKay; Lyle G Whyte
Journal:  Environ Microbiol       Date:  2016-06-28       Impact factor: 5.491

6.  Diversity, distribution, and ecology of viable fungi in permafrost and active layer of Maritime Antarctica.

Authors:  Thamar Holanda da Silva; Débora Amorim Saraiva Silva; Fábio Soares de Oliveira; Carlos Ernesto Gonçalves Reynaud Schaefer; Carlos Augusto Rosa; Luiz Henrique Rosa
Journal:  Extremophiles       Date:  2020-05-13       Impact factor: 2.395

7.  Nearing the cold-arid limits of microbial life in permafrost of an upper dry valley, Antarctica.

Authors:  Jacqueline Goordial; Alfonso Davila; Denis Lacelle; Wayne Pollard; Margarita M Marinova; Charles W Greer; Jocelyn DiRuggiero; Christopher P McKay; Lyle G Whyte
Journal:  ISME J       Date:  2016-01-19       Impact factor: 10.302

Review 8.  Microbial ecology of the cryosphere (glacial and permafrost habitats): current knowledge.

Authors:  Rosa Margesin; Tony Collins
Journal:  Appl Microbiol Biotechnol       Date:  2019-02-05       Impact factor: 4.813

Review 9.  Antarctic environmental change and biological responses.

Authors:  Peter Convey; Lloyd S Peck
Journal:  Sci Adv       Date:  2019-11-27       Impact factor: 14.136

10.  Metagenome-assembled genome distribution and key functionality highlight importance of aerobic metabolism in Svalbard permafrost.

Authors:  Yaxin Xue; Inge Jonassen; Lise Øvreås; Neslihan Taş
Journal:  FEMS Microbiol Ecol       Date:  2020-05-01       Impact factor: 4.194

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  1 in total

Review 1.  Microbial Community Composition of the Antarctic Ecosystems: Review of the Bacteria, Fungi, and Archaea Identified through an NGS-Based Metagenomics Approach.

Authors:  Vesselin V Doytchinov; Svetoslav G Dimov
Journal:  Life (Basel)       Date:  2022-06-18
  1 in total

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