Literature DB >> 33730221

Bacterial diversity patterns of desert dunes in the northeastern Qinghai-Tibet Plateau, China.

Ali Bahadur1,2, Wei Zhang1,3, Wasim Sajjad2, Fahad Nasir4, Gaosen Zhang1,3, Guangxiu Liu1,3, Tuo Chen5.   

Abstract

Limited knowledge about the variation patterns of bacterial community composition in the sand and vegetative ecosystems confines our understanding regarding the contribution of the sand dune to desert areas. In this study, 454 pyrosequencing platforms were adopted to determine the community structure of bacteria and diversity of sand dunes in northeastern Qinghai-Tibet Plateau, China: 50 cm deep, rhizosphere, physical crusts, and biological crusts representing sand and vegetative ecosystems, respectively. The findings revealed significant variation in bacterial diversities and the structure of communities in the sand and vegetative ecosystems. The dominant bacterial phyla of sand and vegetative ecosystems were Firmicutes (47%), Actinobacteria (21%), Proteobacteria (16%), and Bacteroidetes (13%), while Lactococcus (50%) was found to be the dominant genus. Furthermore, samples with high alpha-diversity indices (Chao 1 and Shannon) for the vegetative ecosystem have the lowest modularity index and the largest number of biomarkers, with some exceptions. Redundancy analysis exhibited that environmental factors could explain 72% (phyla) and 67% (genera) of the bacterial communities, with EC, TC, and TOC being the major driving factors. This study expands our understanding of bacterial community composition in the desert ecosystem. The findings suggest that variations in the sand and vegetative ecosystems, such as those predicted by environmental factors, may reduce the abundance and diversity of bacteria, a response that likely affects the provision of key ecosystem processes by desert regions.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  454 pyrosequencing; Bacterial community; Desert land; Rhizospheric soil; Sand dunes; Soil physicochemical properties

Mesh:

Year:  2021        PMID: 33730221     DOI: 10.1007/s00203-021-02272-z

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  47 in total

1.  Changes in the root-associated fungal communities along a primary succession gradient analysed by 454 pyrosequencing.

Authors:  Rakel Blaalid; Tor Carlsen; Surendra Kumar; Rune Halvorsen; Karl Inne Ugland; Giovanni Fontana; Håvard Kauserud
Journal:  Mol Ecol       Date:  2012-04       Impact factor: 6.185

2.  Bacterial diversity of surface sand samples from the Gobi and Taklamaken deserts.

Authors:  Shu An; Cécile Couteau; Fan Luo; Julie Neveu; Michael S DuBow
Journal:  Microb Ecol       Date:  2013-08-22       Impact factor: 4.552

3.  Biogeography of soil archaea and bacteria along a steep precipitation gradient.

Authors:  Roey Angel; M Ines M Soares; Eugene D Ungar; Osnat Gillor
Journal:  ISME J       Date:  2009-12-24       Impact factor: 10.302

4.  Effect of biological soil crusts on soil elemental concentrations: implications for biogeochemistry and as traceable biosignatures of ancient life on land.

Authors:  H Beraldi-Campesi; H E Hartnett; A Anbar; G W Gordon; F Garcia-Pichel
Journal:  Geobiology       Date:  2009-06       Impact factor: 4.407

5.  Variation in Biological Soil Crust Bacterial Abundance and Diversity as a Function of Climate in Cold Steppe Ecosystems in the Intermountain West, USA.

Authors:  Erika S Blay; Stacy G Schwabedissen; Timothy S Magnuson; Ken A Aho; Peter P Sheridan; Kathleen A Lohse
Journal:  Microb Ecol       Date:  2017-04-13       Impact factor: 4.552

6.  Diversity of extremophilic bacteria in the sediment of high-altitude lakes located in the mountain desert of Ojos del Salado volcano, Dry-Andes.

Authors:  Júlia Margit Aszalós; Gergely Krett; Dóra Anda; Károly Márialigeti; Balázs Nagy; Andrea K Borsodi
Journal:  Extremophiles       Date:  2016-06-17       Impact factor: 2.395

7.  Responses of soil microbial communities to nutrient limitation in the desert-grassland ecological transition zone.

Authors:  Yongxing Cui; Linchuan Fang; Xiaobin Guo; Xia Wang; Yunqiang Wang; Pengfei Li; Yanjiang Zhang; Xingchang Zhang
Journal:  Sci Total Environ       Date:  2018-06-18       Impact factor: 7.963

8.  QIIME allows analysis of high-throughput community sequencing data.

Authors:  J Gregory Caporaso; Justin Kuczynski; Jesse Stombaugh; Kyle Bittinger; Frederic D Bushman; Elizabeth K Costello; Noah Fierer; Antonio Gonzalez Peña; Julia K Goodrich; Jeffrey I Gordon; Gavin A Huttley; Scott T Kelley; Dan Knights; Jeremy E Koenig; Ruth E Ley; Catherine A Lozupone; Daniel McDonald; Brian D Muegge; Meg Pirrung; Jens Reeder; Joel R Sevinsky; Peter J Turnbaugh; William A Walters; Jeremy Widmann; Tanya Yatsunenko; Jesse Zaneveld; Rob Knight
Journal:  Nat Methods       Date:  2010-04-11       Impact factor: 28.547

Review 9.  The rhizosphere microbiome and plant health.

Authors:  Roeland L Berendsen; Corné M J Pieterse; Peter A H M Bakker
Journal:  Trends Plant Sci       Date:  2012-05-05       Impact factor: 18.313

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  1 in total

1.  High Proportions of Radiation-Resistant Strains in Culturable Bacteria from the Taklimakan Desert.

Authors:  Yang Liu; Tuo Chen; Juan Li; Minghui Wu; Guangxiu Liu; Wei Zhang; Binglin Zhang; Songlin Zhang; Gaosen Zhang
Journal:  Biology (Basel)       Date:  2022-03-24
  1 in total

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