Literature DB >> 33730056

Cryo-EM reveals a previously unrecognized structural protein of a dsRNA virus implicated in its extracellular transmission.

Qianqian Shao1, Xudong Jia1, Yuanzhu Gao1, Zhe Liu2, Huan Zhang2, Qiqi Tan2, Xin Zhang2, Huiqiong Zhou2, Yinyin Li1, Qinfen Zhang1.   

Abstract

Mosquito viruses cause unpredictable outbreaks of disease. Recently, several unassigned viruses isolated from mosquitoes, including the Omono River virus (OmRV), were identified as totivirus-like viruses, with features similar to those of the Totiviridae family. Most reported members of this family infect fungi or protozoans and lack an extracellular life cycle stage. Here, we identified a new strain of OmRV and determined high-resolution structures for this virus using single-particle cryo-electron microscopy. The structures feature an unexpected protrusion at the five-fold vertex of the capsid. Disassociation of the protrusion could result in several conformational changes in the major capsid. All these structures, together with some biological results, suggest the protrusions' associations with the extracellular transmission of OmRV.

Entities:  

Year:  2021        PMID: 33730056      PMCID: PMC7968656          DOI: 10.1371/journal.ppat.1009396

Source DB:  PubMed          Journal:  PLoS Pathog        ISSN: 1553-7366            Impact factor:   6.823


  57 in total

1.  Local average intensity-based method for identifying spherical particles in electron micrographs.

Authors:  T Kivioja; J Ravantti; A Verkhovsky; E Ukkonen; D Bamford
Journal:  J Struct Biol       Date:  2000-08       Impact factor: 2.867

2.  Cardiomyopathy syndrome of atlantic salmon (Salmo salar L.) is caused by a double-stranded RNA virus of the Totiviridae family.

Authors:  Oyvind Haugland; Aase B Mikalsen; Pål Nilsen; Karine Lindmo; Beate J Thu; Trygve M Eliassen; Norbert Roos; Marit Rode; Oystein Evensen
Journal:  J Virol       Date:  2011-03-16       Impact factor: 5.103

3.  A triple beta-spiral in the adenovirus fibre shaft reveals a new structural motif for a fibrous protein.

Authors:  M J van Raaij; A Mitraki; G Lavigne; S Cusack
Journal:  Nature       Date:  1999-10-28       Impact factor: 49.962

4.  Three-dimensional structure of a protozoal double-stranded RNA virus that infects the enteric pathogen Giardia lamblia.

Authors:  Mandy E W Janssen; Yuko Takagi; Kristin N Parent; Giovanni Cardone; Max L Nibert; Timothy S Baker
Journal:  J Virol       Date:  2014-11-05       Impact factor: 5.103

5.  Victorivirus, a new genus of fungal viruses in the family Totiviridae.

Authors:  Said A Ghabrial; Max L Nibert
Journal:  Arch Virol       Date:  2008-12-24       Impact factor: 2.574

6.  The atomic structure of rice dwarf virus reveals the self-assembly mechanism of component proteins.

Authors:  Atsushi Nakagawa; Naoyuki Miyazaki; Junichiro Taka; Hisashi Naitow; Akira Ogawa; Zui Fujimoto; Hiroshi Mizuno; Takahiko Higashi; Yasuo Watanabe; Toshihiro Omura; R Holland Cheng; Tomitake Tsukihara
Journal:  Structure       Date:  2003-10       Impact factor: 5.006

7.  Acquisition of functions on the outer capsid surface during evolution of double-stranded RNA fungal viruses.

Authors:  Carlos P Mata; Daniel Luque; Josué Gómez-Blanco; Javier M Rodríguez; José M González; Nobuhiro Suzuki; Said A Ghabrial; José L Carrascosa; Benes L Trus; José R Castón
Journal:  PLoS Pathog       Date:  2017-12-08       Impact factor: 6.823

8.  fastp: an ultra-fast all-in-one FASTQ preprocessor.

Authors:  Shifu Chen; Yanqing Zhou; Yaru Chen; Jia Gu
Journal:  Bioinformatics       Date:  2018-09-01       Impact factor: 6.937

9.  New tools for automated high-resolution cryo-EM structure determination in RELION-3.

Authors:  Jasenko Zivanov; Takanori Nakane; Björn O Forsberg; Dari Kimanius; Wim Jh Hagen; Erik Lindahl; Sjors Hw Scheres
Journal:  Elife       Date:  2018-11-09       Impact factor: 8.140

10.  Potential for Co-Infection of a Mosquito-Specific Flavivirus, Nhumirim Virus, to Block West Nile Virus Transmission in Mosquitoes.

Authors:  Silvina Goenaga; Joan L Kenney; Nisha K Duggal; Mark Delorey; Gregory D Ebel; Bo Zhang; Silvana C Levis; Delia A Enria; Aaron C Brault
Journal:  Viruses       Date:  2015-11-11       Impact factor: 5.048

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  3 in total

Review 1.  Characterization of Two Novel Toti-Like Viruses Co-infecting the Atlantic Blue Crab, Callinectes sapidus, in Its Northern Range of the United States.

Authors:  Mingli Zhao; Lan Xu; Holly Bowers; Eric J Schott
Journal:  Front Microbiol       Date:  2022-03-03       Impact factor: 5.640

2.  Structures of L-BC virus and its open particle provide insight into Totivirus capsid assembly.

Authors:  Danyil Grybchuk; Michaela Procházková; Tibor Füzik; Aleksandras Konovalovas; Saulius Serva; Vyacheslav Yurchenko; Pavel Plevka
Journal:  Commun Biol       Date:  2022-08-20

3.  The Characterization of a Novel Virus Discovered in the Yeast Pichia membranifaciens.

Authors:  Mark D Lee; Jack W Creagh; Lance R Fredericks; Angela M Crabtree; Jagdish Suresh Patel; Paul A Rowley
Journal:  Viruses       Date:  2022-03-13       Impact factor: 5.048

  3 in total

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