| Literature DB >> 33723512 |
Mar Masiá1,2, Marta Fernández-González1, Manuel Sánchez3, Mar Carvajal1, José Alberto García1, Nieves Gonzalo-Jiménez4, Victoria Ortiz de la Tabla5, Vanesa Agulló1, Inmaculada Candela6, Jorge Guijarro7, José Antonio Gutiérrez8, Carlos de Gregorio3, Félix Gutiérrez1,2.
Abstract
BACKGROUND: Performance of point-of-care tests in different clinical scenarios and on different samples remains undetermined. We comprehensively evaluated the performance of the nasopharyngeal Panbio COVID-19 Ag Rapid Test Device.Entities:
Keywords: COVID-19; Panbio; SARS-CoV-2; antigen; point-of-care
Year: 2021 PMID: 33723512 PMCID: PMC7928615 DOI: 10.1093/ofid/ofab059
Source DB: PubMed Journal: Open Forum Infect Dis ISSN: 2328-8957 Impact factor: 3.835
Clinical Characteristics of the Patients
| Variable | All Patients N = 913 | Symptomatic N = 617 | Asymptomatic N = 296 |
|
|---|---|---|---|---|
| Age (years) median (Q1–Q3) | 40.6 (23–55.6) | 41 (24–56.3) | 39.9 (20.4–52.5) | .086 |
| Sex (men) | 423 (46.3) | 289 (46.8) | 134 (45.3) | .671 |
| Dyslipidemia | 80 (22.2) | 63 (24.3) | 17 (16.7) | .124 |
| Hypertension | 124 (17.0) | 96 (19.0) | 28 (12.4) | .033 |
| Diabetes | 60 (8.2) | 49 (9.7) | 11 (4.9) | .029 |
| Cardiomyopathy | 55 (7.6) | 43 (8.5) | 12 (5.3) | .171 |
| Obesity | 42 (5.8) | 25 (5.1) | 17 (7.6) | .228 |
| COPD | 25 (3.4) | 20 (4.0) | 5 (2.2) | .277 |
| Active cancer | 17 (2.3) | 14 (2.8) | 3 (1.3) | .295 |
| Primary care center | 690 (75.6) | 416 (67.4) | 274 (92.6) | <.001 |
| Emergency department | 223 (24.4) | 201 (32.6) | 22 (7.4) | <.001 |
| Positive SARS-CoV-2 RNAa | 196 (21.5) | 156 (25.3) | 40 (13.5) | <.001 |
| Ct, median (Q1–Q3) | 24 (16–30) | 22 (16–29) | 28 (21–32) | .012 |
| Ct 0–20 | 78 (40.0) | 68 (43.9) | 10 (25.0) | .10 |
| Ct 21–25 | 29 (14.9) | 24 (15.5) | 5 (12.5) | |
| Ct 26–30 | 40 (20.5) | 28 (18.1) | 12 (30.0) | |
| Ct 31–35 | 40 (20.5) | 30 (19.4) | 10 (25.0) | |
| Ct >35 | 8 (4.1) | 5 (3.2) | 3 (7.5) | |
| Positive antigen (any NP-nasal-saliva) result | 120 (13.1) | 106 (17.2) | 14 (4.7) | <.001 |
| Positive NP antigen result | 118 (12.9) | 105 (17.2) | 13 (4.5) | <.001 |
| No. of days with symptoms | 3 (2–5) | |||
| Cough | 309 (50.1) | |||
| Fever | 289 (46.8) | |||
| Sore throat | 196 (31.9) | |||
| Nasal congestion | 193 (31.3) | |||
| Dyspnea | 115 (18.6) | |||
| Anosmia/ageusia | 53 (8.8)/44 (7.1) | |||
| Others: malaise/headache | 104 (17)/140 (23) |
Abbreviations: COPD, chronic obstructive pulmonary disease; Ct, cycle threshold of reverse-transcription polymerase chain reaction; NP, nasopharyngeal; RNA, ribonucleic acid; SARS-CoV-2, severe acute respiratory syndrome coronavirus 2.
NOTE: Categorical variables are represented by number and (%).
aPerformed on nasopharyngeal samples.
Figure 1.Performance of Panbio COVID-19 Ag Rapid Test Device by type of sample.
Performance of the Panbio COVID-19 Antigen Rapid Test Device by Type of Sample and Site of Care
| Variable | TP | FP | TN | FN | PPA (95% CI) | NPA (95% CI) | OPA (95% CI) | Kappa (95% CI) |
|---|---|---|---|---|---|---|---|---|
| Type of Sample | ||||||||
| NP sample | 118 | 0 | 709 | 77 | 60.5% (53.3–67.4) | 100% (99.3–100) | 91.5% (89.4–93.2) | 0.71 (0.65–0.77) |
| Nasal sample | 59 | 0 | 527 | 73 | 44.7% (36.1–53.6) | 100% (99.1–100) | 88.9% (86.2–91.2) | 0.56 (0.48–0.65) |
| Saliva sample | 28 | 0 | 490 | 93 | 23.1% (16.2–31.9) | 100% (99–100) | 84.8% (81.6–87.6) | 0.33 (0.23–0.42) |
| Site of Care | ||||||||
| Primary care | 78 | 0 | 544 | 59 | 56.9% (48.2–65.3) | 100% (99.1–100) | 91.3% (88.9–93.3) | 0.68 (0.60–0.75) |
| Emergency department | 40 | 0 | 165 | 18 | 69% (55.3–80.1) | 100% (97.2–100) | 91.9% (87.3–95) | 0.77 (0.67–0.87) |
Abbreviations: CI, confidence interval; COVID-19, coronavirus disease 2019; FN, false negative; FP, false positive; NP, nasopharyngeal; NPA, negative percent agreement; OPA, overall predictive agreement; PPA, positive percent agreement; TN, true negative; TP, true positive; y, year.
NOTE: Unless specified, all analyses have been performed in NP samples.
Figure 2.Performance of nasopharyngeal Panbio COVID-19 Ag Rapid Test Device in different scenarios. (A) Performance according to cycle threshold (Ct) values. (B) Performance according to age.
Performance of the Panbio COVID-19 Antigen Rapid Test Device in Nasopharyngeal Samples According to Different Factors
| Variable | TP | FP | TN | FN | PPA (95% CI) | NPA (95% CI) | OPA (95% CI) | Kappa (95% CI) |
|---|---|---|---|---|---|---|---|---|
| Sex | ||||||||
| Men | 64 | 0 | 317 | 37 | 63.4% (53.1–72.6) | 100% (98.5–100) | 91.1% (87.9–93.6) | 0.72 (0.64–0.81) |
| Women | 54 | 0 | 392 | 40 | 57.4% (46.8–67.5) | 100% (98.8–100) | 91.8% (88.9–94) | 0.69 (0.60–0.77) |
| Age | ||||||||
| ≤14 y | 10 | 0 | 107 | 8 | 55.6% (31.3–77.6) | 100% (95.7–100) | 93.6% (87.4–97) | 0.68 (0.48–0.88) |
| 15–30 y | 16 | 0 | 145 | 26 | 38.1% (24–54.3) | 100% (96.8–100) | 86.1% (80.1–90.6) | 0.49 (0.33–0.65) |
| 31–50 y | 42 | 0 | 244 | 27 | 60.9% (48.4–72.2) | 100% (98.1–100) | 91.4% (87.6–94.1) | 0.71 (0.61–0.81) |
| 51–65 y | 29 | 0 | 111 | 8 | 78.4% (61.3–89.6) | 100% (95.8–100) | 94.6% (89.3–97.5) | 0.85 (0.74–0.95) |
| >65 y | 21 | 0 | 102 | 8 | 72.4% (52.5–86.6) | 100% (95.5–100) | 93.9% (87.9–97.1) | 0.80 (0.67–0.93) |
| Symptomatic | ||||||||
| Overall | 105 | 0 | 456 | 51 | 67.3% (59.3–74.5) | 100% (99–100) | 91.7% (89.1–93.7) | 0.75 (0.69–0.82) |
| ≤3 DSO | 49 | 0 | 273 | 13 | 79% (66.5–87.9) | 100% (98.3–100) | 96.1% (93.3–97.8) | 0.86 (0.79–0.93) |
| ≤4 DSO | 65 | 0 | 334 | 18 | 78.3% (67.6–86.3) | 100% (98.6–100) | 95.7% (93.1–97.3) | 0.85 (0.79–0.92) |
| ≤5 DSO | 76 | 0 | 364 | 22 | 77.6% (67.8–85.1) | 100% (98.7–100) | 95.2% (92.8–96.9) | 0.85 (0.78–0.91) |
| ≤6 DSO | 81 | 0 | 382 | 23 | 77.9% (68.5–85.2) | 100% (98.8–100) | 95.3% (92.9–96.9) | 0.85 (0.79–0.91) |
| ≥7 DSO | 24 | 0 | 74 | 28 | 46.2% (32.5–60.4) | 100% (93.9–100) | 77.8% (69.3–84.5) | 0.50 (0.36–0.64) |
| Ct ≤25 | 87 | 0 | 0 | 5 | 95% (87–98) | |||
| Ct ≤30 | 102 | 0 | 0 | 18 | 85% (77–91) | |||
| Ct ≤35 | 105 | 0 | 0 | 45 | 70% (62–77) | |||
| Asymptomatic | ||||||||
| Overall | 13 | 0 | 253 | 26 | 33.3% (19.6–50.3) | 100% (98.1–100) | 91.1% (87.1–94) | 0.46 (0.30–0.63) |
| Ct ≤25 | 12 | 0 | 0 | 2 | 86% (56–97) | |||
| Ct ≤30 | 13 | 0 | 0 | 13 | 50% (32–68) | |||
| Ct ≤35 | 13 | 0 | 0 | 23 | 36% (21–54) |
Abbreviations: CI, confidence interval; COVID-19, coronavirus disease 2019; Ct, cycle threshold of reverse-transcription polymerase chain reaction; DSO, days from symptom onset; FN, false negative; FP, false positive; PPA, positive percent agreement; NPA, negative percent agreement; OPA, overall predictive agreement; TN, true negative; TP, true positive; y, year.
NOTE: Unless specified, all analyses have been performed in nasopharyngeal samples.
Figure 3.Performance of nasopharyngeal Panbio COVID-19 Ag Rapid Test Device after stratification for different factors. (A) Performance stratified by the presence of symptoms, age, and cycle threshold (Ct) values. (B) Performance stratified by symptom duration and age.