Literature DB >> 33723323

A Raman algorithm to estimate human age from protein structural variations in autopsy skin samples: a protein biological clock.

Daisuke Miyamori1, Takeshi Uemura1, Wenliang Zhu2, Kei Fujikawa3, Takaaki Nakaya4, Satoshi Teramukai5, Giuseppe Pezzotti6, Hiroshi Ikegaya7.   

Abstract

The recent increase of the number of unidentified cadavers has become a serious problem throughout the world. As a simple and objective method for age estimation, we attempted to utilize Raman spectrometry for forensic identification. Raman spectroscopy is an optical-based vibrational spectroscopic technique that provides detailed information regarding a sample's molecular composition and structures. Building upon our previous proof-of-concept study, we measured the Raman spectra of abdominal skin samples from 132 autopsy cases and the protein-folding intensity ratio, RPF, defined as the ratio between the Raman signals from a random coil an α-helix. There was a strong negative correlation between age and RPF with a Pearson correlation coefficient of r = 0.878. Four models, based on linear (RPF), squared (RPF2), sex, and RPF by sex interaction terms, were examined. The results of cross validation suggested that the second model including linear and squared terms was the best model with the lowest root mean squared error (11.3 years of age) and the highest coefficient of determination (0.743). Our results indicate that the there was a high correlation between the age and RPF and the Raman biological clock of protein folding can be used as a simple and objective forensic age estimation method for unidentified cadavers.

Entities:  

Mesh:

Substances:

Year:  2021        PMID: 33723323      PMCID: PMC7960715          DOI: 10.1038/s41598-021-85371-7

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  39 in total

1.  Skeletal age at death: the reliability of cranial and pubic age indicators.

Authors:  S T BROOKS
Journal:  Am J Phys Anthropol       Date:  1955-12       Impact factor: 2.868

Review 2.  Cellular senescence in cancer and aging.

Authors:  Manuel Collado; Maria A Blasco; Manuel Serrano
Journal:  Cell       Date:  2007-07-27       Impact factor: 41.582

Review 3.  The problem of aging human remains and living individuals: a review.

Authors:  E Cunha; E Baccino; L Martrille; F Ramsthaler; J Prieto; Y Schuliar; N Lynnerup; C Cattaneo
Journal:  Forensic Sci Int       Date:  2009-10-29       Impact factor: 2.395

4.  Age estimation based on visual parameters of the skin of cadavers.

Authors:  Hajime Tsuboi; Isao Yokota; Daisuke Miyamori; Yoshihisa Akasaka; Ayumu Yamada; Hiroshi Ikegaya
Journal:  Skin Res Technol       Date:  2019-02-15       Impact factor: 2.365

5.  On the quantitative interpretation of biomembrane structure by Raman spectroscopy.

Authors:  B P Gaber; W L Peticolas
Journal:  Biochim Biophys Acta       Date:  1977-03-01

6.  New model for dental age estimation: Willems method applied on fewer than seven mandibular teeth.

Authors:  Ivan Bedek; Jelena Dumančić; Tomislav Lauc; Miljenko Marušić; Ivana Čuković-Bagić
Journal:  Int J Legal Med       Date:  2019-04-30       Impact factor: 2.686

7.  Raman spectroscopy of human skin: looking for a quantitative algorithm to reliably estimate human age.

Authors:  Giuseppe Pezzotti; Marco Boffelli; Daisuke Miyamori; Takeshi Uemura; Yoshinori Marunaka; Wenliang Zhu; Hiroshi Ikegaya
Journal:  J Biomed Opt       Date:  2015-06       Impact factor: 3.170

8.  Elevated germline mutation rate in teenage fathers.

Authors:  Peter Forster; Carsten Hohoff; Bettina Dunkelmann; Marianne Schürenkamp; Heidi Pfeiffer; Franz Neuhuber; Bernd Brinkmann
Journal:  Proc Biol Sci       Date:  2015-03-22       Impact factor: 5.349

9.  Accelerated epigenetic aging in Down syndrome.

Authors:  Steve Horvath; Paolo Garagnani; Maria Giulia Bacalini; Chiara Pirazzini; Stefano Salvioli; Davide Gentilini; Anna Maria Di Blasio; Cristina Giuliani; Spencer Tung; Harry V Vinters; Claudio Franceschi
Journal:  Aging Cell       Date:  2015-02-09       Impact factor: 9.304

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.