Literature DB >> 33722273

Saccharide analysis of onion outer epidermal walls.

Liza A Wilson1, Fabien Deligey2, Tuo Wang2, Daniel J Cosgrove3.   

Abstract

BACKGROUND: Epidermal cell walls have special structural and biological roles in the life of the plant. Typically they are multi-ply structures encrusted with waxes and cutin which protect the plant from dehydration and pathogen attack. These characteristics may also reduce chemical and enzymatic deconstruction of the wall for sugar analysis and conversion to biofuels. We have assessed the saccharide composition of the outer epidermal wall of onion scales with different analytical methods. This wall is a particularly useful model for cell wall imaging and mechanics.
RESULTS: Epidermal walls were depolymerized by acidic methanolysis combined with 2M trifluoracetic acid hydrolysis and the resultant sugars were analyzed by high-performance anion-exchange chromatography with pulsed amperometric detection (HPAEC-PAD). Total sugar yields based on wall dry weight were low (53%). Removal of waxes with chloroform increased the sugar yields to 73% and enzymatic digestion did not improve these yields. Analysis by gas chromatography/mass spectrometry (GC/MS) of per-O-trimethylsilyl (TMS) derivatives of the sugar methyl glycosides produced by acidic methanolysis gave a high yield for galacturonic acid (GalA) but glucose (Glc) was severely reduced. In a complementary fashion, GC/MS analysis of methyl alditols produced by permethylation gave substantial yields for glucose and other neutral sugars, but GalA was severely reduced. Analysis of the walls by 13C solid-state NMR confirmed and extended these results and revealed 15% lipid content after chloroform extraction (potentially cutin and unextractable waxes).
CONCLUSIONS: Although exact values vary with the analytical method, our best estimate is that polysaccharide in the outer epidermal wall of onion scales is comprised of homogalacturonan (~ 50%), cellulose (~ 20%), galactan (~ 10%), xyloglucan (~ 10%) and smaller amounts of other polysaccharides. Low yields of specific monosaccharides by some methods may be exaggerated in epidermal walls impregnated with waxes and cutin and call for cautious interpretation of the results.

Entities:  

Keywords:  Cuticle; Gas chromatography/mass spectrometry; High-performance anion-exchange chromatography; Methanolysis/trifluoracetic acid hydrolysis; Monosaccharide analysis; Onion epidermal wall; Pulsed amperometric detection; Solid-state NMR

Year:  2021        PMID: 33722273      PMCID: PMC7962260          DOI: 10.1186/s13068-021-01923-z

Source DB:  PubMed          Journal:  Biotechnol Biofuels        ISSN: 1754-6834            Impact factor:   6.040


  43 in total

1.  Analysis of biomass sugars and galacturonic acid by gradient anion exchange chromatography and pulsed amperometric detection without post-column addition.

Authors:  Wilbur Widmer
Journal:  Biotechnol Lett       Date:  2010-10-27       Impact factor: 2.461

2.  Quantitative solid-state 13C NMR with signal enhancement by multiple cross polarization.

Authors:  Robert L Johnson; Klaus Schmidt-Rohr
Journal:  J Magn Reson       Date:  2013-11-27       Impact factor: 2.229

3.  CCMRD: a solid-state NMR database for complex carbohydrates.

Authors:  Xue Kang; Wancheng Zhao; Malitha C Dickwella Widanage; Alex Kirui; Uluc Ozdenvar; Tuo Wang
Journal:  J Biomol NMR       Date:  2020-03-03       Impact factor: 2.835

4.  Physicochemical characteristics of onion (Allium cepa L.) tissues.

Authors:  A Ng; M L Parker; A J Parr; P K Saunders; A C Smith; K W Waldron
Journal:  J Agric Food Chem       Date:  2000-11       Impact factor: 5.279

5.  The Target of β-Expansin EXPB1 in Maize Cell Walls from Binding and Solid-State NMR Studies.

Authors:  Tuo Wang; Yuning Chen; Akira Tabuchi; Daniel J Cosgrove; Mei Hong
Journal:  Plant Physiol       Date:  2016-10-11       Impact factor: 8.340

6.  Onion epidermis as a new model to study the control of growth anisotropy in higher plants.

Authors:  Dmitry Suslov; Jean-Pierre Verbelen; Kris Vissenberg
Journal:  J Exp Bot       Date:  2009-08-14       Impact factor: 6.992

7.  Ultrastructure of the Epidermal Cell Wall and Cuticle of Tomato Fruit (Solanum lycopersicum L.) during Development.

Authors:  Patricia Segado; Eva Domínguez; Antonio Heredia
Journal:  Plant Physiol       Date:  2015-12-14       Impact factor: 8.340

8.  An improved methodology for the quantification of uronic acid units in xylans and other polysaccharides.

Authors:  Jiebing Li; Koki Kisara; Sverker Danielsson; Mikael E Lindström; Göran Gellerstedt
Journal:  Carbohydr Res       Date:  2007-04-21       Impact factor: 2.104

9.  Synthesis of very-long-chain fatty acids in the epidermis controls plant organ growth by restricting cell proliferation.

Authors:  Takashi Nobusawa; Yoko Okushima; Noriko Nagata; Mikiko Kojima; Hitoshi Sakakibara; Masaaki Umeda
Journal:  PLoS Biol       Date:  2013-04-09       Impact factor: 8.029

10.  Working towards recalcitrance mechanisms: increased xylan and homogalacturonan production by overexpression of GAlactUronosylTransferase12 (GAUT12) causes increased recalcitrance and decreased growth in Populus.

Authors:  Ajaya K Biswal; Melani A Atmodjo; Sivakumar Pattathil; Robert A Amos; Xiaohan Yang; Kim Winkeler; Cassandra Collins; Sushree S Mohanty; David Ryno; Li Tan; Ivana Gelineo-Albersheim; Kimberly Hunt; Robert W Sykes; Geoffrey B Turner; Angela Ziebell; Mark F Davis; Stephen R Decker; Michael G Hahn; Debra Mohnen
Journal:  Biotechnol Biofuels       Date:  2018-01-17       Impact factor: 6.040

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  5 in total

Review 1.  Solid-State NMR Investigations of Extracellular Matrixes and Cell Walls of Algae, Bacteria, Fungi, and Plants.

Authors:  Nader Ghassemi; Alexandre Poulhazan; Fabien Deligey; Frederic Mentink-Vigier; Isabelle Marcotte; Tuo Wang
Journal:  Chem Rev       Date:  2021-12-08       Impact factor: 72.087

2.  Building an extensible cell wall.

Authors:  Daniel J Cosgrove
Journal:  Plant Physiol       Date:  2022-06-27       Impact factor: 8.005

3.  Identification and Quantification of Glycans in Whole Cells: Architecture of Microalgal Polysaccharides Described by Solid-State Nuclear Magnetic Resonance.

Authors:  Alexandre Poulhazan; Malitha C Dickwella Widanage; Artur Muszyński; Alexandre A Arnold; Dror E Warschawski; Parastoo Azadi; Isabelle Marcotte; Tuo Wang
Journal:  J Am Chem Soc       Date:  2021-11-04       Impact factor: 15.419

4.  Cryo-electron tomography of the onion cell wall shows bimodally oriented cellulose fibers and reticulated homogalacturonan networks.

Authors:  William J Nicolas; Florian Fäßler; Przemysław Dutka; Florian K M Schur; Grant Jensen; Elliot Meyerowitz
Journal:  Curr Biol       Date:  2022-05-03       Impact factor: 10.900

5.  Biochemical characterization of Pectin Methylesterase Inhibitor 3 from Arabidopsis thaliana.

Authors:  Fan Xu; Martine Gonneau; Elvina Faucher; Olivier Habrylo; Valérie Lefebvre; Jean-Marc Domon; Marjolaine Martin; Fabien Sénéchal; Alexis Peaucelle; Jérôme Pelloux; Herman Höfte
Journal:  Cell Surf       Date:  2022-09-10
  5 in total

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