Literature DB >> 33720935

Linear-nonlinear cascades capture synaptic dynamics.

Julian Rossbroich1, Daniel Trotter2, John Beninger3, Katalin Tóth3, Richard Naud2,3.   

Abstract

Short-term synaptic dynamics differ markedly across connections and strongly regulate how action potentials communicate information. To model the range of synaptic dynamics observed in experiments, we have developed a flexible mathematical framework based on a linear-nonlinear operation. This model can capture various experimentally observed features of synaptic dynamics and different types of heteroskedasticity. Despite its conceptual simplicity, we show that it is more adaptable than previous models. Combined with a standard maximum likelihood approach, synaptic dynamics can be accurately and efficiently characterized using naturalistic stimulation patterns. These results make explicit that synaptic processing bears algorithmic similarities with information processing in convolutional neural networks.

Entities:  

Year:  2021        PMID: 33720935      PMCID: PMC7993773          DOI: 10.1371/journal.pcbi.1008013

Source DB:  PubMed          Journal:  PLoS Comput Biol        ISSN: 1553-734X            Impact factor:   4.475


  77 in total

1.  Prediction and decoding of retinal ganglion cell responses with a probabilistic spiking model.

Authors:  Jonathan W Pillow; Liam Paninski; Valerie J Uzzell; Eero P Simoncelli; E J Chichilnisky
Journal:  J Neurosci       Date:  2005-11-23       Impact factor: 6.167

2.  A dual effect of repetitive stimulation on post-tetanic potentiation of transmitter release at the frog neuromuscular junction.

Authors:  K L Magleby; J E Zengel
Journal:  J Physiol       Date:  1975-02       Impact factor: 5.182

Review 3.  Complete functional characterization of sensory neurons by system identification.

Authors:  Michael C-K Wu; Stephen V David; Jack L Gallant
Journal:  Annu Rev Neurosci       Date:  2006       Impact factor: 12.449

4.  Spike-phase coding boosts and stabilizes information carried by spatial and temporal spike patterns.

Authors:  Christoph Kayser; Marcelo A Montemurro; Nikos K Logothetis; Stefano Panzeri
Journal:  Neuron       Date:  2009-02-26       Impact factor: 17.173

5.  Target cell-specific modulation of transmitter release at terminals from a single axon.

Authors:  M Scanziani; B H Gähwiler; S Charpak
Journal:  Proc Natl Acad Sci U S A       Date:  1998-09-29       Impact factor: 11.205

Review 6.  Thalamocortical interactions.

Authors:  S Murray Sherman
Journal:  Curr Opin Neurobiol       Date:  2012-04-11       Impact factor: 6.627

7.  Dynamically interacting processes underlie synaptic plasticity in a feedback pathway.

Authors:  Anne-Marie M Oswald; John E Lewis; Leonard Maler
Journal:  J Neurophysiol       Date:  2002-05       Impact factor: 2.714

8.  Elfn1 regulates target-specific release probability at CA1-interneuron synapses.

Authors:  Emily L Sylwestrak; Anirvan Ghosh
Journal:  Science       Date:  2012-10-04       Impact factor: 47.728

9.  Synaptic Transmission Optimization Predicts Expression Loci of Long-Term Plasticity.

Authors:  Rui Ponte Costa; Zahid Padamsey; James A D'Amour; Nigel J Emptage; Robert C Froemke; Tim P Vogels
Journal:  Neuron       Date:  2017-09-27       Impact factor: 17.173

10.  High-dimensional dynamics of generalization error in neural networks.

Authors:  Madhu S Advani; Andrew M Saxe; Haim Sompolinsky
Journal:  Neural Netw       Date:  2020-09-05
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  3 in total

1.  Optimizing interneuron circuits for compartment-specific feedback inhibition.

Authors:  Joram Keijser; Henning Sprekeler
Journal:  PLoS Comput Biol       Date:  2022-04-28       Impact factor: 4.779

2.  Normalized unitary synaptic signaling of the hippocampus and entorhinal cortex predicted by deep learning of experimental recordings.

Authors:  Keivan Moradi; Zainab Aldarraji; Megha Luthra; Grey P Madison; Giorgio A Ascoli
Journal:  Commun Biol       Date:  2022-05-05

3.  Inferring stimulation induced short-term synaptic plasticity dynamics using novel dual optimization algorithm.

Authors:  Alireza Ghadimi; Leon Amadeus Steiner; Milos R Popovic; Luka Milosevic; Milad Lankarany
Journal:  PLoS One       Date:  2022-09-21       Impact factor: 3.752

  3 in total

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