Literature DB >> 33717201

Single-Cell Profiling to Explore Immunological Heterogeneity of Tumor Microenvironment in Breast Cancer.

Xiao Yuan1, Jinxi Wang2, Yixuan Huang3, Dangang Shangguan4, Peng Zhang3.   

Abstract

Immune infiltrates in the tumor microenvironment (TME) of breast cancer (BRCA) have been shown to play a critical role in tumorigenesis, progression, invasion, and therapy resistance, and thereby will affect the clinical outcomes of BRCA patients. However, a wide range of intratumoral heterogeneity shaped by the tumor cells and immune cells in the surrounding microenvironment is a major obstacle in understanding and treating BRCA. Recent progress in single-cell technologies such as single-cell RNA sequencing (scRNA-seq), mass cytometry, and digital spatial profiling has enabled the detailed characterization of intratumoral immune cells and vastly improved our understanding of less-defined cell subsets in the tumor immune environment. By measuring transcriptomes or proteomics at the single-cell level, it provides an unprecedented view of the cellular architecture consist of phenotypical and functional diversities of tumor-infiltrating immune cells. In this review, we focus on landmark studies of single-cell profiling of immunological heterogeneity in the TME, and discuss its clinical applications, translational outlook, and limitations in breast cancer studies.
Copyright © 2021 Yuan, Wang, Huang, Shangguan and Zhang.

Entities:  

Keywords:  breast cancer; immune cell; single cell mass cytometry; single-cell sequencing; tumor microenviroment

Year:  2021        PMID: 33717201      PMCID: PMC7947360          DOI: 10.3389/fimmu.2021.643692

Source DB:  PubMed          Journal:  Front Immunol        ISSN: 1664-3224            Impact factor:   7.561


  31 in total

1.  Method of the year 2013.

Authors: 
Journal:  Nat Methods       Date:  2014-01       Impact factor: 28.547

2.  Single-cell profiling of breast cancer T cells reveals a tissue-resident memory subset associated with improved prognosis.

Authors:  Peter Savas; Balaji Virassamy; Chengzhong Ye; Agus Salim; Christopher P Mintoff; Franco Caramia; Roberto Salgado; David J Byrne; Zhi L Teo; Sathana Dushyanthen; Ann Byrne; Lironne Wein; Stephen J Luen; Catherine Poliness; Sophie S Nightingale; Anita S Skandarajah; David E Gyorki; Chantel M Thornton; Paul A Beavis; Stephen B Fox; Phillip K Darcy; Terence P Speed; Laura K Mackay; Paul J Neeson; Sherene Loi
Journal:  Nat Med       Date:  2018-06-25       Impact factor: 53.440

3.  Integrated analysis of single-cell RNA-seq and bulk RNA-seq unravels tumour heterogeneity plus M2-like tumour-associated macrophage infiltration and aggressiveness in TNBC.

Authors:  Xuanwen Bao; Run Shi; Tianyu Zhao; Yanfang Wang; Natasa Anastasov; Michael Rosemann; Weijia Fang
Journal:  Cancer Immunol Immunother       Date:  2020-07-17       Impact factor: 6.968

Review 4.  Mass Cytometry: Single Cells, Many Features.

Authors:  Matthew H Spitzer; Garry P Nolan
Journal:  Cell       Date:  2016-05-05       Impact factor: 41.582

5.  Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis.

Authors:  Jacob H Levine; Erin F Simonds; Sean C Bendall; Kara L Davis; El-ad D Amir; Michelle D Tadmor; Oren Litvin; Harris G Fienberg; Astraea Jager; Eli R Zunder; Rachel Finck; Amanda L Gedman; Ina Radtke; James R Downing; Dana Pe'er; Garry P Nolan
Journal:  Cell       Date:  2015-06-18       Impact factor: 41.582

6.  Complement Signals Determine Opposite Effects of B Cells in Chemotherapy-Induced Immunity.

Authors:  Yiwen Lu; Qiyi Zhao; Jian-You Liao; Erwei Song; Qidong Xia; Jiayao Pan; Yihong Li; Jiaqian Li; Boxuan Zhou; Yingying Ye; Can Di; Shubin Yu; Yunjie Zeng; Shicheng Su
Journal:  Cell       Date:  2020-03-05       Impact factor: 41.582

7.  The single-cell pathology landscape of breast cancer.

Authors:  Hartland W Jackson; Jana R Fischer; Vito R T Zanotelli; H Raza Ali; Robert Mechera; Savas D Soysal; Holger Moch; Simone Muenst; Zsuzsanna Varga; Walter P Weber; Bernd Bodenmiller
Journal:  Nature       Date:  2020-01-20       Impact factor: 49.962

Review 8.  Understanding tumor ecosystems by single-cell sequencing: promises and limitations.

Authors:  Xianwen Ren; Boxi Kang; Zemin Zhang
Journal:  Genome Biol       Date:  2018-12-03       Impact factor: 13.583

9.  How far is single-cell sequencing from clinical application?

Authors:  Jiaqiang Zhang; William Wang; Jianan Huang; Xiangdong Wang; Yiming Zeng
Journal:  Clin Transl Med       Date:  2020-07-05

10.  CellProfiler 3.0: Next-generation image processing for biology.

Authors:  Claire McQuin; Allen Goodman; Vasiliy Chernyshev; Lee Kamentsky; Beth A Cimini; Kyle W Karhohs; Minh Doan; Liya Ding; Susanne M Rafelski; Derek Thirstrup; Winfried Wiegraebe; Shantanu Singh; Tim Becker; Juan C Caicedo; Anne E Carpenter
Journal:  PLoS Biol       Date:  2018-07-03       Impact factor: 8.029

View more
  8 in total

Review 1.  Deciphering functional tumor states at single-cell resolution.

Authors:  Rolando Vegliante; Ievgenia Pastushenko; Cédric Blanpain
Journal:  EMBO J       Date:  2021-12-17       Impact factor: 11.598

Review 2.  Multiplex Immunofluorescence and the Digital Image Analysis Workflow for Evaluation of the Tumor Immune Environment in Translational Research.

Authors:  Frank Rojas; Sharia Hernandez; Rossana Lazcano; Caddie Laberiano-Fernandez; Edwin Roger Parra
Journal:  Front Oncol       Date:  2022-06-27       Impact factor: 5.738

Review 3.  Progress and Prospect of Immunotherapy for Triple-Negative Breast Cancer.

Authors:  Chenyi Luo; Peipei Wang; Siqi He; Jingjing Zhu; Yuanyuan Shi; Jianxun Wang
Journal:  Front Oncol       Date:  2022-06-20       Impact factor: 5.738

4.  Novel Immune-Related Gene Signature for Risk Stratification and Prognosis of Survival in ER (+) and/or PR (+) and HER2 (-) Breast Cancer.

Authors:  Feng Du; Fangchao Zheng; Ying Han; Jiuda Zhao; Peng Yuan
Journal:  Front Pharmacol       Date:  2022-06-02       Impact factor: 5.988

Review 5.  Exosome-Based Nanoplatforms: The Emerging Tools for Breast Cancer Therapy.

Authors:  Quan Liu; Xian Zhang; Jun Zhang
Journal:  Front Oncol       Date:  2022-04-28       Impact factor: 5.738

Review 6.  Single-Cell RNA Sequencing in Lung Cancer: Revealing Phenotype Shaping of Stromal Cells in the Microenvironment.

Authors:  Jianhong Zhang; Chengyang Song; Ye Tian; Xueying Yang
Journal:  Front Immunol       Date:  2022-01-19       Impact factor: 7.561

Review 7.  Tumor heterogeneity reshapes the tumor microenvironment to influence drug resistance.

Authors:  Aiping Zhang; Kai Miao; Heng Sun; Chu-Xia Deng
Journal:  Int J Biol Sci       Date:  2022-04-24       Impact factor: 10.750

8.  The Combination of Zerumbone with 5-Fluorouracil for Sensitizing Colorectal Cancer-Associated Fibroblasts to Treatment.

Authors:  Sima Nobari; Rezvan Najafi; Ali Mahdavinezhad; Akram Jalali; Razieh Amini
Journal:  Evid Based Complement Alternat Med       Date:  2022-04-11       Impact factor: 2.650

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.