Literature DB >> 33713788

Rapid tilt-series method for cryo-electron tomography: Characterizing stage behavior during FISE acquisition.

Georges Chreifi1, Songye Chen2, Grant J Jensen3.   

Abstract

We and others recently developed rapid tilt-series acquisition methods for cryo-electron tomography on a Titan Krios G3i equipped with a single axis holder and a K-series direct electron detector and showed that one of these, the fast-incremental single exposure (FISE) method, significantly accelerates tilt-series acquisition when compared to traditional methods while preserving the quality of the images. Here, we characterize the behavior of our single axis holder in detail during a FISE experiment to optimally balance data quality with speed. We explain our methodology in detail so others can characterize their own stages, and conclude with recommendations for projects with different resolution goals.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Cryo-EM; Cryo-ET; FISE; K3; Tilt series; Tomography

Mesh:

Year:  2021        PMID: 33713788      PMCID: PMC8217199          DOI: 10.1016/j.jsb.2021.107716

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   3.234


  18 in total

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Authors:  M Radermacher
Journal:  J Electron Microsc Tech       Date:  1988-08

2.  MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy.

Authors:  Shawn Q Zheng; Eugene Palovcak; Jean-Paul Armache; Kliment A Verba; Yifan Cheng; David A Agard
Journal:  Nat Methods       Date:  2017-02-27       Impact factor: 28.547

3.  Limitations to significant information in biological electron microscopy as a result of radiation damage.

Authors:  R M Glaeser
Journal:  J Ultrastruct Res       Date:  1971-08

4.  In situ structure of the Legionella Dot/Icm type IV secretion system by electron cryotomography.

Authors:  Debnath Ghosal; Yi-Wei Chang; Kwangcheol C Jeong; Joseph P Vogel; Grant J Jensen
Journal:  EMBO Rep       Date:  2017-03-23       Impact factor: 8.807

5.  Architecture of the type IVa pilus machine.

Authors:  Yi-Wei Chang; Lee A Rettberg; Anke Treuner-Lange; Janet Iwasa; Lotte Søgaard-Andersen; Grant J Jensen
Journal:  Science       Date:  2016-03-10       Impact factor: 47.728

6.  CTF determination and correction for low dose tomographic tilt series.

Authors:  Quanren Xiong; Mary K Morphew; Cindi L Schwartz; Andreas H Hoenger; David N Mastronarde
Journal:  J Struct Biol       Date:  2009-09-02       Impact factor: 2.867

7.  CryoEM and computer simulations reveal a novel kinase conformational switch in bacterial chemotaxis signaling.

Authors:  C Keith Cassidy; Benjamin A Himes; Frances J Alvarez; Jun Ma; Gongpu Zhao; Juan R Perilla; Klaus Schulten; Peijun Zhang
Journal:  Elife       Date:  2015-11-19       Impact factor: 8.140

8.  The advent of structural biology in situ by single particle cryo-electron tomography.

Authors:  Jesús G Galaz-Montoya; Steven J Ludtke
Journal:  Biophys Rep       Date:  2017-05-29

9.  Improved applicability and robustness of fast cryo-electron tomography data acquisition.

Authors:  Fabian Eisenstein; Radostin Danev; Martin Pilhofer
Journal:  J Struct Biol       Date:  2019-08-16       Impact factor: 2.867

10.  Implementation of a cryo-electron tomography tilt-scheme optimized for high resolution subtomogram averaging.

Authors:  Wim J H Hagen; William Wan; John A G Briggs
Journal:  J Struct Biol       Date:  2016-06-14       Impact factor: 2.867

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  4 in total

1.  Micropatterning Transmission Electron Microscopy Grids to Direct Cell Positioning within Whole-Cell Cryo-Electron Tomography Workflows.

Authors:  Bryan S Sibert; Joseph Y Kim; Jie E Yang; Elizabeth R Wright
Journal:  J Vis Exp       Date:  2021-09-13       Impact factor: 1.424

2.  Challenges in solving structures from radiation-damaged tomograms of protein nanocrystals assessed by simulation.

Authors:  Ariana Peck; Qing Yao; Aaron S Brewster; Petrus H Zwart; John M Heumann; Nicholas K Sauter; Grant J Jensen
Journal:  Acta Crystallogr D Struct Biol       Date:  2021-04-14       Impact factor: 7.652

3.  How advances in cryo-electron tomography have contributed to our current view of bacterial cell biology.

Authors:  Janine Liedtke; Jamie S Depelteau; Ariane Briegel
Journal:  J Struct Biol X       Date:  2022-02-26

4.  A feature-guided, focused 3D signal permutation method for subtomogram averaging.

Authors:  John Jacob Peters; Jeremy Leitz; Qiang Guo; Florian Beck; Wolfgang Baumeister; Axel T Brunger
Journal:  J Struct Biol       Date:  2022-03-26       Impact factor: 3.234

  4 in total

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