Literature DB >> 33712918

Multiplex detection of blood-borne pathogens on a self-driven microfluidic chip using loop-mediated isothermal amplification.

Chunmei Xie1, Shan Chen1, Likun Zhang1, Xiangpeng He1, Yi Ma1, Haiping Wu2, Bingjie Zou3,4, Guohua Zhou5,6,7.   

Abstract

Detection of blood-borne pathogens such as hepatitis C virus (HCV), hepatitis B virus (HBV) and human immunodeficiency virus (HIV) is essential to ensure the safety of blood transfusion. However, traditional PCR-based pathogen nucleic acid detection methods require relatively high experimental facilities and are difficult to apply in areas with limited resources. In this study, a self-driven microfluidic chip was designed to carry out multiplex detection of HBV, HCV and HIV by using loop-mediated isothermal amplification (LAMP). Benefitting from the air permeability of the polydimethylsiloxane material, the chip could accomplish sample loading within 12 min driven by the pressure difference between the reaction chambers and vacuum chambers in the chip without using pumps or any injection devices. Multiplex detection is achieved by presetting LAMP primers specific to different targets in different reaction chambers. Calcein was used as an indicator to indicate the positive amplification reaction, and the result can be recorded by a smartphone camera. After 50 min of isothermal amplification at 63 °C, 2 copies/μL of HBV, HCV and HIV target nucleic acids could be detected. The results of HBV detection of 20 clinical plasma samples by using the chip are consistent with that of the qPCR-based kit, indicating that the LAMP-based self-driven chip has the clinical application potential for blood-borne pathogen detection, especially in resource-limited areas.

Entities:  

Keywords:  Blood-borne pathogens; Loop-mediated isothermal amplification; Multiplex detection; Self-driven microfluidic chip

Year:  2021        PMID: 33712918     DOI: 10.1007/s00216-021-03224-8

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  38 in total

1.  Identification of low HBV-DNA levels by nucleic acid amplification test (NAT) in blood donors.

Authors:  Stefano Dettori; Angela Candido; Loreta A Kondili; Paola Chionne; Stefania Taffon; Domenico Genovese; Paola Iudicone; Michelina Miceli; Maria Rapicetta
Journal:  J Infect       Date:  2009-06-18       Impact factor: 6.072

Review 2.  Infectivity of human immunodeficiency virus-1, hepatitis C virus, and hepatitis B virus and risk of transmission by transfusion.

Authors:  Steven H Kleinman; Nico Lelie; Michael P Busch
Journal:  Transfusion       Date:  2009-07-21       Impact factor: 3.157

3.  Prevalence, incidence, and residual risk of human immunodeficiency virus and hepatitis C virus infections among United States blood donors since the introduction of nucleic acid testing.

Authors:  Shimian Zou; Kerri A Dorsey; Edward P Notari; Gregory A Foster; David E Krysztof; Fatemeh Musavi; Roger Y Dodd; Susan L Stramer
Journal:  Transfusion       Date:  2010-03-12       Impact factor: 3.157

Review 4.  Miniaturized isothermal nucleic acid amplification, a review.

Authors:  Peter J Asiello; Antje J Baeumner
Journal:  Lab Chip       Date:  2011-03-09       Impact factor: 6.799

Review 5.  Loop-mediated isothermal amplification (LAMP): Expansion of its practical application as a tool to achieve universal health coverage.

Authors:  Yasuyoshi Mori; Tsugunori Notomi
Journal:  J Infect Chemother       Date:  2019-09-10       Impact factor: 2.211

6.  The new Xpert HCV viral load real-time PCR assay accurately quantifies hepatitis C virus RNA in serum and whole-blood specimens.

Authors:  Mélanie Wlassow; Lila Poiteau; Françoise Roudot-Thoraval; Isabelle Rosa; Alexandre Soulier; Christophe Hézode; Valérie Ortonne; Jean-Michel Pawlotsky; Stéphane Chevaliez
Journal:  J Clin Virol       Date:  2019-06-22       Impact factor: 3.168

7.  Type B hepatitis after transfusion with blood containing antibody to hepatitis B core antigen.

Authors:  J H Hoofnagle; L B Seeff; Z B Bales; H J Zimmerman
Journal:  N Engl J Med       Date:  1978-06-22       Impact factor: 91.245

8.  Detection of HIV-1 and HCV infections among antibody-negative blood donors by nucleic acid-amplification testing.

Authors:  Susan L Stramer; Simone A Glynn; Steven H Kleinman; D Michael Strong; Sally Caglioti; David J Wright; Roger Y Dodd; Michael P Busch
Journal:  N Engl J Med       Date:  2004-08-19       Impact factor: 91.245

9.  Prevalence of Hepatitis B Virus, Hepatitis C Virus, and HIV Infection Among Patients With Newly Diagnosed Cancer From Academic and Community Oncology Practices.

Authors:  Scott D Ramsey; Joseph M Unger; Laurence H Baker; Richard F Little; Rohit Loomba; Jessica P Hwang; Rashmi Chugh; Monica A Konerman; Kathryn Arnold; Alex R Menter; Eva Thomas; Ross M Michels; Carla Walker Jorgensen; Gary V Burton; Nishin A Bhadkamkar; Dawn L Hershman
Journal:  JAMA Oncol       Date:  2019-04-01       Impact factor: 31.777

10.  Performance evaluation of a laboratory developed PCR test for quantitation of HIV-2 viral RNA.

Authors:  Linda L Jagodzinski; Mark M Manak; Holly R Hack; Ying Liu; Sheila A Peel
Journal:  PLoS One       Date:  2020-02-28       Impact factor: 3.240

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  2 in total

1.  SMART-LAMP: A Smartphone-Operated Handheld Device for Real-Time Colorimetric Point-of-Care Diagnosis of Infectious Diseases via Loop-Mediated Isothermal Amplification.

Authors:  Juan García-Bernalt Diego; Pedro Fernández-Soto; Sergio Márquez-Sánchez; Daniel Santos Santos; Begoña Febrer-Sendra; Beatriz Crego-Vicente; Juan Luis Muñoz-Bellido; Moncef Belhassen-García; Juan M Corchado Rodríguez; Antonio Muro
Journal:  Biosensors (Basel)       Date:  2022-06-16

2.  Analysis and validation of silica-immobilised BST polymerase in loop-mediated isothermal amplification (LAMP) for malaria diagnosis.

Authors:  Dushanth Seevaratnam; Felix Ansah; Yaw Aniweh; Gordon A Awandare; Elizabeth A H Hall
Journal:  Anal Bioanal Chem       Date:  2022-06-03       Impact factor: 4.478

  2 in total

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