| Literature DB >> 33708890 |
Chongxiang Chen1,2, Qiaozhen Hu1, Jiaojiao Wang3, Tianmeng Wen4, Chaoyang Zhu5, Weiyan Tan5, Xuelin Chen5, Qingyu Zhao1, Wei Wang6, Huijiao Cao1, Huan Li1.
Abstract
BACKGROUND: The objective of this study was to determine the causal relationship between habitual alcohol consumption with meals and lung cancer.Entities:
Keywords: Mendelian randomization; alcohol; lung cancer
Year: 2021 PMID: 33708890 PMCID: PMC7940946 DOI: 10.21037/atm-20-3063
Source DB: PubMed Journal: Ann Transl Med ISSN: 2305-5839
Details of studies included in Mendelian randomization analyses
| Variable | Consortium | PMID | Population | Gender |
|---|---|---|---|---|
| Lung cancer | ILCCO | 24880342 | 11,348 | European |
| Habitual consumption of alcohol with meals | Neale Lab | UK BioBank | – | – |
| Obesity 1–3 (waist circumference, hip circumference, waist-to-hip ratio) | GIANT | 23563607, 25673412; | European (for obesity 1–3); mixed (waist circumference, hip circumference, waist-to-hip ratio) | Mixed |
| Triglycerides, total cholesterol | GLGC | 24097068 | Mixed | Mixed |
| Cigarettes smoking | TAG | 20418890 | European | Mixed |
ILCCO, International Lung Cancer Consortium; TAG, Tobacco, Alcohol and Genetics; GLGC, Global Lipids Genetics Consortium; GIANT, Genetic Investigation of Anthropocentric Traits.
Results from two sample MR
| Cancer | Method | Numbers of SNPs | P value | OR | 95% CI |
|---|---|---|---|---|---|
| Lung cancer | MR-Egger | 14 | 0.375 | 0.002 | 2.01E−09 to 1,355.308 |
| Weighted median | 14 | 0.034* | 0.201 | 0.046–0.885 | |
| Inverse variance weighted | 14 | 0.012* | 0.175 | 0.045–0.682 | |
| Small cell lung cancer | MR-Egger | 14 | 0.777 | 0.998 | 0.985–1.012 |
| Weighted median | 14 | 0.796 | 1.000 | 0.998–1.002 | |
| Inverse variance weighted | 14 | 0.900 | 1.000 | 0.999–1.001 | |
| Lung adenocarcinoma | MR-Egger | 14 | 0.887 | 3.108 | 7.18E−07 to 13,449,061.81 |
| Weighted median | 14 | 0.059 | 0.139 | 0.018–1.079 | |
| Inverse variance weighted | 14 | 0.078 | 0.247 | 0.052–1.169 | |
| Squamous cell lung cancer | MR-Egger | 14 | 0.149 | 2.36E−06 | 1.64E−13 to 33.966 |
| Weighted median | 14 | 0.016* | 0.065 | 0.007–0.605 | |
| Inverse variance weighted | 14 | 0.004* | 0.075 | 0.013–0.429 |
*, P value <0.05. MR, Mendelian randomization; SNPs, single nucleotide polymorphisms; OR, odds ratio; CI, confidential index.
Figure 1Forest plot of the causal effects of alcohol usually taken with meals-associated single nucleotide polymorphisms on lung cancer. MR, Mendelian randomization.
Figure 2Forest plot of the causal effects of alcohol usually taken with meals-associated single nucleotide polymorphisms on lung squamous cell cancer. MR, Mendelian randomization.
Figure 3Forest plot of the causal effects of alcohol usually taken with meals-associated single nucleotide polymorphisms on lung adenocarcinoma. MR, Mendelian randomization.
Figure 4Forest plot of the causal effects of alcohol usually taken with meals-associated single nucleotide polymorphisms on small cell lung cancer. MR, Mendelian randomization.
Figure 5Scatter plots of genetic associations with alcohol usually taken with meals against the genetic associations with lung cancer. MR, Mendelian randomization; SNP, single nucleotide polymorphism.
Heterogeneity tests
| Cancer | Method | Q | Q_df | P value |
|---|---|---|---|---|
| Lung cancer | MR-Egger | 22.379 | 12 | 0.033* |
| Inverse variance weighted | 23.229 | 13 | 0.039* | |
| Small cell lung cancer | MR-Egger | 10.322 | 12 | 0.588 |
| Inverse variance weighted | 10.414 | 13 | 0.660 | |
| Lung adenocarcinoma | MR-Egger | 12.042 | 12 | 0.442 |
| Inverse variance weighted | 12.148 | 13 | 0.516 | |
| Squamous cell lung cancer | MR-Egger | 14.548 | 12 | 0.267 |
| Inverse variance weighted | 16.411 | 13 | 0.228 |
*, P value <0.05. MR, Mendelian randomization.
Test for directional horizontal pleiotropy
| Cancer | Egger_intercept | SE | P value |
|---|---|---|---|
| Lung cancer | 0.047 | 0.070 | 0.512 |
| Small cell lung cancer | 2.10E−05 | 6.91E−05 | 0.766 |
| Lung adenocarcinoma | −0.025 | 0.078 | 0.750 |
| Squamous cell lung cancer | 0.105 | 0.084 | 0.239 |
*, P value <0.05. SE, standard error.
Test that the exposure is upstream of the outcome
| Cancer | Snp_r2. exposure | Snp_r2. outcome | Correct_causal_direction | Steiger_P value |
|---|---|---|---|---|
| Lung cancer | 0.003 | 0.001 | True | 0.007* |
| Small cell lung cancer | 0.003 | 2.31E−05 | True | <0.001* |
| Lung adenocarcinoma | 0.003 | 0.001 | True | 0.001* |
| Squamous cell lung cancer | 0.003 | 0.001 | True | 0.026* |
*, P value <0.05. SNPs, single nucleotide polymorphisms.
Two sample MR of alcohol consumption and risk factors
| Risk factors | Numbers of SNPs | P value | OR | 95% CI |
|---|---|---|---|---|
| Age of smoking initiation | 8 | 0.133 | 1.140 | 0.961–1.354 |
| BMI | 14 | <0.001* | 0.701 | 0.577–0.852 |
| Total cholesterol | 8 | 0.192 | 0.707 | 0.420–1.189 |
| Triglycerides | 8 | 0.119 | 0.762 | 0.542–1.072 |
| Cigarettes smoked per day | 8 | 0.046* | 0.002 | 3.50E−06 to 0.901 |
| Former | 8 | 0.350 | 1.778 | 0.532–5.949 |
*, P value <0.05. MR, Mendelian randomization; SNPs, single nucleotide polymorphisms; OR, odds ratio; CI, confidential index; BMI, body mass index.